An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape
Pokusaeva, Victoria O, Usmanova, Dinara R, Putintseva, Ekaterina V, Espinar, Lorena, Sarkisyan, Karen S, Mishin, Alexander S, Bogatyreva, Natalya S, Ivankov, Dmitry N, Akopyan, Arseniy V, Avvakumov, Sergey Ya, Povolotskaya, Inna S, Filion, Guillaume J, Carey, Lucas B, Kondrashov, Fyodor A
Published in PLoS genetics (10.04.2019)
Published in PLoS genetics (10.04.2019)
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Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics
Akerboom, Jasper, Carreras Calderón, Nicole, Tian, Lin, Wabnig, Sebastian, Prigge, Matthias, Tolö, Johan, Gordus, Andrew, Orger, Michael B, Severi, Kristen E, Macklin, John J, Patel, Ronak, Pulver, Stefan R, Wardill, Trevor J, Fischer, Elisabeth, Schüler, Christina, Chen, Tsai-Wen, Sarkisyan, Karen S, Marvin, Jonathan S, Bargmann, Cornelia I, Kim, Douglas S, Kügler, Sebastian, Lagnado, Leon, Hegemann, Peter, Gottschalk, Alexander, Schreiter, Eric R, Looger, Loren L
Published in Frontiers in molecular neuroscience (01.01.2013)
Published in Frontiers in molecular neuroscience (01.01.2013)
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KillerOrange, a Genetically Encoded Photosensitizer Activated by Blue and Green Light
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Published in PloS one (17.12.2015)
Published in PloS one (17.12.2015)
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Systematic Comparison of Plant Promoters in Nicotiana spp. Expression Systems
Shakhova, Ekaterina S, Markina, Nadezhda M, Mitiouchkina, Tatiana, Bugaeva, Evgenia N, Karataeva, Tatiana A, Palkina, Kseniia A, Fakhranurova, Liliia I, Yampolsky, Ilia V, Sarkisyan, Karen S, Mishin, Alexander S
Published in International journal of molecular sciences (06.12.2022)
Published in International journal of molecular sciences (06.12.2022)
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Triple Reporter Assay: A Non-Overlapping Luciferase Assay for the Measurement of Complex Macromolecular Regulation in Cancer Cells Using a New Mushroom Luciferase-Luciferin Pair
Mujawar, Aaiyas, Phadte, Pratham, Palkina, Ksenia A, Markina, Nadezhda M, Mohammad, Ameena, Thakur, Bhushan L, Sarkisyan, Karen S, Balakireva, Anastasia V, Ray, Pritha, Yamplosky, Ilia, De, Abhijit
Published in Sensors (Basel, Switzerland) (22.08.2023)
Published in Sensors (Basel, Switzerland) (22.08.2023)
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Domain Truncation in Hispidin Synthase Orthologs from Non-Bioluminescent Fungi Does Not Lead to Hispidin Biosynthesis
Palkina, Kseniia A, Balakireva, Anastasia V, Belozerova, Olga A, Chepurnykh, Tatiana V, Markina, Nadezhda M, Kovalchuk, Sergey I, Tsarkova, Aleksandra S, Mishin, Alexander S, Yampolsky, Ilia V, Sarkisyan, Karen S
Published in International journal of molecular sciences (10.01.2023)
Published in International journal of molecular sciences (10.01.2023)
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Heterogeneity of the GFP fitness landscape and data-driven protein design
Gonzalez Somermeyer, Louisa, Fleiss, Aubin, Mishin, Alexander S, Bozhanova, Nina G, Igolkina, Anna A, Meiler, Jens, Alaball Pujol, Maria-Elisenda, Putintseva, Ekaterina V, Sarkisyan, Karen S, Kondrashov, Fyodor A
Published in eLife (05.05.2022)
Published in eLife (05.05.2022)
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Green Fluorescent Protein with Anionic Tryptophan-Based Chromophore and Long Fluorescence Lifetime
Sarkisyan, Karen S., Goryashchenko, Alexander S., Lidsky, Peter V., Gorbachev, Dmitry A., Bozhanova, Nina G., Gorokhovatsky, Andrey Yu, Pereverzeva, Alina R., Ryumina, Alina P., Zherdeva, Victoria V., Savitsky, Alexander P., Solntsev, Kyril M., Bommarius, Andreas S., Sharonov, George V., Lindquist, Jake R., Drobizhev, Mikhail, Hughes, Thomas E., