Ethanol-Induced Behavioral Sensitization Alters the Synaptic Transcriptome and Exon Utilization in DBA/2J Mice
O'Brien, Megan A, Weston, Rory M, Sheth, Nihar U, Bradley, Steven, Bigbee, John, Pandey, Ashutosh, Williams, Robert W, Wolstenholme, Jennifer T, Miles, Michael F
Published in Frontiers in genetics (24.09.2018)
Published in Frontiers in genetics (24.09.2018)
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The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies
Brooks, J Paul, Edwards, David J, Harwich, Jr, Michael D, Rivera, Maria C, Fettweis, Jennifer M, Serrano, Myrna G, Reris, Robert A, Sheth, Nihar U, Huang, Bernice, Girerd, Philippe, Strauss, 3rd, Jerome F, Jefferson, Kimberly K, Buck, Gregory A
Published in BMC microbiology (21.03.2015)
Published in BMC microbiology (21.03.2015)
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Journal Article
Differences in vaginal microbiome in African American women versus women of European ancestry
Fettweis, Jennifer M, Brooks, J Paul, Serrano, Myrna G, Sheth, Nihar U, Girerd, Philippe H, Edwards, David J, Strauss, Jerome F, The Vaginal Microbiome Consortium, Jefferson, Kimberly K, Buck, Gregory A
Published in Microbiology (Society for General Microbiology) (01.10.2014)
Published in Microbiology (Society for General Microbiology) (01.10.2014)
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Journal Article
MeFiT: merging and filtering tool for illumina paired-end reads for 16S rRNA amplicon sequencing
Parikh, Hardik I, Koparde, Vishal N, Bradley, Steven P, Buck, Gregory A, Sheth, Nihar U
Published in BMC bioinformatics (01.12.2016)
Published in BMC bioinformatics (01.12.2016)
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Journal Article
Preliminary Evaluation of a Novel Neural Network-Based Hybrid Simulator for Surgical Training and Performance Assessment of Neonatal Thoracentesis
Sheth, Nihar N, Srinivasan, Nishant, Patel, Saurabhkumar, Luciano, Cristian J
Published in Simulation in healthcare : journal of the Society for Medical Simulation (01.08.2023)
Published in Simulation in healthcare : journal of the Society for Medical Simulation (01.08.2023)
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Journal Article
An emerging mycoplasma associated with trichomoniasis, vaginal infection and disease
Fettweis, Jennifer M, Serrano, Myrna G, Huang, Bernice, Brooks, J Paul, Glascock, Abigail L, Sheth, Nihar U, Strauss, 3rd, Jerome F, Jefferson, Kimberly K, Buck, Gregory A
Published in PloS one (22.10.2014)
Published in PloS one (22.10.2014)
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Journal Article
Effects of Combined Oral Contraceptives, Depot Medroxyprogesterone Acetate, and the Levonorgestrel-releasing Intrauterine System on the Vaginal Microbiome
Paul Brooks, J, Edwards, David J, Blithe, Diana L, Fettweis, Jennifer M, Serrano, Myrna G, Sheth, Nihar U, Strauss, Jerome F, Buck, Gregory A, Jefferson, Kimberly K
Published in Contraception (Stoneham) (01.04.2017)
Published in Contraception (Stoneham) (01.04.2017)
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Journal Article
Rare mutations and potentially damaging missense variants in genes encoding fibrillar collagens and proteins involved in their production are candidates for risk for preterm premature rupture of membranes
Modi, Bhavi P, Teves, Maria E, Pearson, Laurel N, Parikh, Hardik I, Chaemsaithong, Piya, Sheth, Nihar U, York, Timothy P, Romero, Roberto, Strauss, 3rd, Jerome F
Published in PloS one (27.03.2017)
Published in PloS one (27.03.2017)
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Journal Article
Association between statin use, the vaginal microbiome, and Gardnerella vaginalis vaginolysin-mediated cytotoxicity
Abdelmaksoud, Abdallah A, Girerd, Philippe H, Garcia, Erin M, Brooks, J Paul, Leftwich, Lauren M, Sheth, Nihar U, Bradley, Steven P, Serrano, Myrna G, Fettweis, Jennifer M, Huang, Bernice, Strauss, 3rd, Jerome F, Buck, Gregory A, Jefferson, Kimberly K
Published in PloS one (28.08.2017)
Published in PloS one (28.08.2017)
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Journal Article
Skin-to-Skin Care and the Development of the Preterm Infant Oral Microbiome
Hendricks-Muñoz, Karen D, Xu, Jie, Parikh, Hardik I, Xu, Ping, Fettweis, Jennifer M, Kim, Yang, Louie, Moi, Buck, Gregory A, Thacker, Leroy R, Sheth, Nihar U
