Human Disease Ontology 2018 update: classification, content and workflow expansion
Schriml, Lynn M, Mitraka, Elvira, Munro, James, Tauber, Becky, Schor, Mike, Nickle, Lance, Felix, Victor, Jeng, Linda, Bearer, Cynthia, Lichenstein, Richard, Bisordi, Katharine, Campion, Nicole, Hyman, Brooke, Kurland, David, Oates, Connor Patrick, Kibbey, Siobhan, Sreekumar, Poorna, Le, Chris, Giglio, Michelle, Greene, Carol
Published in Nucleic acids research (08.01.2019)
Published in Nucleic acids research (08.01.2019)
Get full text
Journal Article
Disease Ontology 2015 update: an expanded and updated database of human diseases for linking biomedical knowledge through disease data
Kibbe, Warren A, Arze, Cesar, Felix, Victor, Mitraka, Elvira, Bolton, Evan, Fu, Gang, Mungall, Christopher J, Binder, Janos X, Malone, James, Vasant, Drashtti, Parkinson, Helen, Schriml, Lynn M
Published in Nucleic acids research (28.01.2015)
Published in Nucleic acids research (28.01.2015)
Get full text
Journal Article
Modeling the enigma of complex disease etiology
Schriml, Lynn M, Lichenstein, Richard, Bisordi, Katharine, Bearer, Cynthia, Baron, J Allen, Greene, Carol
Published in Journal of translational medicine (25.02.2023)
Published in Journal of translational medicine (25.02.2023)
Get full text
Journal Article
The DO-KB Knowledgebase: a 20-year journey developing the disease open science ecosystem
Baron, J Allen, Johnson, Claudia Sanchez-Beato, Schor, Michael A, Olley, Dustin, Nickel, Lance, Felix, Victor, Munro, James B, Bello, Susan M, Bearer, Cynthia, Lichenstein, Richard, Bisordi, Katharine, Koka, Rima, Greene, Carol, Schriml, Lynn M
Published in Nucleic acids research (05.01.2024)
Published in Nucleic acids research (05.01.2024)
Get full text
Journal Article
Wikidata as a knowledge graph for the life sciences
Waagmeester, Andra, Stupp, Gregory, Burgstaller-Muehlbacher, Sebastian, Good, Benjamin M, Griffith, Malachi, Griffith, Obi L, Hanspers, Kristina, Hermjakob, Henning, Hudson, Toby S, Hybiske, Kevin, Keating, Sarah M, Manske, Magnus, Mayers, Michael, Mietchen, Daniel, Mitraka, Elvira, Pico, Alexander R, Putman, Timothy, Riutta, Anders, Queralt-Rosinach, Nuria, Schriml, Lynn M, Shafee, Thomas, Slenter, Denise, Stephan, Ralf, Thornton, Katherine, Tsueng, Ginger, Tu, Roger, Ul-Hasan, Sabah, Willighagen, Egon, Wu, Chunlei, Su, Andrew I
Published in eLife (17.03.2020)
Published in eLife (17.03.2020)
Get full text
Journal Article
ECO, the Evidence & Conclusion Ontology: community standard for evidence information
Giglio, Michelle, Tauber, Rebecca, Nadendla, Suvarna, Munro, James, Olley, Dustin, Ball, Shoshannah, Mitraka, Elvira, Schriml, Lynn M, Gaudet, Pascale, Hobbs, Elizabeth T, Erill, Ivan, Siegele, Deborah A, Hu, James C, Mungall, Chris, Chibucos, Marcus C
Published in Nucleic acids research (08.01.2019)
Published in Nucleic acids research (08.01.2019)
Get full text
Journal Article
Genomic reproducibility in the bioinformatics era
Baykal, Pelin Icer, Łabaj, Paweł Piotr, Markowetz, Florian, Schriml, Lynn M, Stekhoven, Daniel J, Mangul, Serghei, Beerenwinkel, Niko
Published in Genome Biology (09.08.2024)
Published in Genome Biology (09.08.2024)
Get full text
Journal Article
FoodOn: a harmonized food ontology to increase global food traceability, quality control and data integration
Dooley, Damion M., Griffiths, Emma J., Gosal, Gurinder S., Buttigieg, Pier L., Hoehndorf, Robert, Lange, Matthew C., Schriml, Lynn M., Brinkman, Fiona S. L., Hsiao, William W. L.
