Glioma-derived IL-33 orchestrates an inflammatory brain tumor microenvironment that accelerates glioma progression
De Boeck, Astrid, Ahn, Bo Young, D’Mello, Charlotte, Lun, Xueqing, Menon, Shyam V., Alshehri, Mana M., Szulzewsky, Frank, Shen, Yaoqing, Khan, Lubaba, Dang, Ngoc Ha, Reichardt, Elliott, Goring, Kimberly-Ann, King, Jennifer, Grisdale, Cameron J., Grinshtein, Natalie, Hambardzumyan, Dolores, Reilly, Karlyne M., Blough, Michael D., Cairncross, J. Gregory, Yong, V. Wee, Marra, Marco A., Jones, Steven J. M., Kaplan, David R., McCoy, Kathy D., Holland, Eric C., Bose, Pinaki, Chan, Jennifer A., Robbins, Stephen M., Senger, Donna L.
Published in Nature communications (05.10.2020)
Published in Nature communications (05.10.2020)
Get full text
Journal Article
Homologous Recombination Deficiency and Platinum-Based Therapy Outcomes in Advanced Breast Cancer
Zhao, Eric Y, Shen, Yaoqing, Pleasance, Erin, Kasaian, Katayoon, Leelakumari, Sreeja, Jones, Martin, Bose, Pinaki, Ch'ng, Carolyn, Reisle, Caralyn, Eirew, Peter, Corbett, Richard, Mungall, Karen L, Thiessen, Nina, Ma, Yussanne, Schein, Jacqueline E, Mungall, Andrew J, Zhao, Yongjun, Moore, Richard A, Den Brok, Wendie, Wilson, Sheridan, Villa, Diego, Shenkier, Tamara, Lohrisch, Caroline, Chia, Stephen, Yip, Stephen, Gelmon, Karen, Lim, Howard, Renouf, Daniel, Sun, Sophie, Schrader, Kasmintan A, Young, Sean, Bosdet, Ian, Karsan, Aly, Laskin, Janessa, Marra, Marco A, Jones, Steven J M
Published in Clinical cancer research (15.12.2017)
Published in Clinical cancer research (15.12.2017)
Get full text
Journal Article
ETV6-NTRK3 Is Expressed in a Subset of ALK-Negative Inflammatory Myofibroblastic Tumors
Alassiri, Ali H, Ali, Rola H, Shen, Yaoqing, Lum, Amy, Strahlendorf, Caron, Deyell, Rebecca, Rassekh, Rod, Sorensen, Poul H, Laskin, Janessa, Marra, Marco, Yip, Stephen, Lee, Cheng-Han, Ng, Tony L
Published in The American journal of surgical pathology (01.08.2016)
Published in The American journal of surgical pathology (01.08.2016)
Get more information
Journal Article
Improved structural variant interpretation for hereditary cancer susceptibility using long-read sequencing
Thibodeau, My Linh, O’Neill, Kieran, Dixon, Katherine, Reisle, Caralyn, Mungall, Karen L., Krzywinski, Martin, Shen, Yaoqing, Lim, Howard J., Cheng, Dean, Tse, Kane, Wong, Tina, Chuah, Eric, Fok, Alexandra, Sun, Sophie, Renouf, Daniel, Schaeffer, David F., Cremin, Carol, Chia, Stephen, Young, Sean, Pandoh, Pawan, Pleasance, Stephen, Pleasance, Erin, Mungall, Andrew J., Moore, Richard, Yip, Stephen, Karsan, Aly, Laskin, Janessa, Marra, Marco A., Schrader, Kasmintan A., Jones, Steven J. M.
