diffReps: detecting differential chromatin modification sites from ChIP-seq data with biological replicates
Shen, Li, Shao, Ning-Yi, Liu, Xiaochuan, Maze, Ian, Feng, Jian, Nestler, Eric J
Published in PloS one (10.06.2013)
Published in PloS one (10.06.2013)
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Comparison of Non‐Coding RNAs in Exosomes and Functional Efficacy of Human Embryonic Stem Cell‐ versus Induced Pluripotent Stem Cell‐Derived Cardiomyocytes
Lee, Won Hee, Chen, Wen‐Yi, Shao, Ning‐Yi, Xiao, Dan, Qin, Xulei, Baker, Natalie, Bae, Hye Ryeong, Wei, Tzu‐Tang, Wang, Yongjun, Shukla, Praveen, Wu, Haodi, Kodo, Kazuki, Ong, Sang‐Ging, Wu, Joseph C.
Published in Stem cells (Dayton, Ohio) (01.10.2017)
Published in Stem cells (Dayton, Ohio) (01.10.2017)
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The clinical and bioinformatics analysis for the role of antihypertension drugs on mortality among patients with hypertension hospitalized with COVID‐19
Zhao, Liyang, Li, Yusi, Yi, Wenjuan, Yan, Kuo, Yang, Chao, Radhakrishnan, Sridhar, Li, Rui, Tan, Ruirong, Fan, Gang, Dai, Mengyuan, Liu, Miao, Shao, Ning‐Yi
Published in Journal of medical virology (01.10.2022)
Published in Journal of medical virology (01.10.2022)
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Minimized glycemic fluctuation decreases the risk of severe illness and death in patients with COVID‐19
Leng, Yan, Chen, Ming, Dai, Mengyuan, Wu, Yang, Lei, Shao‐qing, Yan, Kuo, Shao, Ning‐Yi, Xia, Zhongyuan, Liu, Miao
Published in Journal of medical virology (01.07.2021)
Published in Journal of medical virology (01.07.2021)
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Reply to Chan et al
Zhao, Liyang, Li, Yusi, Yi, Wenjuan, Yan, Kuo, Yang, Chao, Radhakrishnan, Sridhar, Li, Rui, Tan, Ruirong, Fan, Gang, Dai, Mengyuan, Liu, Miao, Shao, Ning‐Yi
Published in Journal of medical virology (01.01.2023)
Published in Journal of medical virology (01.01.2023)
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Effects of cellular origin on differentiation of human induced pluripotent stem cell-derived endothelial cells
Hu, Shijun, Zhao, Ming-Tao, Jahanbani, Fereshteh, Shao, Ning-Yi, Lee, Won Hee, Chen, Haodong, Snyder, Michael P, Wu, Joseph C
Published in JCI insight (02.06.2016)
Published in JCI insight (02.06.2016)
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Induced Pluripotent Stem Cell Model of Pulmonary Arterial Hypertension Reveals Novel Gene Expression and Patient Specificity
Sa, Silin, Gu, Mingxia, Chappell, James, Shao, Ning-Yi, Ameen, Mohamed, Elliott, Kathryn A T, Li, Dan, Grubert, Fabian, Li, Caiyun G, Taylor, Shalina, Cao, Aiqin, Ma, Yu, Fong, Ryan, Nguyen, Long, Wu, Joseph C, Snyder, Michael P, Rabinovitch, Marlene
Published in American journal of respiratory and critical care medicine (01.04.2017)
Published in American journal of respiratory and critical care medicine (01.04.2017)
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Comprehensive survey of human brain microRNA by deep sequencing
Shao, Ning-Yi, Hu, Hai Yang, Yan, Zheng, Xu, Ying, Hu, Hao, Menzel, Corinna, Li, Na, Chen, Wei, Khaitovich, Philipp
Published in BMC genomics (30.06.2010)
Published in BMC genomics (30.06.2010)
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A Comprehensive TALEN-Based Knockout Library for Generating Human-Induced Pluripotent Stem Cell–Based Models for Cardiovascular Diseases
Karakikes, Ioannis, Termglinchan, Vittavat, Cepeda, Diana A, Lee, Jaecheol, Diecke, Sebastian, Hendel, Ayal, Itzhaki, Ilanit, Ameen, Mohamed, Shrestha, Rajani, Wu, Haodi, Ma, Ning, Shao, Ning-Yi, Seeger, Timon, Woo, Nicole, Wilson, Kitchener D, Matsa, Elena, Porteus, Matthew H, Sebastiano, Vittorio, Wu, Joseph C
Published in Circulation research (12.05.2017)
Published in Circulation research (12.05.2017)
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Molecular and functional resemblance of differentiated cells derived from isogenic human iPSCs and SCNT-derived ESCs
Zhao, Ming-Tao, Chen, Haodong, Liu, Qing, Shao, Ning-Yi, Sayed, Nazish, Wo, Hung-Ta, Zhang, Joe Z., Ong, Sang-Ging, Liu, Chun, Kim, Youngkyun, Yang, Huaxiao, Chour, Tony, Ma, Hong, Gutierrez, Nuria Marti, Karakikes, Ioannis, Mitalipov, Shoukhrat, Snyder, Michael P., Wu, Joseph C.
