MISA-web: a web server for microsatellite prediction
Beier, Sebastian, Thiel, Thomas, Münch, Thomas, Scholz, Uwe, Mascher, Martin
Published in Bioinformatics (Oxford, England) (15.08.2017)
Published in Bioinformatics (Oxford, England) (15.08.2017)
Get full text
Journal Article
Genebank genomics bridges the gap between the conservation of crop diversity and plant breeding
Mascher, Martin, Schreiber, Mona, Scholz, Uwe, Graner, Andreas, Reif, Jochen C., Stein, Nils
Published in Nature genetics (01.07.2019)
Published in Nature genetics (01.07.2019)
Get full text
Journal Article
The barley pan-genome reveals the hidden legacy of mutation breeding
Jayakodi, Murukarthick, Padmarasu, Sudharsan, Haberer, Georg, Bonthala, Venkata Suresh, Gundlach, Heidrun, Monat, Cécile, Lux, Thomas, Kamal, Nadia, Lang, Daniel, Himmelbach, Axel, Ens, Jennifer, Zhang, Xiao-Qi, Angessa, Tefera T., Zhou, Gaofeng, Tan, Cong, Hill, Camilla, Wang, Penghao, Schreiber, Miriam, Boston, Lori B., Plott, Christopher, Jenkins, Jerry, Guo, Yu, Fiebig, Anne, Budak, Hikmet, Xu, Dongdong, Zhang, Jing, Wang, Chunchao, Grimwood, Jane, Schmutz, Jeremy, Guo, Ganggang, Zhang, Guoping, Mochida, Keiichi, Hirayama, Takashi, Sato, Kazuhiro, Chalmers, Kenneth J., Langridge, Peter, Waugh, Robbie, Pozniak, Curtis J., Scholz, Uwe, Mayer, Klaus F. X., Spannagl, Manuel, Li, Chengdao, Mascher, Martin, Stein, Nils
Published in Nature (London) (10.12.2020)
Published in Nature (London) (10.12.2020)
Get full text
Journal Article
A chromosome conformation capture ordered sequence of the barley genome
Mascher, Martin, Gundlach, Heidrun, Himmelbach, Axel, Beier, Sebastian, Twardziok, Sven O., Wicker, Thomas, Radchuk, Volodymyr, Dockter, Christoph, Hedley, Pete E., Russell, Joanne, Bayer, Micha, Ramsay, Luke, Liu, Hui, Haberer, Georg, Zhang, Xiao-Qi, Zhang, Qisen, Barrero, Roberto A., Li, Lin, Taudien, Stefan, Groth, Marco, Felder, Marius, Hastie, Alex, Šimková, Hana, Staňková, Helena, Vrána, Jan, Chan, Saki, Muñoz-Amatriaín, María, Ounit, Rachid, Wanamaker, Steve, Bolser, Daniel, Colmsee, Christian, Schmutzer, Thomas, Aliyeva-Schnorr, Lala, Grasso, Stefano, Tanskanen, Jaakko, Chailyan, Anna, Sampath, Dharanya, Heavens, Darren, Clissold, Leah, Cao, Sujie, Chapman, Brett, Dai, Fei, Han, Yong, Li, Hua, Li, Xuan, Lin, Chongyun, McCooke, John K., Tan, Cong, Wang, Penghao, Wang, Songbo, Yin, Shuya, Zhou, Gaofeng, Poland, Jesse A., Bellgard, Matthew I., Borisjuk, Ljudmilla, Houben, Andreas, Doležel, Jaroslav, Ayling, Sarah, Lonardi, Stefano, Kersey, Paul, Langridge, Peter, Muehlbauer, Gary J., Clark, Matthew D., Caccamo, Mario, Schulman, Alan H., Mayer, Klaus F. X., Platzer, Matthias, Close, Timothy J., Scholz, Uwe, Hansson, Mats, Zhang, Guoping, Braumann, Ilka, Spannagl, Manuel, Li, Chengdao, Waugh, Robbie, Stein, Nils
Published in Nature (London) (26.04.2017)
Published in Nature (London) (26.04.2017)
Get full text
Journal Article
Long-read sequence assembly: a technical evaluation in barley
