Nontargeted in vitro metabolomics for high-throughput identification of novel enzymes in Escherichia coli
Sévin, Daniel C, Fuhrer, Tobias, Zamboni, Nicola, Sauer, Uwe
Published in Nature methods (01.02.2017)
Published in Nature methods (01.02.2017)
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Journal Article
Genomewide landscape of gene–metabolome associations in Escherichia coli
Fuhrer, Tobias, Zampieri, Mattia, Sévin, Daniel C, Sauer, Uwe, Zamboni, Nicola
Published in Molecular systems biology (01.01.2017)
Published in Molecular systems biology (01.01.2017)
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Journal Article
Biological insights through nontargeted metabolomics
Sévin, Daniel C, Kuehne, Andreas, Zamboni, Nicola, Sauer, Uwe
Published in Current opinion in biotechnology (01.08.2015)
Published in Current opinion in biotechnology (01.08.2015)
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Journal Article
Bioaccumulation of therapeutic drugs by human gut bacteria
Klünemann, Martina, Andrejev, Sergej, Blasche, Sonja, Mateus, Andre, Phapale, Prasad, Devendran, Saravanan, Vappiani, Johanna, Simon, Bernd, Scott, Timothy A., Kafkia, Eleni, Konstantinidis, Dimitrios, Zirngibl, Katharina, Mastrorilli, Eleonora, Banzhaf, Manuel, Mackmull, Marie-Therese, Hövelmann, Felix, Nesme, Leo, Brochado, Ana Rita, Maier, Lisa, Bock, Thomas, Periwal, Vinita, Kumar, Manjeet, Kim, Yongkyu, Tramontano, Melanie, Schultz, Carsten, Beck, Martin, Hennig, Janosch, Zimmermann, Michael, Sévin, Daniel C., Cabreiro, Filipe, Savitski, Mikhail M., Bork, Peer, Typas, Athanasios, Patil, Kiran R.
Published in Nature (London) (23.09.2021)
Published in Nature (London) (23.09.2021)
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Journal Article
Metabolic memory underlying minimal residual disease in breast cancer
Radic Shechter, Ksenija, Kafkia, Eleni, Zirngibl, Katharina, Gawrzak, Sylwia, Alladin, Ashna, Machado, Daniel, Lüchtenborg, Christian, Sévin, Daniel C, Brügger, Britta, Patil, Kiran R, Jechlinger, Martin
Published in Molecular systems biology (01.10.2021)
Published in Molecular systems biology (01.10.2021)
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Journal Article
Integrating metabolome dynamics and process data to guide cell line selection in biopharmaceutical process development
Barberi, Gianmarco, Benedetti, Antonio, Diaz-Fernandez, Paloma, Sévin, Daniel C., Vappiani, Johanna, Finka, Gary, Bezzo, Fabrizio, Barolo, Massimiliano, Facco, Pierantonio
Published in Metabolic engineering (01.07.2022)
Published in Metabolic engineering (01.07.2022)
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Journal Article
The neurometabolic fingerprint of excessive alcohol drinking
Meinhardt, Marcus W, Sévin, Daniel C, Klee, Manuela L, Dieter, Sandra, Sauer, Uwe, Sommer, Wolfgang H
Published in Neuropsychopharmacology (New York, N.Y.) (13.03.2015)
Published in Neuropsychopharmacology (New York, N.Y.) (13.03.2015)
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Journal Article
Characterization of the small flavin-binding dodecin in the roseoflavin producer Streptomyces davawensis
Ludwig, Petra, Sévin, Daniel C, Busche, Tobias, Kalinowski, Jörn, Bourdeaux, Florian, Grininger, Martin, Mack, Matthias
Published in Microbiology (Society for General Microbiology) (01.06.2018)
Published in Microbiology (Society for General Microbiology) (01.06.2018)
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Journal Article
The bZIP transcription factors HY5 and HYH are positive regulators of the main nitrate reductase gene in Arabidopsis leaves, NIA2, but negative regulators of the nitrate uptake gene NRT1.1
Jonassen, Else M., Sévin, Daniel C., Lillo, Cathrine
Published in Journal of plant physiology (15.12.2009)
Published in Journal of plant physiology (15.12.2009)
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Journal Article
An unexpected link between fatty acid synthase and cholesterol synthesis in proinflammatory macrophage activation
Carroll, Richard G., Zasłona, Zbigniew, Galván-Peña, Silvia, Koppe, Emma L., Sévin, Daniel C., Angiari, Stefano, Triantafilou, Martha, Triantafilou, Kathy, Modis, Louise K., O’Neill, Luke A.
