Application of Enhanced Sampling Monte Carlo Methods for High-Resolution Protein-Protein Docking in Rosetta
Zhang, Zhe, Schindler, Christina E M, Lange, Oliver F, Zacharias, Martin
Published in PloS one (08.06.2015)
Published in PloS one (08.06.2015)
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Large-Scale Assessment of Binding Free Energy Calculations in Active Drug Discovery Projects
Schindler, Christina E. M, Baumann, Hannah, Blum, Andreas, Böse, Dietrich, Buchstaller, Hans-Peter, Burgdorf, Lars, Cappel, Daniel, Chekler, Eugene, Czodrowski, Paul, Dorsch, Dieter, Eguida, Merveille K. I, Follows, Bruce, Fuchß, Thomas, Grädler, Ulrich, Gunera, Jakub, Johnson, Theresa, Jorand Lebrun, Catherine, Karra, Srinivasa, Klein, Markus, Knehans, Tim, Koetzner, Lisa, Krier, Mireille, Leiendecker, Matthias, Leuthner, Birgitta, Li, Liwei, Mochalkin, Igor, Musil, Djordje, Neagu, Constantin, Rippmann, Friedrich, Schiemann, Kai, Schulz, Robert, Steinbrecher, Thomas, Tanzer, Eva-Maria, Unzue Lopez, Andrea, Viacava Follis, Ariele, Wegener, Ansgar, Kuhn, Daniel
Published in Journal of chemical information and modeling (23.11.2020)
Published in Journal of chemical information and modeling (23.11.2020)
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Journal Article
The pepATTRACT web server for blind, large-scale peptide-protein docking
de Vries, Sjoerd J, Rey, Julien, Schindler, Christina E M, Zacharias, Martin, Tuffery, Pierre
Published in Nucleic acids research (03.07.2017)
Published in Nucleic acids research (03.07.2017)
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Journal Article
A Web Interface for Easy Flexible Protein-Protein Docking with ATTRACT
de Vries, Sjoerd J., Schindler, Christina E.M., Chauvot de Beauchêne, Isaure, Zacharias, Martin
Published in Biophysical journal (03.02.2015)
Published in Biophysical journal (03.02.2015)
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Fully Blind Peptide-Protein Docking with pepATTRACT
Schindler, Christina E.M., de Vries, Sjoerd J., Zacharias, Martin
Published in Structure (London) (04.08.2015)
Published in Structure (London) (04.08.2015)
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Journal Article
SAXS Data Alone can Generate High-Quality Models of Protein-Protein Complexes
Schindler, Christina E.M., de Vries, Sjoerd J., Sasse, Alexander, Zacharias, Martin
Published in Structure (London) (02.08.2016)
Published in Structure (London) (02.08.2016)
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Free energy calculations elucidate substrate binding, gating mechanism, and tolerance‐promoting mutations in herbicide target 4‐hydroxyphenylpyruvate dioxygenase
Schindler, Christina E. M., Hollenbach, Eva, Mietzner, Thomas, Schleifer, Klaus‐Jürgen, Zacharias, Martin
Published in Protein science (01.06.2019)
Published in Protein science (01.06.2019)
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Collaborative Assessment of Molecular Geometries and Energies from the Open Force Field
D’Amore, Lorenzo, Hahn, David F., Dotson, David L., Horton, Joshua T., Anwar, Jamshed, Craig, Ian, Fox, Thomas, Gobbi, Alberto, Lakkaraju, Sirish Kaushik, Lucas, Xavier, Meier, Katharina, Mobley, David L., Narayanan, Arjun, Schindler, Christina E. M., Swope, William C., in ’t Veld, Pieter J., Wagner, Jeffrey, Xue, Bai, Tresadern, Gary
Published in Journal of chemical information and modeling (12.12.2022)
Published in Journal of chemical information and modeling (12.12.2022)
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Discovery of Cycloalkyl[c]thiophenes as Novel Scaffolds for Hypoxia-Inducible Factor-2α Inhibitors
Buchstaller, Hans-Peter, Sala-Hojman, Ada, Leiendecker, Matthias, Albers, Joachim, Anlauf, Uwe, Berges, Nina, Dong, Liming, Fuchß, Thomas, Germann, Martina, Knehans, Tim, Krier, Mireille, Lecomte, Marc, Müller, Daniel, Müller, Sandra R., Leuthner, Birgitta, Lindemann, Ralph, Musil, Djordje, Nowak, Mateusz, Reither, Vivian, Rettig, Corinna, Schindler, Christina E. M., Pakulska, Urszula, Spuck, Dieter, Wegener, Ansgar, Zarębski, Adrian
Published in Journal of medicinal chemistry (13.07.2023)
Published in Journal of medicinal chemistry (13.07.2023)
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Structural Architecture of the Nucleosome Remodeler ISWI Determined from Cross-Linking, Mass Spectrometry, SAXS, and Modeling
Harrer, Nadine, Schindler, Christina E.M., Bruetzel, Linda K., Forné, Ignasi, Ludwigsen, Johanna, Imhof, Axel, Zacharias, Martin, Lipfert, Jan, Mueller-Planitz, Felix
Published in Structure (London) (06.02.2018)
Published in Structure (London) (06.02.2018)
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Best practices for constructing, preparing, and evaluating protein-ligand binding affinity benchmarks
Hahn, David F, Bayly, Christopher I, Macdonald, Hannah E Bruce, Chodera, John D, Gapsys, Vytautas, Antonia S J S Mey, Mobley, David L, Laura Perez Benito, Schindler, Christina E M, Tresadern, Gary, Warren, Gregory L
Published in arXiv.org (12.11.2021)
Published in arXiv.org (12.11.2021)
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