Published in Genetics in medicine (01.11.2020)
Published in Genetics in medicine (01.11.2020)
Get full text
Journal Article
RECQ-like helicases Sgs1 and BLM regulate R-loop-associated genome instability
Chang, Emily Yun-Chia, Novoa, Carolina A, Aristizabal, Maria J, Coulombe, Yan, Segovia, Romulo, Chaturvedi, Richa, Shen, Yaoqing, Keong, Christelle, Tam, Annie S, Jones, Steven J M, Masson, Jean-Yves, Kobor, Michael S, Stirling, Peter C
Published in The Journal of cell biology (04.12.2017)
Published in The Journal of cell biology (04.12.2017)
Get full text
Journal Article
Mutations in SGOL1 cause a novel cohesinopathy affecting heart and gut rhythm
Chetaille, Philippe, Preuss, Christoph, Burkhard, Silja, Côté, Jean-Marc, Houde, Christine, Castilloux, Julie, Piché, Jessica, Gosset, Natacha, Leclerc, Séverine, Wünnemann, Florian, Thibeault, Maryse, Gagnon, Carmen, Galli, Antonella, Tuck, Elizabeth, Hickson, Gilles R, Amine, Nour El, Boufaied, Ines, Lemyre, Emmanuelle, de Santa Barbara, Pascal, Faure, Sandrine, Jonzon, Anders, Cameron, Michel, Dietz, Harry C, Gallo-McFarlane, Elena, Benson, D Woodrow, Moreau, Claudia, Labuda, Damian, Zhan, Shing H, Shen, Yaoqing, Jomphe, Michèle, Jones, Steven J M, Bakkers, Jeroen, Andelfinger, Gregor
Published in Nature genetics (01.11.2014)
Published in Nature genetics (01.11.2014)
Get full text
Journal Article
A novel mutation in EED associated with overgrowth
Cohen, Ana S A, Tuysuz, Beyhan, Shen, Yaoqing, Bhalla, Sanjiv K, Jones, Steven J M, Gibson, William T
Published in Journal of human genetics (01.06.2015)
Published in Journal of human genetics (01.06.2015)
Get full text
Journal Article
Comprehensive genomic profiling of glioblastoma tumors, BTICs, and xenografts reveals stability and adaptation to growth environments
Shen, Yaoqing, Grisdale, Cameron J., Islam, Sumaiya A., Bose, Pinaki, Lever, Jake, Zhao, Eric Y., Grinshtein, Natalie, Ma, Yussanne, Mungall, Andrew J., Moore, Richard A., Lun, Xueqing, Senger, Donna L., Robbins, Stephen M., Wang, Alice Yijun, MacIsaac, Julia L., Kobor, Michael S., Luchman, H. Artee, Weiss, Samuel, Chan, Jennifer A., Blough, Michael D., Kaplan, David R., Cairncross, J. Gregory, Marra, Marco A., Jones, Steven J. M.
Published in Proceedings of the National Academy of Sciences - PNAS (17.09.2019)
Published in Proceedings of the National Academy of Sciences - PNAS (17.09.2019)
Get full text
Journal Article
Whole genome and transcriptome integrated analyses guide clinical care of pediatric poor prognosis cancers
Deyell, Rebecca J., Shen, Yaoqing, Titmuss, Emma, Dixon, Katherine, Williamson, Laura M., Pleasance, Erin, Nelson, Jessica M. T., Abbasi, Sanna, Krzywinski, Martin, Armstrong, Linlea, Bonakdar, Melika, Ch’ng, Carolyn, Chuah, Eric, Dunham, Chris, Fok, Alexandra, Jones, Martin, Lee, Anna F., Ma, Yussanne, Moore, Richard A., Mungall, Andrew J., Mungall, Karen L., Rogers, Paul C., Schrader, Kasmintan A., Virani, Alice, Wee, Kathleen, Young, Sean S., Zhao, Yongjun, Jones, Steven J. M., Laskin, Janessa, Marra, Marco A., Rassekh, Shahrad R.
