Whole Blood Transcriptomics Identifies Differences in Innate Immune Pathway Expression in Infants at Risk for Peanut Allergy
Lang, Abigail, Gadd, Samantha, Gunderman, Lauren, Lippner, Elizabeth, Devonshire, Ashley, Schipma, Matthew J, Berdnikovs, Sergejs, Kumar, Rajesh
Published in Clinical and experimental allergy (16.10.2024)
Published in Clinical and experimental allergy (16.10.2024)
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Journal Article
Nuclear Condensation during Mouse Erythropoiesis Requires Caspase-3-Mediated Nuclear Opening
Zhao, Baobing, Mei, Yang, Schipma, Matthew J., Roth, Eric Wayne, Bleher, Reiner, Rappoport, Joshua Z., Wickrema, Amittha, Yang, Jing, Ji, Peng
Published in Developmental cell (07.03.2016)
Published in Developmental cell (07.03.2016)
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Journal Article
The Cyclic AMP Receptor Protein Regulates Quorum Sensing and Global Gene Expression in Yersinia pestis during Planktonic Growth and Growth in Biofilms
Ritzert, Jeremy T, Minasov, George, Embry, Ryan, Schipma, Matthew J, Satchell, Karla J F
Published in mBio (19.11.2019)
Published in mBio (19.11.2019)
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Journal Article
Checkpoint kinase 1/2 inhibition potentiates anti-tumoral immune response and sensitizes gliomas to immune checkpoint blockade
Dmello, Crismita, Zhao, Junfei, Chen, Li, Gould, Andrew, Castro, Brandyn, Arrieta, Victor A., Zhang, Daniel Y., Kim, Kwang-Soo, Kanojia, Deepak, Zhang, Peng, Miska, Jason, Yeeravalli, Ragini, Habashy, Karl, Saganty, Ruth, Kang, Seong Jae, Fares, Jawad, Liu, Connor, Dunn, Gavin, Bartom, Elizabeth, Schipma, Matthew J., Hsu, Patrick D., Alghamri, Mahmoud S., Lesniak, Maciej S., Heimberger, Amy B., Rabadan, Raul, Lee-Chang, Catalina, Sonabend, Adam M.
Published in Nature communications (22.03.2023)
Published in Nature communications (22.03.2023)
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Journal Article
Lactate-dependent transcriptional regulation controls mammalian eye morphogenesis
Takata, Nozomu, Miska, Jason M., Morgan, Marc A., Patel, Priyam, Billingham, Leah K., Joshi, Neha, Schipma, Matthew J., Dumar, Zachary J., Joshi, Nikita R., Misharin, Alexander V., Embry, Ryan B., Fiore, Luciano, Gao, Peng, Diebold, Lauren P., McElroy, Gregory S., Shilatifard, Ali, Chandel, Navdeep S., Oliver, Guillermo
Published in Nature communications (14.07.2023)
Published in Nature communications (14.07.2023)
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Journal Article
The Oncogenic Kaposi’s Sarcoma-Associated Herpesvirus Encodes a Mimic of the Tumor-Suppressive miR-15/16 miRNA Family
Morrison, Kylee, Manzano, Mark, Chung, Kevin, Schipma, Matthew J., Bartom, Elizabeth T., Gottwein, Eva
Published in Cell reports (Cambridge) (03.12.2019)
Published in Cell reports (Cambridge) (03.12.2019)
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Journal Article
Divergent target recognition by coexpressed 5'-isomiRs of miR-142-3p and selective viral mimicry
Manzano, Mark, Forte, Eleonora, Raja, Archana N, Schipma, Matthew J, Gottwein, Eva
Published in RNA (Cambridge) (01.09.2015)
Published in RNA (Cambridge) (01.09.2015)
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Journal Article
Hepatocyte X-box binding protein 1 deficiency increases liver injury in mice fed a high-fat/sugar diet
Liu, Xiaoying, Henkel, Anne S, LeCuyer, Brian E, Schipma, Matthew J, Anderson, Kristy A, Green, Richard M
Published in American journal of physiology: Gastrointestinal and liver physiology (15.12.2015)
Published in American journal of physiology: Gastrointestinal and liver physiology (15.12.2015)
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Journal Article
Cardiomyocyte-Specific Ablation of Med1 Subunit of the Mediator Complex Causes Lethal Dilated Cardiomyopathy in Mice
Jia, Yuzhi, Chang, Hsiang-Chun, Schipma, Matthew J, Liu, Jing, Shete, Varsha, Liu, Ning, Sato, Tatsuya, Thorp, Edward B, Barger, Philip M, Zhu, Yi-Jun, Viswakarma, Navin, Kanwar, Yashpal S, Ardehali, Hossein, Thimmapaya, Bayar, Reddy, Janardan K
Published in PloS one (22.08.2016)
