Loading…
Bulk tissue cell type deconvolution with multi-subject single-cell expression reference
Wang, Xuran, Park, Jihwan, Susztak, Katalin, Zhang, Nancy R., Li, Mingyao
Published in Nature communications (22.01.2019)
Published in Nature communications (22.01.2019)
Get full text
Journal Article
Loading…
survey of human brain transcriptome diversity at the single cell level
Darmanis, Spyros, Sloan, Steven A., Zhang, Ye, Enge, Martin, Caneda, Christine, Shuer, Lawrence M., Gephart, Melanie G. Hayden, Barres, Ben A., Quake, Stephen R.
Published in Proceedings of the National Academy of Sciences - PNAS (09.06.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (09.06.2015)
Get full text
Journal Article
Loading…
Single-Cell Analysis Reveals the Range of Transcriptional States of Circulating Human Neutrophils
Wigerblad, Gustaf, Cao, Qilin, Brooks, Stephen, Naz, Faiza, Gadkari, Manasi, Jiang, Kan, Gupta, Sarthak, O’Neil, Liam, Dell’Orso, Stefania, Kaplan, Mariana J., Franco, Luis M.
Published in The Journal of immunology (1950) (15.08.2022)
Published in The Journal of immunology (1950) (15.08.2022)
Get full text
Journal Article
Loading…
Miniaturization and optimization of 384-well compatible RNA sequencing library preparation
Mayday, Madeline Y., Khan, Lillian M., Chow, Eric D., Zinter, Matt S., DeRisi, Joseph L.
Published in PloS one (10.01.2019)
Published in PloS one (10.01.2019)
Get full text
Journal Article
Loading…
Single-Cell Transcriptomic Analysis of Human Lung Provides Insights into the Pathobiology of Pulmonary Fibrosis
Reyfman, Paul A., Walter, James M., Joshi, Nikita, Anekalla, Kishore R., McQuattie-Pimentel, Alexandra C., Chiu, Stephen, Fernandez, Ramiro, Akbarpour, Mahzad, Chen, Ching-I, Ren, Ziyou, Verma, Rohan, Abdala-Valencia, Hiam, Nam, Kiwon, Chi, Monica, Han, SeungHye, Gonzalez-Gonzalez, Francisco J., Soberanes, Saul, Watanabe, Satoshi, Williams, Kinola J. N., Flozak, Annette S., Nicholson, Trevor T., Morgan, Vince K., Winter, Deborah R., Hinchcliff, Monique, Hrusch, Cara L., Guzy, Robert D., Bonham, Catherine A., Sperling, Anne I., Bag, Remzi, Hamanaka, Robert B., Mutlu, Gökhan M., Yeldandi, Anjana V., Marshall, Stacy A., Shilatifard, Ali, Amaral, Luis A. N., Perlman, Harris, Sznajder, Jacob I., Argento, A. Christine, Gillespie, Colin T., Dematte, Jane, Jain, Manu, Singer, Benjamin D., Ridge, Karen M., Lam, Anna P., Bharat, Ankit, Bhorade, Sangeeta M., Gottardi, Cara J., Budinger, G. R. Scott, Misharin, Alexander V.
Published in American journal of respiratory and critical care medicine (15.06.2019)
Published in American journal of respiratory and critical care medicine (15.06.2019)
Get full text
Journal Article
Loading…
Single-cell transcriptome analysis of human skin identifies novel fibroblast subpopulation and enrichment of immune subsets in atopic dermatitis
He, Helen, Suryawanshi, Hemant, Morozov, Pavel, Gay-Mimbrera, Jesús, Del Duca, Ester, Kim, Hyun Je, Kameyama, Naoya, Estrada, Yeriel, Der, Evan, Krueger, James G., Ruano, Juan, Tuschl, Thomas, Guttman-Yassky, Emma
Published in Journal of allergy and clinical immunology (01.06.2020)
Published in Journal of allergy and clinical immunology (01.06.2020)
Get full text
Journal Article
Loading…
A Multiplexed Single-Cell CRISPR Screening Platform Enables Systematic Dissection of the Unfolded Protein Response
Adamson, Britt, Norman, Thomas M., Jost, Marco, Cho, Min Y., Nuñez, James K., Chen, Yuwen, Villalta, Jacqueline E., Gilbert, Luke A., Horlbeck, Max A., Hein, Marco Y., Pak, Ryan A., Gray, Andrew N., Gross, Carol A., Dixit, Atray, Parnas, Oren, Regev, Aviv, Weissman, Jonathan S.