Published in Proceedings of the National Academy of Sciences - PNAS (26.12.2017)
Published in Proceedings of the National Academy of Sciences - PNAS (26.12.2017)
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Cervical cancer immune infiltration microenvironment identification, construction of immune scores, assisting patient prognosis and immunotherapy
Yao, Shijie, Zhao, Liyang, Chen, Siming, Wang, Hua, Gao, Yang, Shao, Ning-Yi, Dai, Mengyuan, Cai, Hongbing
Published in Frontiers in immunology (10.03.2023)
Published in Frontiers in immunology (10.03.2023)
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Effects of Spaceflight on Human Induced Pluripotent Stem Cell-Derived Cardiomyocyte Structure and Function
Wnorowski, Alexa, Sharma, Arun, Chen, Haodong, Wu, Haodi, Shao, Ning-Yi, Sayed, Nazish, Liu, Chun, Countryman, Stefanie, Stodieck, Louis S., Rubins, Kathleen H., Wu, Sean M., Lee, Peter H.U., Wu, Joseph C.
Published in Stem cell reports (10.12.2019)
Published in Stem cell reports (10.12.2019)
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ACF chromatin-remodeling complex mediates stress-induced depressive-like behavior
Sun, HaoSheng, Damez-Werno, Diane M, Scobie, Kimberly N, Shao, Ning-Yi, Dias, Caroline, Rabkin, Jacqui, Koo, Ja Wook, Korb, Erica, Bagot, Rosemary C, Ahn, Francisca H, Cahill, Michael E, Labonté, Benoit, Mouzon, Ezekiell, Heller, Elizabeth A, Cates, Hannah, Golden, Sam A, Gleason, Kelly, Russo, Scott J, Andrews, Simon, Neve, Rachael, Kennedy, Pamela J, Maze, Ian, Dietz, David M, Allis, C David, Turecki, Gustavo, Varga-Weisz, Patrick, Tamminga, Carol, Shen, Li, Nestler, Eric J
Published in Nature medicine (01.10.2015)
Published in Nature medicine (01.10.2015)
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Genome-wide differential expression profiling of lncRNAs and mRNAs in human induced pluripotent stem cell-derived endothelial cells exposed to e-cigarette extract
Le, Hoai Huong Thi, Liu, Chen-Wei, Denaro, 3rd, Philip, Jousma, Jordan, Shao, Ning-Yi, Rahman, Irfan, Lee, Won Hee
Published in Stem cell research & therapy (04.12.2021)
Published in Stem cell research & therapy (04.12.2021)
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Journal Article
Cell Type-Specific Chromatin Signatures Underline Regulatory DNA Elements in Human Induced Pluripotent Stem Cells and Somatic Cells
Zhao, Ming-Tao, Shao, Ning-Yi, Hu, Shijun, Ma, Ning, Srinivasan, Rajini, Jahanbani, Fereshteh, Lee, Jaecheol, Zhang, Sophia L, Snyder, Michael P, Wu, Joseph C
Published in Circulation research (10.11.2017)
Published in Circulation research (10.11.2017)
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Calpain Inhibition Restores Autophagy and Prevents Mitochondrial Fragmentation in a Human iPSC Model of Diabetic Endotheliopathy
Ong, Sang-Bing, Lee, Won Hee, Shao, Ning-Yi, Ismail, Nur Izzah, Katwadi, Khairunnisa, Lim, Mim-Mim, Kwek, Xiu-Yi, Michel, Nathaly Anto, Li, Jiajun, Newson, Jordan, Tahmasebi, Soroush, Rehman, Jalees, Kodo, Kazuki, Jang, Hye Ryoun, Ong, Sang-Ging
Published in Stem cell reports (05.03.2019)
Published in Stem cell reports (05.03.2019)
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