A comparative study of evaluating missing value imputation methods in label-free proteomics
Jin, Liang, Bi, Yingtao, Hu, Chenqi, Qu, Jun, Shen, Shichen, Wang, Xue, Tian, Yu
Published in Scientific reports (19.01.2021)
Published in Scientific reports (19.01.2021)
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Journal Article
Proteomics Analysis of the Polyomavirus DNA Replication Initiation Complex Reveals Novel Functional Phosphorylated Residues and Associated Proteins
Dey-Rao, Rama, Shen, Shichen, Qu, Jun, Melendy, Thomas
Published in International journal of molecular sciences (01.04.2024)
Published in International journal of molecular sciences (01.04.2024)
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Journal Article
Global Analysis of Cellular Protein Flux Quantifies the Selectivity of Basal Autophagy
Zhang, Tian, Shen, Shichen, Qu, Jun, Ghaemmaghami, Sina
Published in Cell reports (Cambridge) (15.03.2016)
Published in Cell reports (Cambridge) (15.03.2016)
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Journal Article
Regulation of local GTP availability controls RAC1 activity and cell invasion
Bianchi-Smiraglia, Anna, Wolff, David W, Marston, Daniel J, Deng, Zhiyong, Han, Zhannan, Moparthy, Sudha, Wombacher, Rebecca M, Mussell, Ashley L, Shen, Shichen, Chen, Jialin, Yun, Dong-Hyun, O'Brien Cox, Anderson, Furdui, Cristina M, Hurley, Edward, Feltri, Maria Laura, Qu, Jun, Hollis, Thomas, Kengne, Jules Berlin Nde, Fongang, Bernard, Sousa, Rui J, Kandel, Mikhail E, Kandel, Eugene S, Hahn, Klaus M, Nikiforov, Mikhail A
Published in Nature communications (19.10.2021)
Published in Nature communications (19.10.2021)
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Journal Article
Comparative Proteomics Analysis of Exosomes Identifies Key Pathways and Protein Markers Related to Breast Cancer Metastasis
Shen, Shichen, Tu, Chengjian, Shen, He, Li, Jun, Frangou, Costa, Zhang, Jianmin, Qu, Jun
Published in International journal of molecular sciences (01.02.2023)
Published in International journal of molecular sciences (01.02.2023)
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Journal Article
Comparative Proteomic Analysis of the Mitochondria-associated ER Membrane (MAM) in a Long-term Type 2 Diabetic Rodent Model
Ma, Jacey Hongjie, Shen, Shichen, Wang, Joshua J, He, Zhanwen, Poon, Amanda, Li, Jun, Qu, Jun, Zhang, Sarah X
Published in Scientific reports (18.05.2017)
Published in Scientific reports (18.05.2017)
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Journal Article
Toward Accurate and Robust Liquid Chromatography–Mass Spectrometry-Based Quantification of Antibody Biotherapeutics in Tissues
An, Bo, Zhang, Ming, Pu, Jie, Qu, Yang, Shen, Shichen, Zhou, Shaolian, Ferrari, Luca, Vazvaei, Faye, Qu, Jun
Published in Analytical chemistry (Washington) (17.11.2020)
Published in Analytical chemistry (Washington) (17.11.2020)
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Journal Article
Temporal Effects of Combined Birinapant and Paclitaxel on Pancreatic Cancer Cells Investigated via Large-Scale, Ion-Current-Based Quantitative Proteomics (IonStar)
Wang, Xue, Niu, Jin, Li, Jun, Shen, Xiaomeng, Shen, Shichen, Straubinger, Robert M., Qu, Jun
Published in Molecular & cellular proteomics (01.04.2018)
Published in Molecular & cellular proteomics (01.04.2018)
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In-depth mapping of protein localizations in whole tissue by micro-scaffold assisted spatial proteomics (MASP)
Ma, Min, Huo, Shihan, Zhang, Ming, Qian, Shuo, Zhu, Xiaoyu, Pu, Jie, Rasam, Sailee, Xue, Chao, Shen, Shichen, An, Bo, Wang, Jianmin, Qu, Jun
Published in Nature communications (14.12.2022)
Published in Nature communications (14.12.2022)
