Parasitic helminths induce fetal-like reversion in the intestinal stem cell niche
Nusse, Ysbrand M., Savage, Adam K., Marangoni, Pauline, Rosendahl-Huber, Axel K. M., Landman, Tyler A., de Sauvage, Frederic J., Locksley, Richard M., Klein, Ophir D.
Published in Nature (London) (01.07.2018)
Published in Nature (London) (01.07.2018)
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Journal Article
Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq
Swanson, Elliott, Lord, Cara, Reading, Julian, Heubeck, Alexander T, Genge, Palak C, Thomson, Zachary, Weiss, Morgan DA, Li, Xiao-Jun, Savage, Adam K, Green, Richard R, Torgerson, Troy R, Bumol, Thomas F, Graybuck, Lucas T, Skene, Peter J
Published in eLife (09.04.2021)
Published in eLife (09.04.2021)
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Journal Article
Interleukin-33 in Tissue Homeostasis, Injury, and Inflammation
Molofsky, Ari B., Savage, Adam K., Locksley, Richard M.
Published in Immunity (Cambridge, Mass.) (16.06.2015)
Published in Immunity (Cambridge, Mass.) (16.06.2015)
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Journal Article
The Transcription Factor PLZF Directs the Effector Program of the NKT Cell Lineage
Savage, Adam K., Constantinides, Michael G., Han, Jin, Picard, Damien, Martin, Emmanuel, Li, Bofeng, Lantz, Olivier, Bendelac, Albert
Published in Immunity (Cambridge, Mass.) (19.09.2008)
Published in Immunity (Cambridge, Mass.) (19.09.2008)
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Journal Article
TCR-inducible PLZF transcription factor required for innate phenotype of a subset of γδ T cells with restricted TCR diversity
Kreslavsky, Taras, Savage, Adam K, Hobbs, Robin, Gounari, Fotini, Bronson, Roderick, Pereira, Pablo, Pandolfi, Pier Paolo, Bendelac, Albert, von Boehmer, Harald
Published in Proceedings of the National Academy of Sciences - PNAS (28.07.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (28.07.2009)
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Journal Article
A comprehensive platform for analyzing longitudinal multi-omics data
Vasaikar, Suhas V., Savage, Adam K., Gong, Qiuyu, Swanson, Elliott, Talla, Aarthi, Lord, Cara, Heubeck, Alexander T., Reading, Julian, Graybuck, Lucas T., Meijer, Paul, Torgerson, Troy R., Skene, Peter J., Bumol, Thomas F., Li, Xiao-jun
Published in Nature communications (27.03.2023)
Published in Nature communications (27.03.2023)
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Journal Article
PLZF induces an intravascular surveillance program mediated by long-lived LFA-1-ICAM-1 interactions
Thomas, Seddon Y, Scanlon, Seth T, Griewank, Klaus G, Constantinides, Michael G, Savage, Adam K, Barr, Kenneth A, Meng, Fanyong, Luster, Andrew D, Bendelac, Albert
Published in The Journal of experimental medicine (06.06.2011)
Published in The Journal of experimental medicine (06.06.2011)
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Journal Article
A stromal progenitor and ILC2 niche promotes muscle eosinophilia and fibrosis-associated gene expression
Kastenschmidt, Jenna M., Coulis, Gerald, Farahat, Philip K., Pham, Phillip, Rios, Rodolfo, Cristal, Therese T., Mannaa, Ali H., Ayer, Rachel E., Yahia, Rayan, Deshpande, Archis A., Hughes, Brandon S., Savage, Adam K., Giesige, Carlee R., Harper, Scott Q., Locksley, Richard M., Mozaffar, Tahseen, Villalta, S. Armando
Published in Cell reports (Cambridge) (13.04.2021)
Published in Cell reports (Cambridge) (13.04.2021)
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Journal Article
Abatacept increases T cell exhaustion in early RA individuals who carry HLA risk alleles
Long, Sarah Alice, Muir, Virginia S, Jones, Britta E, Wall, Valerie Z, Ylescupidez, Alyssa, Hocking, Anne M, Pribitzer, Stephan, Thorpe, Jerill, Fuchs, Bryce, Wiedeman, Alice E, Tatum, Megan, Lambert, Katharina, Uchtenhagen, Hannes, Speake, Cate, Ng, Bernard, Heubeck, Alexander T, Torgerson, Troy R, Savage, Adam K, Maldonado, Michael A, Ray, Neelanjana, Khaychuk, Vadim, Liu, Jinqi, Linsley, Peter S, Buckner, Jane H
Published in Frontiers in immunology (08.04.2024)
Published in Frontiers in immunology (08.04.2024)
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Journal Article
Multimodal analysis for human ex vivo studies shows extensive molecular changes from delays in blood processing
Savage, Adam K., Gutschow, Miriam V., Chiang, Tony, Henderson, Kathy, Green, Richard, Chaudhari, Monica, Swanson, Elliott, Heubeck, Alexander T., Kondza, Nina, Burley, Kelli C., Genge, Palak C., Lord, Cara, Smith, Tanja, Thomson, Zachary, Beaubien, Aldan, Johnson, Ed, Goldy, Jeff, Bolouri, Hamid, Buckner, Jane H., Meijer, Paul, Coffey, Ernest M., Skene, Peter J., Torgerson, Troy R., Li, Xiao-jun, Bumol, Thomas F.
