Theoretical illumination of water-inserted structures of the CaMn4O5 cluster in the S2 and S3 states of oxygen-evolving complex of photosystem II: full geometry optimizations by B3LYP hybrid density functional
Isobe, H, Shoji, M, Yamanaka, S, Umena, Y, Kawakami, K, Kamiya, N, Shen, J-R, Yamaguchi, K
Published in Dalton transactions : an international journal of inorganic chemistry (01.01.2012)
Published in Dalton transactions : an international journal of inorganic chemistry (01.01.2012)
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Phospholipid distributions in purple phototrophic bacteria and LH1-RC core complexes
Nagatsuma, S., Gotou, K., Yamashita, T., Yu, L.-J., Shen, J.-R., Madigan, M.T., Kimura, Y., Wang-Otomo, Z.-Y.
Published in Biochimica et biophysica acta. Bioenergetics (01.06.2019)
Published in Biochimica et biophysica acta. Bioenergetics (01.06.2019)
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Does Feedback from Supermassive Black Holes Coevolve with the Host in Type 2 Quasars?
Jin, S., Wang, J., Kong, M. Z., Shen, R. J., Zhang, Y. X., Xu, D. W., Wei, J. Y., Xie, Z.
Published in The Astrophysical journal (01.06.2023)
Published in The Astrophysical journal (01.06.2023)
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The nature of chemical bonds of the CaMn4O5 cluster in oxygen evolving complex of photosystem II: Jahn-Teller distortion and its suppression by Ca doping in cubane structures
Yamaguchi, K., Yamanaka, S., Isobe, H., Saito, T., Kanda, K., Umena, Y., Kawakami, K., Shen, J.-R., Kamiya, N., Okumura, M., Nakamura, H., Shoji, M., Yoshioka, Y.
Published in International journal of quantum chemistry (15.02.2013)
Published in International journal of quantum chemistry (15.02.2013)
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Photobiological hydrogen production and artificial photosynthesis for clean energy: from bio to nanotechnologies
Nath, K., Najafpour, M. M., Voloshin, R. A., Balaghi, S. E., Tyystjärvi, E., Timilsina, R., Eaton-Rye, J. J., Tomo, T., Nam, H. G., Nishihara, H., Ramakrishna, S., Shen, J.-R., Allakhverdiev, S. I.
Published in Photosynthesis research (01.12.2015)
Published in Photosynthesis research (01.12.2015)
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Book Review
Generalized approximate spin projection calculations of effective exchange integrals of the CaMn4O5 cluster in the S1 and S3 states of the oxygen evolving complex of photosystem II
Isobe, H, Shoji, M, Yamanaka, S, Mino, H, Umena, Y, Kawakami, K, Kamiya, N, Shen, J-R, Yamaguchi, K
Published in Physical chemistry chemical physics : PCCP (28.06.2014)
Published in Physical chemistry chemical physics : PCCP (28.06.2014)
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Nanostructured manganese oxide on frozen smoke: A new water-oxidizing composite
Najafpour, M.M., Salimi, S., Balaghi, S. Esmael, Hołyńska, M., Tomo, T., Sadr, Moayad Hossaini, Soltani, Behzad, Shen, J.-R., Veziroglu, T.N., Allakhverdiev, S.I.
Published in International journal of hydrogen energy (30.01.2016)
Published in International journal of hydrogen energy (30.01.2016)
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Light-induced reversible reorganizations in closed Type II reaction centre complexes: physiological roles and physical mechanisms
Sipka, G, Nagy, L, Magyar, M, Akhtar, P, Shen, J-R, Holzwarth, A R, Lambrev, P H, Garab, G
Published in Open biology (01.12.2022)
Published in Open biology (01.12.2022)
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Possible mechanisms of water splitting reaction based on proton and electron release pathways revealed for CaMn4O5 cluster of PSII refined to 1.9 Å X-ray resolution
Saito, T., Yamanaka, S., Kanda, K., Isobe, H., Takano, Y., Shigeta, Y., Umena, Y., Kawakami, K., Shen, J.-R., Kamiya, N., Okumura, M., Shoji, M., Yoshioka, Y., Yamaguchi, K.
