stPlus: a reference-based method for the accurate enhancement of spatial transcriptomics
Shengquan, Chen, Boheng, Zhang, Xiaoyang, Chen, Xuegong, Zhang, Rui, Jiang
Published in Bioinformatics (12.07.2021)
Published in Bioinformatics (12.07.2021)
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Journal Article
Predicting enhancers with deep convolutional neural networks
Min, Xu, Zeng, Wanwen, Chen, Shengquan, Chen, Ning, Chen, Ting, Jiang, Rui
Published in BMC bioinformatics (01.12.2017)
Published in BMC bioinformatics (01.12.2017)
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Journal Article
RA3 is a reference-guided approach for epigenetic characterization of single cells
Chen, Shengquan, Yan, Guanao, Zhang, Wenyu, Li, Jinzhao, Jiang, Rui, Lin, Zhixiang
Published in Nature communications (12.04.2021)
Published in Nature communications (12.04.2021)
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Journal Article
scCASE: accurate and interpretable enhancement for single-cell chromatin accessibility sequencing data
Tang, Songming, Cui, Xuejian, Wang, Rongxiang, Li, Sijie, Li, Siyu, Huang, Xin, Chen, Shengquan
Published in Nature communications (22.02.2024)
Published in Nature communications (22.02.2024)
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Journal Article
DeepCAPE: A Deep Convolutional Neural Network for the Accurate Prediction of Enhancers
Chen, Shengquan, Gan, Mingxin, Lv, Hairong, Jiang, Rui
Published in Genomics, proteomics & bioinformatics (01.08.2021)
Published in Genomics, proteomics & bioinformatics (01.08.2021)
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Journal Article
SINFONIA: Scalable Identification of Spatially Variable Genes for Deciphering Spatial Domains
Jiang, Rui, Li, Zhen, Jia, Yuhang, Li, Siyu, Chen, Shengquan
Published in Cells (Basel, Switzerland) (01.02.2023)
Published in Cells (Basel, Switzerland) (01.02.2023)
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Journal Article
A GD2-aptamer-mediated, self-assembling nanomedicine for targeted multiple treatments in neuroblastoma theranostics
Zhang, Liyu, Wang, Meng, Zhu, Zeen, Chen, Shengquan, Wu, Haibin, Yang, Ying, Che, Fengyu, Li, Qiao, Li, Hui
Published in Molecular therapy. Nucleic acids (03.12.2021)
Published in Molecular therapy. Nucleic acids (03.12.2021)
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Journal Article
Novel CD123 polyaptamer hydrogel edited by Cas9/sgRNA for AML-targeted therapy
Wu, Haibin, Zhang, Liyu, Zhu, Zeen, Ding, Chenxi, Chen, Shengquan, Liu, Ruiping, Fan, Huafeng, Chen, Yang, Li, Hui
Published in Drug delivery (01.01.2021)
Published in Drug delivery (01.01.2021)
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Journal Article
Study on the correlation between radiological indicators, seven-grade classification and Oswestry disability index of surgical spinal stenosis
Chen, Guanghao, Yan, Xinxing, Huang, Tao, Wang, Pengwei, Chen, Shengquan, Yan, Jinglong
Published in Interdisciplinary neurosurgery : Advanced techniques and case management (01.09.2022)
Published in Interdisciplinary neurosurgery : Advanced techniques and case management (01.09.2022)
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Journal Article
Unfolding the genotype-to-phenotype black box of cardiovascular diseases through cross-scale modeling
Xi, Xi, Li, Haochen, Chen, Shengquan, Lv, Tingting, Ma, Tianxing, Jiang, Rui, Zhang, Ping, Wong, Wing Hung, Zhang, Xuegong
Published in iScience (19.08.2022)
Published in iScience (19.08.2022)
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Journal Article
Trends in Research of Prenatal Stress From 2011 to 2021: A Bibliometric Study
Dong, Yankai, Chen, Shengquan, Wang, Zhifei, Ma, Yao, Chen, Jinfeng, Li, Ge, Zhou, Jiahao, Ren, Yating, Ma, Hengyu, Xie, Juanping, Li, Hui, Zhu, Zhongliang
Published in Frontiers in pediatrics (06.07.2022)
Published in Frontiers in pediatrics (06.07.2022)
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Journal Article
Latent feature extraction with a prior-based self-attention framework for spatial transcriptomics
Li, Zhen, Chen, Xiaoyang, Zhang, Xuegong, Jiang, Rui, Chen, Shengquan
Published in Genome research (01.10.2023)
Published in Genome research (01.10.2023)
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