Mascher, Martin, Wicker, Thomas, Jenkins, Jerry, Plott, Christopher, Lux, Thomas, Koh, Chu Shin, Ens, Jennifer, Gundlach, Heidrun, Boston, Lori B, Tulpová, Zuzana, Holden, Samuel, Hernández-Pinzón, Inmaculada, Scholz, Uwe, Mayer, Klaus F X, Spannagl, Manuel, Pozniak, Curtis J, Sharpe, Andrew G, Šimková, Hana, Moscou, Matthew J, Grimwood, Jane, Schmutz, Jeremy, Stein, Nils
Published in The Plant cell (19.07.2021)
Published in The Plant cell (19.07.2021)
Get full text
Journal Article
TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools
Monat, Cécile, Padmarasu, Sudharsan, Lux, Thomas, Wicker, Thomas, Gundlach, Heidrun, Himmelbach, Axel, Ens, Jennifer, Li, Chengdao, Muehlbauer, Gary J, Schulman, Alan H, Waugh, Robbie, Braumann, Ilka, Pozniak, Curtis, Scholz, Uwe, Mayer, Klaus F X, Spannagl, Manuel, Stein, Nils, Mascher, Martin
Published in Genome Biology (18.12.2019)
Published in Genome Biology (18.12.2019)
Get full text
Journal Article
Genebank genomics highlights the diversity of a global barley collection
Milner, Sara G., Jost, Matthias, Taketa, Shin, Mazón, Elena Rey, Himmelbach, Axel, Oppermann, Markus, Weise, Stephan, Knüpffer, Helmut, Basterrechea, Martín, König, Patrick, Schüler, Danuta, Sharma, Rajiv, Pasam, Raj K., Rutten, Twan, Guo, Ganggang, Xu, Dongdong, Zhang, Jing, Herren, Gerhard, Müller, Thomas, Krattinger, Simon G., Keller, Beat, Jiang, Yong, González, Maria Y., Zhao, Yusheng, Habekuß, Antje, Färber, Sandra, Ordon, Frank, Lange, Matthias, Börner, Andreas, Graner, Andreas, Reif, Jochen C., Scholz, Uwe, Mascher, Martin, Stein, Nils
Published in Nature genetics (01.02.2019)
Published in Nature genetics (01.02.2019)
Get full text
Journal Article
Unlocking the Barley Genome by Chromosomal and Comparative Genomics
Mayer, Klaus F.X., Martis, Mihaela, Hedley, Pete E., Šimková, Hana, Liu, Hui, Morris, Jenny A., Steuernagel, Burkhard, Taudien, Stefan, Roessner, Stephan, Gundlach, Heidrun, Kubaláková, Marie, Suchánková, Pavla, Murat, Florent, Felder, Marius, Nussbaumer, Thomas, Graner, Andreas, Salse, Jerome, Endo, Takashi, Sakai, Hiroaki, Tanaka, Tsuyoshi, ltoh, Takeshi, Sato, Kazuhiro, Platzer, Matthias, Matsumoto, Takashi, Scholz, Uwe, Doležel, Jaroslav, Waugh, Robbie, Stein, Nils
Published in The Plant cell (01.04.2011)
Published in The Plant cell (01.04.2011)
Get full text
Journal Article
Supernumerary B chromosomes of Aegilops speltoides undergo precise elimination in roots early in embryo development
Ruban, Alevtina, Schmutzer, Thomas, Wu, Dan D., Fuchs, Joerg, Boudichevskaia, Anastassia, Rubtsova, Myroslava, Pistrick, Klaus, Melzer, Michael, Himmelbach, Axel, Schubert, Veit, Scholz, Uwe, Houben, Andreas
Published in Nature communications (02.06.2020)
Published in Nature communications (02.06.2020)
Get full text
Journal Article
Chromosome-scale genome assembly for the duckweed Spirodela intermedia, integrating cytogenetic maps, PacBio and Oxford Nanopore libraries
Hoang, Phuong T. N., Fiebig, Anne, Novák, Petr, Macas, Jiří, Cao, Hieu X., Stepanenko, Anton, Chen, Guimin, Borisjuk, Nikolai, Scholz, Uwe, Schubert, Ingo
Published in Scientific reports (05.11.2020)
Published in Scientific reports (05.11.2020)
Get full text
Journal Article
Towards a whole‐genome sequence for rye (Secale cereale L.)