Published in Cell (15.12.2016)
Published in Cell (15.12.2016)
Get full text
Journal Article
Loading…
The clinical utility and diagnostic implementation of human subject cell transdifferentiation followed by RNA sequencing
Li, Shenglan, Zhao, Sen, Sinson, Jefferson C., Bajic, Aleksandar, Rosenfeld, Jill A., Neeley, Matthew B., Pena, Mezthly, Worley, Kim C., Burrage, Lindsay C., Weisz-Hubshman, Monika, Ketkar, Shamika, Craigen, William J., Clark, Gary D., Lalani, Seema, Bacino, Carlos A., Machol, Keren, Chao, Hsiao-Tuan, Potocki, Lorraine, Emrick, Lisa, Sheppard, Jennifer, Nguyen, My T.T., Khoramnia, Anahita, Hernandez, Paula Patricia, Nagamani, Sandesh CS, Liu, Zhandong, Eng, Christine M., Lee, Brendan, Liu, Pengfei
Published in American journal of human genetics (02.05.2024)
Published in American journal of human genetics (02.05.2024)
Get full text
Journal Article
Loading…
Single-Cell Transcriptome Analysis Reveals Dynamic Cell Populations and Differential Gene Expression Patterns in Control and Aneurysmal Human Aortic Tissue
Li, Yanming, Ren, Pingping, Dawson, Ashley, Vasquez, Hernan G., Ageedi, Waleed, Zhang, Chen, Luo, Wei, Chen, Rui, Li, Yumei, Kim, Sangbae, Lu, Hong S., Cassis, Lisa A., Coselli, Joseph S., Daugherty, Alan, Shen, Ying H., LeMaire, Scott A.
Published in Circulation (06.10.2020)
Published in Circulation (06.10.2020)
Get full text
Journal Article
Loading…
Loading…
Single-cell RNA sequencing of mast cells in eosinophilic esophagitis reveals heterogeneity, local proliferation, and activation that persists in remission
Ben-Baruch Morgenstern, Netali, Ballaban, Adina Y., Wen, Ting, Shoda, Tetsuo, Caldwell, Julie M., Kliewer, Kara, Felton, Jennifer M., Abonia, J. Pablo, Mukkada, Vincent A., Putnam, Philip E., Bolton, Scott M., Dwyer, Daniel F., Barrett, Nora A., Rothenberg, Marc E.
Published in Journal of allergy and clinical immunology (01.06.2022)
Published in Journal of allergy and clinical immunology (01.06.2022)
Get full text
Journal Article
Loading…
Loading…
Single-cell eQTL mapping identifies cell type–specific genetic control of autoimmune disease
Yazar, Seyhan, Alquicira-Hernandez, Jose, Wing, Kristof, Senabouth, Anne, Gordon, M. Grace, Andersen, Stacey, Lu, Qinyi, Rowson, Antonia, Taylor, Thomas R. P., Clarke, Linda, Maccora, Katia, Chen, Christine, Cook, Anthony L., Ye, Chun Jimmie, Fairfax, Kirsten A., Hewitt, Alex W., Powell, Joseph E.
Published in Science (American Association for the Advancement of Science) (08.04.2022)
Published in Science (American Association for the Advancement of Science) (08.04.2022)
Get full text
Journal Article
Loading…
RNAcentral: a comprehensive database of non-coding RNA sequences
Petrov, Anton I, Kay, Simon J E, Kalvari, Ioanna, Howe, Kevin L, Gray, Kristian A, Bruford, Elspeth A, Kersey, Paul J, Cochrane, Guy, Finn, Robert D, Bateman, Alex, Kozomara, Ana, Griffiths-Jones, Sam, Frankish, Adam, Zwieb, Christian W, Lau, Britney Y, Williams, Kelly P, Chan, Patricia P, Lowe, Todd M, Cannone, Jamie J, Gutell, Robin, Machnicka, Magdalena A, Bujnicki, Janusz M, Yoshihama, Maki, Kenmochi, Naoya, Chai, Benli, Cole, James R, Szymanski, Maciej, Karlowski, Wojciech M, Wood, Valerie, Huala, Eva, Berardini, Tanya Z, Zhao, Yi, Chen, Runsheng, Zhu, Weimin, Paraskevopoulou, Maria D, Vlachos, Ioannis S, Hatzigeorgiou, Artemis G, Ma, Lina, Zhang, Zhang, Puetz, Joern, Stadler, Peter F, McDonald, Daniel, Basu, Siddhartha, Fey, Petra, Engel, Stacia R, Cherry, J Michael, Volders, Pieter-Jan, Mestdagh, Pieter, Wower, Jacek, Clark, Michael B, Quek, Xiu Cheng, Dinger, Marcel E
Published in Nucleic acids research (04.01.2017)
Published in Nucleic acids research (04.01.2017)
Get full text
Journal Article
Loading…
