A bioinformatic assay for pluripotency in human cells
Müller, Franz-Josef, Schuldt, Bernhard M, Williams, Roy, Mason, Dylan, Altun, Gulsah, Papapetrou, Eirini P, Danner, Sandra, Goldmann, Johanna E, Herbst, Arne, Schmidt, Nils O, Aldenhoff, Josef B, Laurent, Louise C, Loring, Jeanne F
Published in Nature methods (01.04.2011)
Published in Nature methods (01.04.2011)
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Journal Article
Assessment of established techniques to determine developmental and malignant potential of human pluripotent stem cells
Allison, Thomas F., Andrews, Peter W., Avior, Yishai, Barbaric, Ivana, Benvenisty, Nissim, Bock, Christoph, Brehm, Jennifer, Brüstle, Oliver, Damjanov, Ivan, Elefanty, Andrew, Felkner, Daniel, Gokhale, Paul J., Halbritter, Florian, Healy, Lyn E., Hu, Tim X., Knowles, Barbara B., Loring, Jeanne F., Ludwig, Tenneille E., Mayberry, Robyn, Micallef, Suzanne, Mohamed, Jameelah S., Müller, Franz-Josef, Mummery, Christine L., Nakatsuji, Norio, Ng, Elizabeth S., Oh, Steve K. W., O’Shea, Orla, Pera, Martin F., Reubinoff, Benjamin, Robson, Paul, Rossant, Janet, Schuldt, Bernhard M., Solter, Davor, Sourris, Koula, Stacey, Glyn, Stanley, Edouard G., Suemori, Hirofumi, Takahashi, Kazutoshi, Yamanaka, Shinya
Published in Nature communications (15.05.2018)
Published in Nature communications (15.05.2018)
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Journal Article
iPSCORE: A Resource of 222 iPSC Lines Enabling Functional Characterization of Genetic Variation across a Variety of Cell Types
Panopoulos, Athanasia D., D'Antonio, Matteo, Benaglio, Paola, Williams, Roy, Hashem, Sherin I., Schuldt, Bernhard M., DeBoever, Christopher, Arias, Angelo D., Garcia, Melvin, Nelson, Bradley C., Harismendy, Olivier, Jakubosky, David A., Donovan, Margaret K.R., Greenwald, William W., Farnam, KathyJean, Cook, Megan, Borja, Victor, Miller, Carl A., Grinstein, Jonathan D., Drees, Frauke, Okubo, Jonathan, Diffenderfer, Kenneth E., Hishida, Yuriko, Modesto, Veronica, Dargitz, Carl T., Feiring, Rachel, Zhao, Chang, Aguirre, Aitor, McGarry, Thomas J., Matsui, Hiroko, Li, He, Reyna, Joaquin, Rao, Fangwen, O'Connor, Daniel T., Yeo, Gene W., Evans, Sylvia M., Chi, Neil C., Jepsen, Kristen, Nariai, Naoki, Müller, Franz-Josef, Goldstein, Lawrence S.B., Izpisua Belmonte, Juan Carlos, Adler, Eric, Loring, Jeanne F., Berggren, W. Travis, D'Antonio-Chronowska, Agnieszka, Smith, Erin N., Frazer, Kelly A.
Published in Stem cell reports (11.04.2017)
Published in Stem cell reports (11.04.2017)
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Journal Article
Power-laws and the use of pluripotent stem cell lines
Schuldt, Bernhard M, Guhr, Anke, Lenz, Michael, Kobold, Sabine, MacArthur, Ben D, Schuppert, Andreas, Löser, Peter, Müller, Franz-Josef
Published in PloS one (02.01.2013)
Published in PloS one (02.01.2013)
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Journal Article
Analysis of short tandem repeat expansions and their methylation state with nanopore sequencing
Giesselmann, Pay, Brändl, Björn, Raimondeau, Etienne, Bowen, Rebecca, Rohrandt, Christian, Tandon, Rashmi, Kretzmer, Helene, Assum, Günter, Galonska, Christina, Siebert, Reiner, Ammerpohl, Ole, Heron, Andrew, Schneider, Susanne A., Ladewig, Julia, Koch, Philipp, Schuldt, Bernhard M., Graham, James E., Meissner, Alexander, Müller, Franz-Josef
Published in Nature biotechnology (01.12.2019)
Published in Nature biotechnology (01.12.2019)
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Journal Article
Plant PhysioSpace: a robust tool to compare stress response across plant species
Hadizadeh Esfahani, Ali, Maß, Janina, Hallab, Asis, Schuldt, Bernhard M, Nevarez, David, Usadel, Björn, Ott, Mark-Christoph, Buer, Benjamin, Schuppert, Andreas
Published in Plant physiology (Bethesda) (03.11.2021)
Published in Plant physiology (Bethesda) (03.11.2021)
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Journal Article
Utilizing Regulatory Networks for Pluripotency Assessment in Stem Cells
Brändl, Björn, Schuldt, Bernhard M., Böhnke, Lena, Keminer, Oliver, Vaas, Lea A. I., Fischer, Rainer, Müller, Franz-Josef, Pless, Ole
Published in Current stem cell reports (01.09.2016)
Published in Current stem cell reports (01.09.2016)
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Journal Article
