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Microbial strain-level population structure and genetic diversity from metagenomes
Truong, Duy Tin, Tett, Adrian, Pasolli, Edoardo, Huttenhower, Curtis, Segata, Nicola
Published in Genome research (01.04.2017)
Published in Genome research (01.04.2017)
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Age-related changes in gut microbiota composition from newborn to centenarian: a cross-sectional study
Odamaki, Toshitaka, Kato, Kumiko, Sugahara, Hirosuke, Hashikura, Nanami, Takahashi, Sachiko, Xiao, Jin-zhong, Abe, Fumiaki, Osawa, Ro
Published in BMC microbiology (25.05.2016)
Published in BMC microbiology (25.05.2016)
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High-Throughput Mapping of B Cell Receptor Sequences to Antigen Specificity
Setliff, Ian, Shiakolas, Andrea R., Pilewski, Kelsey A., Murji, Amyn A., Mapengo, Rutendo E., Janowska, Katarzyna, Richardson, Simone, Oosthuysen, Charissa, Raju, Nagarajan, Ronsard, Larance, Kanekiyo, Masaru, Qin, Juliana S., Kramer, Kevin J., Greenplate, Allison R., McDonnell, Wyatt J., Graham, Barney S., Connors, Mark, Lingwood, Daniel, Acharya, Priyamvada, Morris, Lynn, Georgiev, Ivelin S.
Published in Cell (12.12.2019)
Published in Cell (12.12.2019)
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Temporal variability in quantitative human gut microbiome profiles and implications for clinical research
Vandeputte, Doris, De Commer, Lindsey, Tito, Raul Y., Kathagen, Gunter, Sabino, João, Vermeire, Séverine, Faust, Karoline, Raes, Jeroen
Published in Nature communications (18.11.2021)
Published in Nature communications (18.11.2021)
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Plasma DNA tissue mapping by genome-wide methylation sequencing for noninvasive prenatal, cancer, and transplantation assessments
Sun, Kun, Jiang, Peiyong, Chan, K. C. Allen, Wong, John, Cheng, Yvonne K. Y., Liang, Raymond H. S., Chan, Wai-kong, Ma, Edmond S. K., Chan, Stephen L., Cheng, Suk Hang, Chan, Rebecca W. Y., Tong, Yu K., Ng, Simon S. M., Wong, Raymond S. M., Hui, David S. C., Leung, Tse Ngong, Leung, Tak Y., Lai, Paul B. S., Chiu, Rossa W. K., Lo, Yuk Ming Dennis
Published in Proceedings of the National Academy of Sciences - PNAS (06.10.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (06.10.2015)
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A Model for Genome-First Care: Returning Secondary Genomic Findings to Participants and Their Healthcare Providers in a Large Research Cohort
Schwartz, Marci L.B., McCormick, Cara Zayac, Lazzeri, Amanda L., Lindbuchler, D’Andra M., Hallquist, Miranda L.G., Manickam, Kandamurugu, Buchanan, Adam H., Rahm, Alanna Kulchak, Giovanni, Monica A., Frisbie, Lauren, Flansburg, Carroll N., Davis, F. Daniel, Sturm, Amy C., Nicastro, Christine, Lebo, Matthew S., Mason-Suares, Heather, Mahanta, Lisa Marie, Carey, David J., Williams, Janet L., Williams, Marc S., Ledbetter, David H., Faucett, W. Andrew, Murray, Michael F.
Published in American journal of human genetics (06.09.2018)
Published in American journal of human genetics (06.09.2018)
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Truncations of Titin Causing Dilated Cardiomyopathy
Herman, Daniel S, Lam, Lien, Taylor, Matthew R.G, Wang, Libin, Teekakirikul, Polakit, Christodoulou, Danos, Conner, Lauren, DePalma, Steven R, McDonough, Barbara, Sparks, Elizabeth, Teodorescu, Debbie Lin, Cirino, Allison L, Banner, Nicholas R, Pennell, Dudley J, Graw, Sharon, Merlo, Marco, Di Lenarda, Andrea, Sinagra, Gianfranco, Bos, J. Martijn, Ackerman, Michael J, Mitchell, Richard N, Murry, Charles E, Lakdawala, Neal K, Ho, Carolyn Y, Barton, Paul J.R, Cook, Stuart A, Mestroni, Luisa, Seidman, Christine E, Seidman, J.G
Published in The New England journal of medicine (16.02.2012)
Published in The New England journal of medicine (16.02.2012)
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Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome
Goltsman, Daniela S. Aliaga, Sun, Christine L., Proctor, Diana M., DiGiulio, Daniel B., Robaczewska, Anna, Thomas, Brian C., Shaw, Gary M., Stevenson, David K., Holmes, Susan P., Banfield, Jillian F., Relman, David A.