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Journal Article
Potential Neuroprotective Mechanisms of Methamphetamine Treatment in Traumatic Brain Injury Defined by Large-Scale IonStar-Based Quantitative Proteomics
Shen, Shichen, Zhang, Ming, Ma, Min, Rasam, Sailee, Poulsen, David, Qu, Jun
Published in International journal of molecular sciences (24.02.2021)
Published in International journal of molecular sciences (24.02.2021)
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Journal Article
Performance Investigation of Proteomic Identification by HCD/CID Fragmentations in Combination with High/Low-Resolution Detectors on a Tribrid, High-Field Orbitrap Instrument
Tu, Chengjian, Li, Jun, Shen, Shichen, Sheng, Quanhu, Shyr, Yu, Qu, Jun
Published in PloS one (29.07.2016)
Published in PloS one (29.07.2016)
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Journal Article
Quantitative Proteomics of Human Retinal Pigment Epithelium Reveals Key Regulators for the Pathogenesis of Age-Related Macular Degeneration
Shen, Shichen, Kapphahn, Rebecca J, Zhang, Ming, Qian, Shuo, Montezuma, Sandra R, Shang, Peng, Ferrington, Deborah A, Qu, Jun
Published in International journal of molecular sciences (01.02.2023)
Published in International journal of molecular sciences (01.02.2023)
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Journal Article
Author Correction: Regulation of local GTP availability controls RAC1 activity and cell invasion
Bianchi-Smiraglia, Anna, Wolff, David W, Marston, Daniel J, Deng, Zhiyong, Han, Zhannan, Moparthy, Sudha, Wombacher, Rebecca M, Mussell, Ashley L, Shen, Shichen, Chen, Jialin, Yun, Dong-Hyun, O'Brien Cox, Anderson, Furdui, Cristina M, Hurley, Edward, Feltri, Maria Laura, Qu, Jun, Hollis, Thomas, Kengne, Jules Berlin Nde, Fongang, Bernard, Sousa, Rui J, Kandel, Mikhail E, Kandel, Eugene S, Hahn, Klaus M, Nikiforov, Mikhail A
Published in Nature communications (05.11.2021)
Published in Nature communications (05.11.2021)
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Journal Article
Proteomic Analysis of Retinal Mitochondria-Associated ER Membranes Identified Novel Proteins of Retinal Degeneration in Long-Term Diabetes
Wang, Joshua J, Park, Karen Sophia, Dhimal, Narayan, Shen, Shichen, Tang, Xixiang, Qu, Jun, Zhang, Sarah X
Published in Cells (Basel, Switzerland) (01.09.2022)
Published in Cells (Basel, Switzerland) (01.09.2022)
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Journal Article
A Novel PDE4D Inhibitor BPN14770 Reverses Scopolamine-Induced Cognitive Deficits via cAMP/SIRT1/Akt/Bcl-2 Pathway
Wang, Yulu, Gao, Shichao, Zheng, Victor, Chen, Ling, Ma, Min, Shen, Shichen, Qu, Jun, Zhang, Hanting, Gurney, Mark E, O'Donnell, James M, Xu, Ying
Published in Frontiers in cell and developmental biology (10.12.2020)
Published in Frontiers in cell and developmental biology (10.12.2020)
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Journal Article
Cyclosporine A Modulates LSP1 Protein Levels in Human B Cells to Attenuate B Cell Migration at Low O2 Levels
Hilchey, Shannon P., Palshikar, Mukta G., Mendelson, Eric S., Shen, Shichen, Rasam, Sailee, Emo, Jason A., Qu, Jun, Thakar, Juilee, Zand, Martin S.
Published in Life (Basel, Switzerland) (22.08.2022)
Published in Life (Basel, Switzerland) (22.08.2022)
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Journal Article
Inflammasome Activation in Retinal Pigment Epithelium from Human Donors with Age-Related Macular Degeneration
Ebeling, Mara C, Fisher, Cody R, Kapphahn, Rebecca J, Stahl, Madilyn R, Shen, Shichen, Qu, Jun, Montezuma, Sandra R, Ferrington, Deborah A
Published in Cells (Basel, Switzerland) (30.06.2022)
Published in Cells (Basel, Switzerland) (30.06.2022)
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