iPSCORE: A Resource of 222 iPSC Lines Enabling Functional Characterization of Genetic Variation across a Variety of Cell Types
Panopoulos, Athanasia D, D'Antonio, Matteo, Benaglio, Paola, Williams, Roy, Hashem, Sherin I, Schuldt, Bernhard M, DeBoever, Christopher, Arias, Angelo D, Garcia, Melvin, Nelson, Bradley C, Harismendy, Olivier, Jakubosky, David A, Donovan, Margaret K R, Greenwald, William W, Farnam, KathyJean, Cook, Megan, Borja, Victor, Miller, Carl A, Grinstein, Jonathan D, Drees, Frauke, Okubo, Jonathan, Diffenderfer, Kenneth E, Hishida, Yuriko, Modesto, Veronica, Dargitz, Carl T, Feiring, Rachel, Zhao, Chang, Aguirre, Aitor, McGarry, Thomas J, Matsui, Hiroko, Li, He, Reyna, Joaquin, Rao, Fangwen, O'Connor, Daniel T, Yeo, Gene W, Evans, Sylvia M, Chi, Neil C, Jepsen, Kristen, Nariai, Naoki, Müller, Franz-Josef, Goldstein, Lawrence S B, Izpisua Belmonte, Juan Carlos, Adler, Eric, Loring, Jeanne F, Berggren, W Travis, D'Antonio-Chronowska, Agnieszka, Smith, Erin N, Frazer, Kelly A
Published in Stem cell reports (11.04.2017)
Published in Stem cell reports (11.04.2017)
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Journal Article
METHODS OF IDENTIFYING DOPAMINERGIC NEURONS AND PROGENITOR CELLS
MÜLLER, Franz-Josef, BRATT-LEAL, Andres, LORING, Jeanne F, SCHULDT, Bernhard M, WILLIAMS, Roy
Year of Publication 11.08.2022
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Year of Publication 11.08.2022
Patent
METHODS OF IDENTIFYING DOPAMINERGIC NEURONS AND PROGENITOR CELLS
MÜLLER, Franz-Josef, BRATT-LEAL, Andres, LORING, Jeanne F, SCHULDT, Bernhard M, WILLIAMS, Roy
Year of Publication 10.08.2022
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Year of Publication 10.08.2022
Patent
Nanopore SimulatION - a raw data simulator for Nanopore Sequencing
Rohrandt, Christian, Kraft, Nadine, Gieselmann, Pay, Brandl, Bjorn, Schuldt, Bernhard M., Jetzek, Ulrich, Muller, Franz-Josef
Published in 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) (01.12.2018)
Published in 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) (01.12.2018)
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Conference Proceeding
Methods of identifying dopaminergic neurons and progenitor cells
MÜLLER, Franz-Josef, BRATT-LEAL, Andres, LORING, Jeanne F, SCHULDT, Bernhard M, WILLIAMS, Roy
Year of Publication 10.03.2022
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Year of Publication 10.03.2022
Patent
Methods of identifying dopaminergic neurons and progenitor cells
M?LLER Franz-Josef, SCHULDT Bernhard M, LORING Jeanne F, BRATT-LEAL Andres, WILLIAMS Roy
Year of Publication 01.03.2022
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Year of Publication 01.03.2022
Patent
METHODS OF IDENTIFYING DOPAMINERGIC NEURONS AND PROGENITOR CELLS
MÜLLER, Franz-Josef, LORING, Jeanne F, SCHULDT, Bernhard M, WILLIAMS, Roy
Year of Publication 28.01.2021
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Year of Publication 28.01.2021
Patent
METHODS OF IDENTIFYING DOPAMINERGIC NEURONS AND PROGENITOR CELLS
MULLER, FRANZ-JOSEF, SCHULDT, BERNHARD M, WILLIAMS, ROY, LORING, JEANNE F, BRATT-LEAL, ANDRES
Year of Publication 28.01.2021
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Year of Publication 28.01.2021
Patent
METHODS OF IDENTIFYING DOPAMINERGIC NEURONS AND PROGENITOR CELLS
MÜLLER Franz-josef, SCHULDT Bernhard M, LORING Jeanne F, BRATT-LEAL Andres, WILLIAMS Roy
Year of Publication 19.07.2022
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Year of Publication 19.07.2022
Patent
Métodos para identificação de neurônios dopaminérgicos e células progenitoras
BRATT-LEAL ANDRES, BERNHARD M. SCHULDT, MULLER FRANZ-JOSEF, JEANNE F. LORING, WILLIAMS ROY
Year of Publication 12.04.2022
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Year of Publication 12.04.2022
Patent
Repeat expansion and methylation state analysis with nanopore sequencing
Pay Gießelmann, Brändl, Björn, Raimondeau, Etienne, Bowen, Rebecca, Rohrandt, Christian, Tandon, Rashmi, Kretzmer, Helene, Assum, Günter, Galonska, Christina, Siebert, Reiner, Ammerpohl, Ole, Heron, Andrew, Schneider, Susanne A, Ladewig, Julia, Koch, Philipp, Schuldt, Bernhard M, Graham, James E, Meissner, Alexander, Mueller, Franz-Josef
Published in bioRxiv (28.11.2018)
Published in bioRxiv (28.11.2018)
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Paper