Published in Genome research (01.10.2018)
Published in Genome research (01.10.2018)
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Systematic analysis of the gerontome reveals links between aging and age-related diseases
Fernandes, Maria, Wan, Cen, Tacutu, Robi, Barardo, Diogo, Rajput, Ashish, Wang, Jingwei, Thoppil, Harikrishnan, Thornton, Daniel, Yang, Chenhao, Freitas, Alex, de Magalhães, João Pedro
Published in Human molecular genetics (01.11.2016)
Published in Human molecular genetics (01.11.2016)
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Comparison of the gut microbiota composition between obese and non-obese individuals in a Japanese population, as analyzed by terminal restriction fragment length polymorphism and next-generation sequencing
Kasai, Chika, Sugimoto, Kazushi, Moritani, Isao, Tanaka, Junichiro, Oya, Yumi, Inoue, Hidekazu, Tameda, Masahiko, Shiraki, Katsuya, Ito, Masaaki, Takei, Yoshiyuki, Takase, Kojiro
Published in BMC gastroenterology (11.08.2015)
Published in BMC gastroenterology (11.08.2015)
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Detection of chromosomal alterations in the circulation of cancer patients with whole-genome sequencing
Leary, Rebecca J, Sausen, Mark, Kinde, Isaac, Papadopoulos, Nickolas, Carpten, John D, Craig, David, O'Shaughnessy, Joyce, Kinzler, Kenneth W, Parmigiani, Giovanni, Vogelstein, Bert, Diaz, Jr, Luis A, Velculescu, Victor E
Published in Science translational medicine (28.11.2012)
Published in Science translational medicine (28.11.2012)
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Nephele: a cloud platform for simplified, standardized and reproducible microbiome data analysis
Weber, Nick, Liou, David, Dommer, Jennifer, MacMenamin, Philip, Quiñones, Mariam, Misner, Ian, Oler, Andrew J, Wan, Joe, Kim, Lewis, Coakley McCarthy, Meghan, Ezeji, Samuel, Noble, Karlynn, Hurt, Darrell E
Published in Bioinformatics (15.04.2018)
Published in Bioinformatics (15.04.2018)
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Signatures of Archaic Adaptive Introgression in Present-Day Human Populations
Racimo, Fernando, Marnetto, Davide, Huerta-Sánchez, Emilia
Published in Molecular biology and evolution (01.02.2017)
Published in Molecular biology and evolution (01.02.2017)
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Full‐length transcriptome sequences and splice variants obtained by a combination of sequencing platforms applied to different root tissues of Salvia miltiorrhiza and tanshinone biosynthesis
Xu, Zhichao, Peters, Reuben J., Weirather, Jason, Luo, Hongmei, Liao, Baosheng, Zhang, Xin, Zhu, Yingjie, Ji, Aijia, Zhang, Bing, Hu, Songnian, Au, Kin Fai, Song, Jingyuan, Chen, Shilin
Published in The Plant journal : for cell and molecular biology (01.06.2015)
Published in The Plant journal : for cell and molecular biology (01.06.2015)
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Pyrosequencing study of fecal microflora of autistic and control children
Finegold, Sydney M., Dowd, Scot E., Gontcharova, Viktoria, Liu, Chengxu, Henley, Kathleen E., Wolcott, Randall D., Youn, Eunseog, Summanen, Paula H., Granpeesheh, Doreen, Dixon, Dennis, Liu, Minghsun, Molitoris, Denise R., Green, John A.
Published in Anaerobe (01.08.2010)
Published in Anaerobe (01.08.2010)
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Integrated biogeography of planktonic and sedimentary bacterial communities in the Yangtze River
Liu, Tang, Zhang, An Ni, Wang, Jiawen, Liu, Shufeng, Jiang, Xiaotao, Dang, Chenyuan, Ma, Tao, Liu, Sitong, Chen, Qian, Xie, Shuguang, Zhang, Tong, Ni, Jinren
Published in Microbiome (19.01.2018)
Published in Microbiome (19.01.2018)
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Graphene as a subnanometre trans-electrode membrane
Garaj, S., Hubbard, W., Reina, A., Kong, J., Branton, D., Golovchenko, J. A.
Published in Nature (London) (09.09.2010)
Published in Nature (London) (09.09.2010)
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