Published in iScience (21.05.2021)
Published in iScience (21.05.2021)
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Journal Article
TCR-inducible PLZF transcription factor required for innate phenotype of a subset of gamma delta T cells with restricted TCR diversity
Kreslavsky, Taras, Savage, Adam K, Hobbs, Robin, Gounari, Fotini, Bronson, Roderick, Pereira, Pablo, Pandolfi, Pier Paolo, Bendelac, Albert, Von Boehmer, Harald
Published in Proceedings of the National Academy of Sciences - PNAS (28.07.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (28.07.2009)
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Journal Article
Trimodal single-cell profiling reveals a novel pediatric CD8αα+ T cell subset and broad age-related molecular reprogramming across the T cell compartment
Thomson, Zachary, He, Ziyuan, Swanson, Elliott, Henderson, Katherine, Phalen, Cole, Zaim, Samir Rachid, Pebworth, Mark-Phillip, Okada, Lauren Y., Heubeck, Alexander T., Roll, Charles R., Hernandez, Veronica, Weiss, Morgan, Genge, Palak C., Reading, Julian, Giles, Josephine R., Manne, Sasikanth, Dougherty, Jeanette, Jasen, C. J., Greenplate, Allison R., Becker, Lynne A., Graybuck, Lucas T., Vasaikar, Suhas V., Szeto, Gregory L., Savage, Adam K., Speake, Cate, Buckner, Jane H., Li, Xiao-jun, Bumol, Thomas F., Wherry, E.John, Torgerson, Troy R., Vella, Laura A., Henrickson, Sarah E., Skene, Peter J., Gustafson, Claire E.
Published in Nature immunology (01.11.2023)
Published in Nature immunology (01.11.2023)
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Journal Article
Author Correction: Trimodal single-cell profiling reveals a novel pediatric CD8αα+ T cell subset and broad age-related molecular reprogramming across the T cell compartment
Thomson, Zachary, He, Ziyuan, Swanson, Elliott, Henderson, Katherine, Phalen, Cole, Zaim, Samir Rachid, Pebworth, Mark-Phillip, Okada, Lauren Y., Heubeck, Alexander T., Roll, Charles R., Hernandez, Veronica, Weiss, Morgan, Genge, Palak C., Reading, Julian, Giles, Josephine R., Manne, Sasikanth, Dougherty, Jeanette, Jasen, C. J., Greenplate, Allison R., Becker, Lynne A., Graybuck, Lucas T., Vasaikar, Suhas V., Szeto, Gregory L., Savage, Adam K., Speake, Cate, Buckner, Jane H., Li, Xiao-jun, Bumol, Thomas F., Wherry, E.John, Torgerson, Troy R., Vella, Laura A., Henrickson, Sarah E., Skene, Peter J., Gustafson, Claire E.
Published in Nature immunology (01.03.2024)
Published in Nature immunology (01.03.2024)
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Journal Article
A simple strategy for sample annotation error detection in cytometry datasets
Smithmyer, Megan E., Wiedeman, Alice E., Skibinski, David A. G., Savage, Adam K., Acosta‐Vega, Carolina, Scheiding, Sheila, Gersuk, Vivian H., O'Rourke, Colin, Long, S. Alice, Buckner, Jane H., Speake, Cate
Published in Cytometry. Part A (01.04.2022)
Published in Cytometry. Part A (01.04.2022)
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Journal Article
Publisher Correction: Parasitic helminths induce fetal-like reversion in the intestinal stem cell niche
Nusse, Ysbrand M., Savage, Adam K., Marangoni, Pauline, Rosendahl-Huber, Axel K. M., Landman, Tyler A., de Sauvage, Frederic J., Locksley, Richard M., Klein, Ophir D.
Published in Nature (London) (01.10.2018)
Published in Nature (London) (01.10.2018)
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Journal Article
Dual epithelial and immune cell function of Dvl1 regulates gut microbiota composition and intestinal homeostasis
Belinson, Haim, Savage, Adam K, Fadrosh, Douglas, Kuo, Yien-Ming, Lin, Din, Valladares, Ricardo, Nusse, Ysbrand, Wynshaw-Boris, Anthony, Lynch, Susan V, Locksley, Richard M, Klein, Ophir D
Published in JCI insight (07.07.2016)
Published in JCI insight (07.07.2016)
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Journal Article
TCR-inducible PLZF transcription factor required for innate phenotype of a subset of gammadelta T cells with restricted TCR diversity
Kreslavsky, Taras, Savage, Adam K, Hobbs, Robin, Gounari, Fotini, Bronson, Roderick, Pereira, Pablo, Pandolfi, Pier Paolo, Bendelac, Albert, von Boehmer, Harald
Published in Proceedings of the National Academy of Sciences - PNAS (28.07.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (28.07.2009)
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Journal Article