An immune-cell signature of bacterial sepsis
Reyes, Miguel, Filbin, Michael R., Bhattacharyya, Roby P., Billman, Kianna, Eisenhaure, Thomas, Hung, Deborah T., Levy, Bruce D., Baron, Rebecca M., Blainey, Paul C., Goldberg, Marcia B., Hacohen, Nir
Published in Nature medicine (01.03.2020)
Published in Nature medicine (01.03.2020)
Get full text
Journal Article
Loading…
Single-Cell RNA Sequencing Reveals Expanded Clones of Islet Antigen-Reactive CD4+ T Cells in Peripheral Blood of Subjects with Type 1 Diabetes
Cerosaletti, Karen, Barahmand-pour-Whitman, Fariba, Yang, Junbao, DeBerg, Hannah A, Dufort, Matthew J, Murray, Sara A, Israelsson, Elisabeth, Speake, Cate, Gersuk, Vivian H, Eddy, James A, Reijonen, Helena, Greenbaum, Carla J, Kwok, William W, Wambre, Erik, Prlic, Martin, Gottardo, Raphael, Nepom, Gerald T, Linsley, Peter S
Published in The Journal of immunology (1950) (01.07.2017)
Published in The Journal of immunology (1950) (01.07.2017)
Get full text
Journal Article
Loading…
Transcriptome-wide isoform-level dysregulation in ASD, schizophrenia, and bipolar disorder
Gandal, Michael J., Zhang, Pan, Hadjimichael, Evi, Walker, Rebecca L., Chen, Chao, Liu, Shuang, Won, Hyejung, van Bakel, Harm, Varghese, Merina, Wang, Yongjun, Shieh, Annie W., Haney, Jillian, Parhami, Sepideh, Belmont, Judson, Kim, Minsoo, Moran Losada, Patricia, Khan, Zenab, Mleczko, Justyna, Xia, Yan, Dai, Rujia, Wang, Daifeng, Yang, Yucheng T., Xu, Min, Fish, Kenneth, Hof, Patrick R., Warrell, Jonathan, Fitzgerald, Dominic, White, Kevin, Jaffe, Andrew E., Peters, Mette A., Gerstein, Mark, Liu, Chunyu, Iakoucheva, Lilia M., Pinto, Dalila, Geschwind, Daniel H., Ashley-Koch, Allison E., Crawford, Gregory E., Garrett, Melanie E., Song, Lingyun, Safi, Alexias, Johnson, Graham D., Wray, Gregory A., Reddy, Timothy E, Goes, Fernando S., Zandi, Peter, Bryois, Julien, Jaffe, Andrew E., Price, Amanda J., Ivanov, Nikolay A., Collado-Torres, Leonardo, Hyde, Thomas M., Burke, Emily E., Kleiman, Joel E., Tao, Ran, Shin, Joo Heon, Akbarian, Schahram, Girdhar, Kiran, Jiang, Yan, Kundakovic, Marija, Brown, Leanne, Kassim, Bibi S., Park, Royce B., Wiseman, Jennifer R, Zharovsky, Elizabeth, Jacobov, Rivka, Devillers, Olivia, Flatow, Elie, Hoffman, Gabriel E., Lipska, Barbara K., Lewis, David A., Haroutunian, Vahram, Hahn, Chang-Gyu, Charney, Alexander W., Dracheva, Stella, Kozlenkov, Alexey, Belmont, Judson, DelValle, Diane, Francoeur, Nancy, Hadjimichael, Evi, Pinto, Dalila, van Bakel, Harm, Roussos, Panos, Fullard, John F., Bendl, Jaroslav, Hauberg, Mads E., Mangravite, Lara M, Peters, Mette A., Chae, Yooree, Peng, Junmin, Niu, Mingming, Wang, Xusheng, Webster, Maree J., Beach, Thomas G., Chen, Chao, Jiang, Yi, Dai, Rujia, Shieh, Annie W., Liu, Chunyu, Grennan, Kay S., Xia, Yan
Published in Science (American Association for the Advancement of Science) (14.12.2018)
Published in Science (American Association for the Advancement of Science) (14.12.2018)
Get full text
Journal Article
Loading…
The Genetics of Chronic Itch: Gene Expression in the Skin of Patients with Atopic Dermatitis and Psoriasis with Severe Itch
Nattkemper, Leigh A., Tey, Hong Liang, Valdes-Rodriguez, Rodrigo, Lee, Helen, Mollanazar, Nicholas K., Albornoz, Christian, Sanders, Kristen M., Yosipovitch, Gil
Published in Journal of investigative dermatology (01.06.2018)
Published in Journal of investigative dermatology (01.06.2018)
Get full text
Journal Article
Loading…
Nucleotide resolution profiling of m3C RNA modification by HAC-seq
Cui, Jia, Liu, Qi, Sendinc, Erdem, Shi, Yang, Gregory, Richard I
Published in Nucleic acids research (18.03.2021)
Published in Nucleic acids research (18.03.2021)
Get full text
Journal Article
Loading…