Published in Nature communications (16.05.2024)
Published in Nature communications (16.05.2024)
Get full text
Journal Article
macroH2A2 antagonizes epigenetic programs of stemness in glioblastoma
Nikolic, Ana, Maule, Francesca, Bobyn, Anna, Ellestad, Katrina, Paik, Seungil, Marhon, Sajid A., Mehdipour, Parinaz, Lun, Xueqing, Chen, Huey-Miin, Mallard, Claire, Hay, Alexander J., Johnston, Michael J., Gafuik, Christopher J., Zemp, Franz J., Shen, Yaoqing, Ninkovic, Nicoletta, Osz, Katalin, Labit, Elodie, Berger, N. Daniel, Brownsey, Duncan K., Kelly, John J., Biernaskie, Jeff, Dirks, Peter B., Derksen, Darren J., Jones, Steven J. M., Senger, Donna L., Chan, Jennifer A., Mahoney, Douglas J., De Carvalho, Daniel D., Gallo, Marco
Published in Nature communications (27.05.2023)
Published in Nature communications (27.05.2023)
Get full text
Journal Article
ABT-888 restores sensitivity in temozolomide resistant glioma cells and xenografts
Yuan, Alice L, Ricks, Christian B, Bohm, Alexandra K, Lun, Xueqing, Maxwell, Lori, Safdar, Shahana, Bukhari, Shazreh, Gerber, Amanda, Sayeed, Wajid, Bering, Elizabeth A, Pedersen, Haley, Chan, Jennifer A, Shen, Yaoqing, Marra, Marco, Kaplan, David R, Mason, Warren, Goodman, Lindsey D, Ezhilarasan, Ravesanker, Kaufmann, Ascher B, Cabral, Matthew, Robbins, Steve M, Senger, Donna L, Cahill, Daniel P, Sulman, Erik P, Cairncross, J Gregory, Blough, Michael D
Published in PloS one (28.08.2018)
Published in PloS one (28.08.2018)
Get full text
Journal Article
Slow Off-Rate Modified Aptamer (SOMAmer) Proteomic Analysis of Patient-Derived Malignant Glioma Identifies Distinct Cellular Proteomes
Thanasupawat, Thatchawan, Glogowska, Aleksandra, Pascoe, Christopher, Krishnan, Sai Nivedita, Munir, Maliha, Begum, Farhana, Beiko, Jason, Krcek, Jerry, Del Bigio, Marc R., Pitz, Marshall, Shen, Yaoqing, Spicer, Victor, Coombs, Kevin M., Wilkins, John, Hombach-Klonisch, Sabine, Klonisch, Thomas
Published in International journal of molecular sciences (01.09.2021)
Published in International journal of molecular sciences (01.09.2021)
Get full text
Journal Article
Immunohistochemistry for NF2, LATS1/2, and YAP/TAZ Fails to Separate Benign From Malignant Mesothelial Proliferations
Sheffield, Brandon S, Lorette, Julie, Shen, Yaoqing, Marra, Marco A, Churg, Andrew
Published in Archives of pathology & laboratory medicine (1976) (01.05.2016)
Published in Archives of pathology & laboratory medicine (1976) (01.05.2016)
Get full text
Journal Article
Personalized oncogenomics: clinical experience with malignant peritoneal mesothelioma using whole genome sequencing
Sheffield, Brandon S, Tinker, Anna V, Shen, Yaoqing, Hwang, Harry, Li-Chang, Hector H, Pleasance, Erin, Ch'ng, Carolyn, Lum, Amy, Lorette, Julie, McConnell, Yarrow J, Sun, Sophie, Jones, Steven J M, Gown, Allen M, Huntsman, David G, Schaeffer, David F, Churg, Andrew, Yip, Stephen, Laskin, Janessa, Marra, Marco A
Published in PloS one (23.03.2015)
Published in PloS one (23.03.2015)
Get full text
Journal Article
Integrative genomic analysis of ghost cell odontogenic carcinoma
Bose, Pinaki, Pleasance, Erin D, Jones, Martin, Shen, Yaoqing, Ch’ng, Carolyn, Reisle, Caralyn, Schein, Jacqueline E, Mungall, Andrew J, Moore, Richard, Ma, Yussanne, Sheffield, Brandon S, Thomson, Thomas, Rasmussen, Steven, Ng, Tony, Yip, Stephen, Lee, Christopher W, Ho, Cheryl, Laskin, Janessa, Marra, Marco A, Jones, Steven J