Published in American journal of perinatology (01.11.2015)
Published in American journal of perinatology (01.11.2015)
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Journal Article
Comparison of Lactobacillus crispatus isolates from Lactobacillus-dominated vaginal microbiomes with isolates from microbiomes containing bacterial vaginosis-associated bacteria
Abdelmaksoud, Abdallah A, Koparde, Vishal N, Sheth, Nihar U, Serrano, Myrna G, Glascock, Abigail L, Fettweis, Jennifer M, Strauss, Jerome F, Buck, Gregory A, Jefferson, Kimberly K
Published in Microbiology (Society for General Microbiology) (01.03.2016)
Published in Microbiology (Society for General Microbiology) (01.03.2016)
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Journal Article
Second-generation shRNA libraries covering the mouse and human genomes
Elledge, Stephen J, Hannon, Gregory J, Silva, Jose M, Li, Mamie Z, Chang, Ken, Ge, Wei, Golding, Michael C, Rickles, Richard J, Siolas, Despina, Hu, Guang, Paddison, Patrick J, Schlabach, Michael R, Sheth, Nihar, Bradshaw, Jeff, Burchard, Julia, Kulkarni, Amit, Cavet, Guy, Sachidanandam, Ravi, McCombie, W Richard, Cleary, Michele A
Published in Nature genetics (01.11.2005)
Published in Nature genetics (01.11.2005)
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Dynamical system modeling to simulate donor T cell response to whole exome sequencing-derived recipient peptides: Understanding randomness in alloreactivity incidence following stem cell transplantation
Koparde, Vishal, Abdul Razzaq, Badar, Suntum, Tara, Sabo, Roy, Scalora, Allison, Serrano, Myrna, Jameson-Lee, Max, Hall, Charles, Kobulnicky, David, Sheth, Nihar, Feltz, Juliana, Contaifer, Jr, Daniel, Wijesinghe, Dayanjan, Reed, Jason, Roberts, Catherine, Qayyum, Rehan, Buck, Gregory, Neale, Michael, Toor, Amir
Published in PloS one (01.12.2017)
Published in PloS one (01.12.2017)
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Journal Article
Optimizing read mapping to reference genomes to determine composition and species prevalence in microbial communities
Martin, John, Sykes, Sean, Young, Sarah, Kota, Karthik, Sanka, Ravi, Sheth, Nihar, Orvis, Joshua, Sodergren, Erica, Wang, Zhengyuan, Weinstock, George M, Mitreva, Makedonka
Published in PloS one (13.06.2012)
Published in PloS one (13.06.2012)
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Journal Article
Whole exome sequencing to estimate alloreactivity potential between donors and recipients in stem cell transplantation
Sampson, Juliana K., Sheth, Nihar U., Koparde, Vishal N., Scalora, Allison F., Serrano, Myrna G., Lee, Vladimir, Roberts, Catherine H., Jameson‐Lee, Max, Ferreira‐Gonzalez, Andrea, Manjili, Masoud H., Buck, Gregory A., Neale, Michael C., Toor, Amir A.
Published in British journal of haematology (01.08.2014)
Published in British journal of haematology (01.08.2014)
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Journal Article
Cloning of short hairpin RNAs for gene knockdown in mammalian cells
Paddison, Patrick J, Cleary, Michele, Silva, Jose Maria, Chang, Kenneth, Sheth, Nihar, Sachidanandam, Ravi, Hannon, Gregory J
Published in Nature methods (01.11.2004)
Published in Nature methods (01.11.2004)
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Journal Article
In silico Derivation of HLA-Specific Alloreactivity Potential from Whole Exome Sequencing of Stem-Cell Transplant Donors and Recipients: Understanding the Quantitative Immunobiology of Allogeneic Transplantation
Jameson-Lee, Max, Koparde, Vishal, Griffith, Phil, Scalora, Allison F, Sampson, Juliana K, Khalid, Haniya, Sheth, Nihar U, Batalo, Michael, Serrano, Myrna G, Roberts, Catherine H, Hess, Michael L, Buck, Gregory A, Neale, Michael C, Manjili, Masoud H, Toor, Amir Ahmed
Published in Frontiers in immunology (2014)
Published in Frontiers in immunology (2014)
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Journal Article
Production of complex nucleic acid libraries using highly parallel in situ oligonucleotide synthesis
Cleary, Michele A, Hannon, Gregory J, Kilian, Kristopher, Wang, Yanqun, Bradshaw, Jeff, Cavet, Guy, Ge, Wei, Kulkarni, Amit, Paddison, Patrick J, Chang, Kenneth, Sheth, Nihar, Leproust, Eric, Coffey, Ernest M, Burchard, Julja, McCombie, W Richard, Linsley, Peter
Published in Nature methods (01.12.2004)
Published in Nature methods (01.12.2004)
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