Published in PloS one (22.08.2016)
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Journal Article
Machine learning-assisted elucidation of CD81-CD44 interactions in promoting cancer stemness and extracellular vesicle integrity
Ramos, Erika K, Tsai, Chia-Feng, Jia, Yuzhi, Cao, Yue, Manu, Megan, Taftaf, Rokana, Hoffmann, Andrew D, El-Shennawy, Lamiaa, Gritsenko, Marina A, Adorno-Cruz, Valery, Schuster, Emma J, Scholten, David, Patel, Dhwani, Liu, Xia, Patel, Priyam, Wray, Brian, Zhang, Youbin, Zhang, Shanshan, Moore, Ronald J, Mathews, Jeremy V, Schipma, Matthew J, Liu, Tao, Tokars, Valerie L, Cristofanilli, Massimo, Shi, Tujin, Shen, Yang, Dashzeveg, Nurmaa K, Liu, Huiping
Published in eLife (04.10.2022)
Published in eLife (04.10.2022)
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Journal Article
Aberrant overexpression of CD14 on granulocytes sensitizes the innate immune response in mDia1 heterozygous del(5q) MDS
Keerthivasan, Ganesan, Mei, Yang, Zhao, Baobing, Zhang, Ling, Harris, Chad E., Gao, Juehua, Basiorka, Ashley A., Schipma, Matthew J., McElherne, James, Yang, Jing, Verma, Amit K., Pellagatti, Andrea, Boultwood, Jacqueline, List, Alan F., Williams, David A., Ji, Peng
Published in Blood (31.07.2014)
Published in Blood (31.07.2014)
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Journal Article
Critical Role for the Human Cytomegalovirus Major Immediate Early Proteins in Recruitment of RNA Polymerase II and H3K27Ac To an Enhancer-Like Element in OriLyt
Forte, Eleonora, Li, Ming, Ayaloglu Butun, Fatma, Hu, Qiaolin, Borst, Eva Maria, Schipma, Matthew J., Piunti, Andrea, Shilatifard, Ali, Terhune, Scott S., Abecassis, Michael, Meier, Jeffery L., Hummel, Mary
Published in Microbiology spectrum (14.02.2023)
Published in Microbiology spectrum (14.02.2023)
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Journal Article
Chemical inhibition of oxygen-sensing prolyl hydroxylases impairs angiogenic competence of human vascular endothelium through metabolic reprogramming
Tiwari, Ratnakar, Bommi, Prashant V., Gao, Peng, Schipma, Matthew J., Zhou, Yalu, Quaggin, Susan E., Chandel, Navdeep S., Kapitsinou, Pinelopi P.
Published in iScience (21.10.2022)
Published in iScience (21.10.2022)
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Journal Article
Transcriptional Analysis of Liver Tissue Identifies Distinct Phenotypes of Indeterminate Pediatric Acute Liver Failure
Chapin, Catherine A, Taylor, Sarah A, Malladi, Padmini, Neighbors, Katie, Melin‐Aldana, Hector, Kreiger, Portia A, Bowsher, Nina, Schipma, Matthew J, Loomes, Kathleen M, Behrens, Edward M, Alonso, Estella M
Published in Hepatology communications (01.08.2021)
Published in Hepatology communications (01.08.2021)
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Journal Article
CD95/Fas protects triple negative breast cancer from anti-tumor activity of NK cells
Qadir, Abdul S., Guégan, Jean Philippe, Ginestier, Christophe, Chaibi, Assia, Bessede, Alban, Charafe-Jauffret, Emmanuelle, Macario, Manon, Lavoué, Vincent, Rouge, Thibault de la Motte, Law, Calvin, Vilker, Jacob, Wang, Hongbin, Stroup, Emily, Schipma, Matthew J., Bridgeman, Bryan, Murmann, Andrea E., Ji, Zhe, Legembre, Patrick, Peter, Marcus E.
Published in iScience (19.11.2021)
Published in iScience (19.11.2021)
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Journal Article
6mer Seed Toxicity in Viral microRNAs
Murmann, Andrea E., Bartom, Elizabeth T., Schipma, Matthew J., Vilker, Jacob, Chen, Siquan, Peter, Marcus E.
Published in iScience (21.02.2020)
Published in iScience (21.02.2020)
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Journal Article
Correction: Cardiomyocyte-Specific Ablation of Med1 Subunit of the Mediator Complex Causes Lethal Dilated Cardiomyopathy in Mice
Jia, Yuzhi, Chang, Hsiang-Chun, Schipma, Matthew J, Liu, Jing, Shete, Varsha, Liu, Ning, Sato, Tatsuya, Thorp, Edward B, Barger, Philip M, Zhu, Yi-Jun, Viswakarma, Navin, Kanwar, Yashpal S, Ardehali, Hossein, Thimmapaya, Bayar, Reddy, Janardan K
Published in PloS one (30.09.2016)
Published in PloS one (30.09.2016)
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