Published in Oral oncology (01.09.2015)
Published in Oral oncology (01.09.2015)
Get full text
Journal Article
P658: Detection of variant parent-of-origin in diverse hereditary cancer syndromes using only the proband’s blood sample
Schrader, Kasmintan, Akbari, Vahid, Hanlon, Vincent, Leung, Tiffany, Dixon, Katherine, O’Neill, Kieran, Roston, Alexandra, Cordova, Lilian, Wong, Karen, Sharma, Alshanee, Shen, Yaoqing, Senz, Janine, Wang, Yanni, Chan, Daniel, Fok, Alexandra, Hong, Quan, Nuk, Jennifer, Coope, Robin, Chuah, Eric, Chan, Simon, Lee, Hyun-Wu, Bilobram, Steve, Zhao, Yongjun, Bala, Miruna, Mungall, Karen, Mungall, Andy, Moore, Richard, Regier, Dean, Virani, Alice, Lefebvre, Louis, Feldman, Fabio, Marra, Marco, Sun, Sophie, Yip, Stephen, Lansdorp, Peter, Jones, Steven
Published in Genetics in Medicine Open (2024)
Published in Genetics in Medicine Open (2024)
Get full text
Journal Article
Correction: Corrigendum: A novel mutation in EED associated with overgrowth
Cohen, Ana S A, Tuysuz, Beyhan, Shen, Yaoqing, Bhalla, Sanjiv K, Jones, Steven J M, Gibson, William T
Published in Journal of human genetics (01.02.2017)
Published in Journal of human genetics (01.02.2017)
Get full text
Journal Article
O35: Parent-of-origin-aware genomic analysis infers segregation of pathogenic variants in SDHD without parental data
Schrader, Kasmintan, Akbari, Vahid, Hanlon, Vincent, Dixon, Katherine, O’Neill, Kieran, Shen, Yaoqing, Sharma, Alshanee, Senz, Janine, Wang, Yanni, Chan, Daniel, Fok, Alexandra, Hong, Quan, Nuk, Jennifer, Regier, Dean, Virani, Alice, Lefebvre, Louis, Feldman, Fabio, Marra, Marco, Sun, Sophie, Yip, Stephen, Lansdorp, Peter, Jones, Steven
Published in Genetics in Medicine Open (2023)
Published in Genetics in Medicine Open (2023)
Get full text
Journal Article
Base excision repair deficiency signatures implicate germline and somatic MUTYH aberrations in pancreatic ductal adenocarcinoma and breast cancer oncogenesis
Thibodeau, My Linh, Zhao, Eric Y, Reisle, Caralyn, Ch'ng, Carolyn, Wong, Hui-Li, Shen, Yaoqing, Jones, Martin R, Lim, Howard J, Young, Sean, Cremin, Carol, Pleasance, Erin, Zhang, Wei, Holt, Robert, Eirew, Peter, Karasinska, Joanna, Kalloger, Steve E, Taylor, Greg, Majounie, Elisa, Bonakdar, Melika, Zong, Zusheng, Bleile, Dustin, Chiu, Readman, Birol, Inanc, Gelmon, Karen, Lohrisch, Caroline, Mungall, Karen L, Mungall, Andrew J, Moore, Richard, Ma, Yussanne P, Fok, Alexandra, Yip, Stephen, Karsan, Aly, Huntsman, David, Schaeffer, David F, Laskin, Janessa, Marra, Marco A, Renouf, Daniel J, Jones, Steven J M, Schrader, Kasmintan A
Published in Cold Spring Harbor molecular case studies (01.04.2019)
Published in Cold Spring Harbor molecular case studies (01.04.2019)
Get full text
Journal Article
Exome Sequencing Identifies a Novel Variant in ACTC1 Associated With Familial Atrial Septal Defect
Greenway, Steven C., MD, McLeod, Ross, MD, Hume, Stacey, PhD, Roslin, Nicole M., MSc, Alvarez, Nanette, MD, Giuffre, Michael, MD, Zhan, Shing H., BSc, Shen, Yaoqing, PhD, Preuss, Christoph, PhD, Andelfinger, Gregor, MD, PhD, Jones, Steven J.M., PhD, Gerull, Brenda, MD
Published in Canadian journal of cardiology (01.02.2014)
Published in Canadian journal of cardiology (01.02.2014)
Get full text
Journal Article