Bauer, Eva, Schmutzer, Thomas, Barilar, Ivan, Mascher, Martin, Gundlach, Heidrun, Martis, Mihaela M., Twardziok, Sven O., Hackauf, Bernd, Gordillo, Andres, Wilde, Peer, Schmidt, Malthe, Korzun, Viktor, Mayer, Klaus F.X., Schmid, Karl, Schön, Chris‐Carolin, Scholz, Uwe
Published in The Plant journal : for cell and molecular biology (01.03.2017)
Published in The Plant journal : for cell and molecular biology (01.03.2017)
Get full text
Journal Article
e!DAL--a framework to store, share and publish research data
Arend, Daniel, Lange, Matthias, Chen, Jinbo, Colmsee, Christian, Flemming, Steffen, Hecht, Denny, Scholz, Uwe
Published in BMC bioinformatics (24.06.2014)
Published in BMC bioinformatics (24.06.2014)
Get full text
Journal Article
A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome
Chapman, Jarrod A, Mascher, Martin, Buluç, Aydın, Barry, Kerrie, Georganas, Evangelos, Session, Adam, Strnadova, Veronika, Jenkins, Jerry, Sehgal, Sunish, Oliker, Leonid, Schmutz, Jeremy, Yelick, Katherine A, Scholz, Uwe, Waugh, Robbie, Poland, Jesse A, Muehlbauer, Gary J, Stein, Nils, Rokhsar, Daniel S
Published in Genome Biology (31.01.2015)
Published in Genome Biology (31.01.2015)
Get full text
Journal Article
BARLEX- the Barley Draft Genome Explorer
Colmsee, Christian, Beier, Sebastian, Himmelbach, Axel, Schmutzer, Thomas, Stein, Nils, Scholz, Uwe, Mascher, Martin
Published in Molecular plant (01.06.2015)
Published in Molecular plant (01.06.2015)
Get full text
Journal Article
Phosphate systemically inhibits development of arbuscular mycorrhiza in Petunia hybrida and represses genes involved in mycorrhizal functioning
Breuillin, Florence, Schramm, Jonathan, Hajirezaei, Mohammad, Ahkami, Amir, Favre, Patrick, Druege, Uwe, Hause, Bettina, Bucher, Marcel, Kretzschmar, Tobias, Bossolini, Eligio, Kuhlemeier, Cris, Martinoia, Enrico, Franken, Philipp, Scholz, Uwe, Reinhardt, Didier
Published in The Plant journal : for cell and molecular biology (01.12.2010)
Published in The Plant journal : for cell and molecular biology (01.12.2010)
Get full text
Journal Article
Mapping-by-sequencing accelerates forward genetics in barley
Mascher, Martin, Jost, Matthias, Kuon, Joel-Elias, Himmelbach, Axel, Aßfalg, Axel, Beier, Sebastian, Scholz, Uwe, Graner, Andreas, Stein, Nils
Published in Genome biology (10.06.2014)
Published in Genome biology (10.06.2014)
Get full text
Journal Article
BrAPI—an application programming interface for plant breeding applications
Selby, Peter, Abbeloos, Rafael, Backlund, Jan Erik, Basterrechea Salido, Martin, Bauchet, Guillaume, Benites-Alfaro, Omar E, Birkett, Clay, Calaminos, Viana C, Carceller, Pierre, Cornut, Guillaume, Vasques Costa, Bruno, Edwards, Jeremy D, Finkers, Richard, Yanxin Gao, Star, Ghaffar, Mehmood, Glaser, Philip, Guignon, Valentin, Hok, Puthick, Kilian, Andrzej, König, Patrick, Lagare, Jack Elendil B, Lange, Matthias, Laporte, Marie-Angélique, Larmande, Pierre, LeBauer, David S, Lyon, David A, Marshall, David S, Matthews, Dave, Milne, Iain, Mistry, Naymesh, Morales, Nicolas, Mueller, Lukas A, Neveu, Pascal, Papoutsoglou, Evangelia, Pearce, Brian, Perez-Masias, Ivan, Pommier, Cyril, Ramírez-González, Ricardo H, Rathore, Abhishek, Raquel, Angel Manica, Raubach, Sebastian, Rife, Trevor, Robbins, Kelly, Rouard, Mathieu, Sarma, Chaitanya, Scholz, Uwe, Sempéré, Guilhem, Shaw, Paul D, Simon, Reinhard, Soldevilla, Nahuel, Stephen, Gordon, Sun, Qi, Tovar, Clarysabel, Uszynski, Grzegorz, Verouden, Maikel
Published in Bioinformatics (15.10.2019)
Published in Bioinformatics (15.10.2019)
Get full text
Journal Article
Genomics-informed prebreeding unlocks the diversity in genebanks for wheat improvement
Schulthess, Albert W., Kale, Sandip M., Liu, Fang, Zhao, Yusheng, Philipp, Norman, Rembe, Maximilian, Jiang, Yong, Beukert, Ulrike, Serfling, Albrecht, Himmelbach, Axel, Fuchs, Jörg, Oppermann, Markus, Weise, Stephan, Boeven, Philipp H. G., Schacht, Johannes, Longin, C. Friedrich H., Kollers, Sonja, Pfeiffer, Nina, Korzun, Viktor, Lange, Matthias, Scholz, Uwe, Stein, Nils, Mascher, Martin, Reif, Jochen C.
Published in Nature genetics (01.10.2022)
Published in Nature genetics (01.10.2022)
Get full text
Journal Article