Whole-brain calcium imaging with cellular resolution in freely behaving Caenorhabditis elegans
Nguyen, Jeffrey P., Shipley, Frederick B., Linder, Ashley N., Plummer, George S., Liu, Mochi, Setru, Sagar U., Shaevitz, Joshua W., Leifer, Andrew M.
Published in Proceedings of the National Academy of Sciences - PNAS (23.02.2016)
Published in Proceedings of the National Academy of Sciences - PNAS (23.02.2016)
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Journal Article
SLEAP: A deep learning system for multi-animal pose tracking
Pereira, Talmo D., Tabris, Nathaniel, Matsliah, Arie, Turner, David M., Li, Junyu, Ravindranath, Shruthi, Papadoyannis, Eleni S., Normand, Edna, Deutsch, David S., Wang, Z. Yan, McKenzie-Smith, Grace C., Mitelut, Catalin C., Castro, Marielisa Diez, D’Uva, John, Kislin, Mikhail, Sanes, Dan H., Kocher, Sarah D., Wang, Samuel S.-H., Falkner, Annegret L., Shaevitz, Joshua W., Murthy, Mala
Published in Nature methods (01.04.2022)
Published in Nature methods (01.04.2022)
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Journal Article
Passive Mechanical Forces Control Cell-Shape Change during Drosophila Ventral Furrow Formation
Polyakov, Oleg, He, Bing, Swan, Michael, Shaevitz, Joshua W., Kaschube, Matthias, Wieschaus, Eric
Published in Biophysical journal (19.08.2014)
Published in Biophysical journal (19.08.2014)
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Journal Article
Directional reversals enable Myxococcus xanthus cells to produce collective one-dimensional streams during fruiting-body formation
Thutupalli, Shashi, Sun, Mingzhai, Bunyak, Filiz, Palaniappan, Kannappan, Shaevitz, Joshua W.
Published in Journal of the Royal Society interface (06.08.2015)
Published in Journal of the Royal Society interface (06.08.2015)
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Journal Article
Competitive binding of independent extension and retraction motors explains the quantitative dynamics of type IV pili
Koch, Matthias D., Fei, Chenyi, Wingreen, Ned S., Shaevitz, Joshua W., Gitai, Zemer
Published in Proceedings of the National Academy of Sciences - PNAS (23.02.2021)
Published in Proceedings of the National Academy of Sciences - PNAS (23.02.2021)
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Journal Article
Rod-like bacterial shape is maintained by feedback between cell curvature and cytoskeletal localization
Ursell, Tristan S., Nguyen, Jeffrey, Monds, Russell D., Colavin, Alexandre, Billings, Gabriel, Ouzounov, Nikolay, Gitai, Zemer, Shaevitz, Joshua W., Huang, Kerwyn Casey
Published in Proceedings of the National Academy of Sciences - PNAS (18.03.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (18.03.2014)
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Journal Article
The bacterial actin MreB rotates, and rotation depends on cell-wall assembly
van Teeffelen, Sven, Wang, Siyuan, Furchtgott, Leon, Huang, Kerwyn Casey, Wingreen, Ned S., Shaevitz, Joshua W., Gitai, Zemer
Published in Proceedings of the National Academy of Sciences - PNAS (20.09.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (20.09.2011)
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Journal Article
Measuring the repertoire of age-related behavioral changes in Drosophila melanogaster
Overman, Katherine E, Choi, Daniel M, Leung, Kawai, Shaevitz, Joshua W, Berman, Gordon J
Published in PLoS computational biology (01.02.2022)
Published in PLoS computational biology (01.02.2022)
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Journal Article
MreB Orientation Correlates with Cell Diameter in Escherichia coli
Ouzounov, Nikolay, Nguyen, Jeffrey P., Bratton, Benjamin P., Jacobowitz, David, Gitai, Zemer, Shaevitz, Joshua W.
Published in Biophysical journal (06.09.2016)
Published in Biophysical journal (06.09.2016)
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Journal Article
Spatiotemporal organization of branched microtubule networks
Thawani, Akanksha, Stone, Howard A, Shaevitz, Joshua W, Petry, Sabine
Published in eLife (08.05.2019)
Published in eLife (08.05.2019)
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Journal Article
Automatically tracking neurons in a moving and deforming brain
Nguyen, Jeffrey P, Linder, Ashley N, Plummer, George S, Shaevitz, Joshua W, Leifer, Andrew M
Published in PLoS computational biology (01.05.2017)
Published in PLoS computational biology (01.05.2017)
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Journal Article
Multicolor multifocal 3D microscopy using in-situ optimization of a spatial light modulator
Amin, M. Junaid, Zhao, Tian, Yang, Haw, Shaevitz, Joshua W.
Published in Scientific reports (29.09.2022)
Published in Scientific reports (29.09.2022)
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Journal Article
Optogenetic dissection of descending behavioral control in Drosophila
Cande, Jessica, Namiki, Shigehiro, Qiu, Jirui, Korff, Wyatt, Card, Gwyneth M, Shaevitz, Joshua W, Stern, David L, Berman, Gordon J
Published in eLife (26.06.2018)
Published in eLife (26.06.2018)
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Journal Article