Published in NPJ science of food (18.12.2018)
Published in NPJ science of food (18.12.2018)
Get full text
Journal Article
COVID-19 pandemic reveals the peril of ignoring metadata standards
Schriml, Lynn M, Chuvochina, Maria, Davies, Neil, Eloe-Fadrosh, Emiley A, Finn, Robert D, Hugenholtz, Philip, Hunter, Christopher I, Hurwitz, Bonnie L, Kyrpides, Nikos C, Meyer, Folker, Mizrachi, Ilene Karsch, Sansone, Susanna-Assunta, Sutton, Granger, Tighe, Scott, Walls, Ramona
Published in Scientific data (19.06.2020)
Published in Scientific data (19.06.2020)
Get full text
Journal Article
The Human Disease Ontology 2022 update
Schriml, Lynn M, Munro, James B, Schor, Mike, Olley, Dustin, McCracken, Carrie, Felix, Victor, Baron, J Allen, Jackson, Rebecca, Bello, Susan M, Bearer, Cynthia, Lichenstein, Richard, Bisordi, Katharine, Dialo, Nicole Campion, Giglio, Michelle, Greene, Carol
Published in Nucleic acids research (07.01.2022)
Published in Nucleic acids research (07.01.2022)
Get full text
Journal Article
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies
Jackson, Rebecca, Matentzoglu, Nicolas, Overton, James A, Vita, Randi, Balhoff, James P, Buttigieg, Pier Luigi, Carbon, Seth, Courtot, Melanie, Diehl, Alexander D, Dooley, Damion M, Duncan, William D, Harris, Nomi L, Haendel, Melissa A, Lewis, Suzanna E, Natale, Darren A, Osumi-Sutherland, David, Ruttenberg, Alan, Schriml, Lynn M, Smith, Barry, Stoeckert, Jr, Christian J, Vasilevsky, Nicole A, Walls, Ramona L, Zheng, Jie, Mungall, Christopher J, Peters, Bjoern
Published in Database : the journal of biological databases and curation (26.10.2021)
Published in Database : the journal of biological databases and curation (26.10.2021)
Get full text
Journal Article
Assessing resource use: a case study with the Human Disease Ontology
Baron, J. Allen, Schriml, Lynn M
Published in Database : the journal of biological databases and curation (28.02.2023)
Published in Database : the journal of biological databases and curation (28.02.2023)
Get full text
Journal Article
Darwinian genomics and diversity in the tree of life
Stephan, Taylorlyn, Burgess, Shawn M, Cheng, Hans, Danko, Charles G, Gill, Clare A, Jarvis, Erich D, Koepfli, Klaus-Peter, Koltes, James E, Lyons, Eric, Ronald, Pamela, Ryder, Oliver A, Schriml, Lynn M, Soltis, Pamela, VandeWoude, Sue, Zhou, Huaijun, Ostrander, Elaine A, Karlsson, Elinor K
Published in Proceedings of the National Academy of Sciences - PNAS (25.01.2022)
Published in Proceedings of the National Academy of Sciences - PNAS (25.01.2022)
Get full text
Journal Article
COVID-19 biomarkers and their overlap with comorbidities in a disease biomarker data model
Gogate, Nikhita, Lyman, Daniel, Bell, Amanda, Cauley, Edmund, Crandall, Keith A, Joseph, Ashia, Kahsay, Robel, Natale, Darren A, Schriml, Lynn M, Sen, Sabyasach, Mazumder, Raja
Published in Briefings in bioinformatics (05.11.2021)
Published in Briefings in bioinformatics (05.11.2021)
Get full text
Journal Article
Habitat-Lite: a GSC case study based on free text terms for environmental metadata
Hirschman, Lynette, Clark, Cheryl, Cohen, K Bretonnel, Mardis, Scott, Luciano, Joanne, Kottmann, Renzo, Cole, James, Markowitz, Victor, Kyrpides, Nikos, Morrison, Norman, Schriml, Lynn M, Field, Dawn
Published in Omics (Larchmont, N.Y.) (01.06.2008)
Published in Omics (Larchmont, N.Y.) (01.06.2008)
Get more information
Journal Article
Metagenomic Methods for Addressing NASA's Planetary Protection Policy Requirements on Future Missions: A Workshop Report
Green, Stefan J, Torok, Tamas, Allen, Jonathan E, Eloe-Fadrosh, Emiley, Jackson, Scott A, Jiang, Sunny C, Levine, Stuart S, Levy, Shawn, Schriml, Lynn M, Thomas, W Kelley, Wood, Jason M, Tighe, Scott W
Published in Astrobiology (01.08.2023)
Published in Astrobiology (01.08.2023)
Get more information
Journal Article
The Genomic Standards Consortium
Field, Dawn, Amaral-Zettler, Linda, Cochrane, Guy, Cole, James R, Dawyndt, Peter, Garrity, George M, Gilbert, Jack, Glöckner, Frank Oliver, Hirschman, Lynette, Karsch-Mizrachi, Ilene, Klenk, Hans-Peter, Knight, Rob, Kottmann, Renzo, Kyrpides, Nikos, Meyer, Folker, San Gil, Inigo, Sansone, Susanna-Assunta, Schriml, Lynn M, Sterk, Peter, Tatusova, Tatiana, Ussery, David W, White, Owen, Wooley, John
Published in PLoS biology (01.06.2011)
Published in PLoS biology (01.06.2011)
Get full text
Journal Article