Published in International journal of quantum chemistry (01.01.2012)
Published in International journal of quantum chemistry (01.01.2012)
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Mutual relationships between structural and functional changes in a PsbM-deletion mutant of photosystem II
Uto, S, Kawakami, K, Umena, Y, Iwai, M, Ikeuchi, M, Shen, J-R, Kamiya, N
Published in Faraday discussions (2017)
Published in Faraday discussions (2017)
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Dependence of the rate-limiting steps in the dark-to-light transition of photosystem II on the lipidic environment of the reaction center
MAGYAR, M., AKHTAR, P., SIPKA, G., HAN, W., LI, X., HAN, G., SHEN, J.-R., LAMBREV, P.H., GARAB, G.
Published in Photosynthetica (18.03.2022)
Published in Photosynthetica (18.03.2022)
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Journal Article
Possible mechanisms for the O–O bond formation in oxygen evolution reaction at the CaMn4O5(H2O)4 cluster of PSII refined to 1.9 Å X-ray resolution
Yamanaka, S., Isobe, H., Kanda, K., Saito, T., Umena, Y., Kawakami, K., Shen, J.-R., Kamiya, N., Okumura, M., Nakamura, H., Yamaguchi, K.
Published in Chemical physics letters (01.07.2011)
Published in Chemical physics letters (01.07.2011)
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Theoretical insight in to hydrogen-bonding networks and proton wire for the CaMn4O5 cluster of photosystem II. Elongation of Mn–Mn distances with hydrogen bonds
Shoji, M., Isobe, H., Yamanaka, S., Umena, Y., Kawakami, K., Kamiya, N., Shen, J.-R., Yamaguchi, K.
Published in Catalysis science & technology (01.01.2013)
Published in Catalysis science & technology (01.01.2013)
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The deep red state of photosystem II in Cyanidioschyzon merolae
Langley, J., Morton, J., Purchase, R., Tian, L., Shen, L., Han, G., Shen, J.-R., Krausz, E.
Published in Photosynthetica (01.03.2018)
Published in Photosynthetica (01.03.2018)
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Nano-sized manganese-calcium cluster in photosystem II
Najafpour, M. M., Ghobadi, M. Z., Haghighi, B., Eaton-Rye, J. J., Tomo, T., Shen, J. -R., Allakhverdiev, S. I.
Published in Biochemistry (Moscow) (01.04.2014)
Published in Biochemistry (Moscow) (01.04.2014)
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Journal Article
Full geometry optimizations of the mixed-valence CaMn4O4X(H2O)4 (X=OH or O) cluster in OEC of PS II: Degree of symmetry breaking of the labile Mn-X-Mn bond revealed by several hybrid DFT calculations
Yamaguchi, K., Isobe, H., Yamanaka, S., Saito, T., Kanda, K., Shoji, M., Umena, Y., Kawakami, K., Shen, J.-R., Kamiya, N., Okumura, M.
Published in International journal of quantum chemistry (15.02.2013)
Published in International journal of quantum chemistry (15.02.2013)
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Journal Article
Structure and reactivity of the mixed-valence CaMn4O5(H2O)4 and CaMn4O4(OH)(H2O)4 clusters at oxygen evolution complex of photosystem II. Hybrid DFT (UB3LYP and UBHandHLYP) calculations
Yamanaka, S., Saito, T., Kanda, K., Isobe, H., Umena, Y., Kawakami, K., Shen, J.-R., Kamiya, N., Okumura, M., Nakamura, H., Yamaguchi, K.
Published in International journal of quantum chemistry (01.01.2012)
Published in International journal of quantum chemistry (01.01.2012)
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