Published in The Journal of biological chemistry (13.04.2018)
Published in The Journal of biological chemistry (13.04.2018)
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Journal Article
Yeast Creates a Niche for Symbiotic Lactic Acid Bacteria through Nitrogen Overflow
Ponomarova, Olga, Gabrielli, Natalia, Sévin, Daniel C., Mülleder, Michael, Zirngibl, Katharina, Bulyha, Katsiaryna, Andrejev, Sergej, Kafkia, Eleni, Typas, Athanasios, Sauer, Uwe, Ralser, Markus, Patil, Kiran Raosaheb
Published in Cell systems (25.10.2017)
Published in Cell systems (25.10.2017)
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Journal Article
Life span extension by targeting a link between metabolism and histone acetylation in Drosophila
Peleg, Shahaf, Feller, Christian, Forne, Ignasi, Schiller, Evelyn, Sévin, Daniel C, Schauer, Tamas, Regnard, Catherine, Straub, Tobias, Prestel, Matthias, Klima, Caroline, Schmitt Nogueira, Melanie, Becker, Lore, Klopstock, Thomas, Sauer, Uwe, Becker, Peter B, Imhof, Axel, Ladurner, Andreas G
Published in EMBO reports (01.03.2016)
Published in EMBO reports (01.03.2016)
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Journal Article
Global Metabolic Responses to Salt Stress in Fifteen Species
Sévin, Daniel C, Stählin, Jacqueline N, Pollak, Georg R, Kuehne, Andreas, Sauer, Uwe
Published in PloS one (05.02.2016)
Published in PloS one (05.02.2016)
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Journal Article
A dual control mechanism synchronizes riboflavin and sulphur metabolism in Bacillus subtilis
Pedrolli, Danielle Biscaro, Kühm, Christian, Sévin, Daniel C., Vockenhuber, Michael P., Sauer, Uwe, Suess, Beatrix, Mack, Matthias
Published in Proceedings of the National Academy of Sciences - PNAS (10.11.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (10.11.2015)
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Journal Article
Integrated metabolic-transcriptomic network identifies immunometabolic modulations in human macrophages
Chen, Hung-Jen, Sévin, Daniel C., Griffith, Guillermo R., Vappiani, Johanna, Booty, Lee M., van Roomen, Cindy P.A.A., Kuiper, Johan, Dunnen, Jeroen den, de Jonge, Wouter J., Prinjha, Rab K., Mander, Palwinder K., Grandi, Paola, Wyspianska, Beata S., de Winther, Menno P.J.
Published in Cell reports (Cambridge) (24.09.2024)
Published in Cell reports (Cambridge) (24.09.2024)
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Journal Article
New insights into the mechanisms underlying 5-fluorouracil-induced intestinal toxicity based on transcriptomic and metabolomic responses in human intestinal organoids
Rodrigues, Daniela, de Souza, Terezinha, Coyle, Luke, Di Piazza, Matteo, Herpers, Bram, Ferreira, Sofia, Zhang, Mian, Vappiani, Johanna, Sévin, Daniel C., Gabor, Attila, Lynch, Anthony, Chung, Seung-Wook, Saez-Rodriguez, Julio, Jennen, Danyel G. J., Kleinjans, Jos C. S., de Kok, Theo M.
Published in Archives of toxicology (01.08.2021)
Published in Archives of toxicology (01.08.2021)
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Journal Article
Metabolic network segmentation: A probabilistic graphical modeling approach to identify the sites and sequential order of metabolic regulation from non-targeted metabolomics data
Kuehne, Andreas, Mayr, Urs, Sévin, Daniel C, Claassen, Manfred, Zamboni, Nicola
Published in PLoS computational biology (01.06.2017)
Published in PLoS computational biology (01.06.2017)
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Journal Article
Consistency across multi-omics layers in a drug-perturbed gut microbial community
Wuyts, Sander, Alves, Renato, Zimmermann-Kogadeeva, Maria, Nishijima, Suguru, Blasche, Sonja, Driessen, Marja, Geyer, Philipp E, Hercog, Rajna, Kartal, Ece, Maier, Lisa, Müller, Johannes B, Garcia Santamarina, Sarela, Schmidt, Thomas Sebastian B, Sevin, Daniel C, Telzerow, Anja, Treit, Peter V, Wenzel, Tobias, Typas, Athanasios, Patil, Kiran R, Mann, Matthias, Kuhn, Michael, Bork, Peer
Published in Molecular systems biology (12.09.2023)
Published in Molecular systems biology (12.09.2023)
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Journal Article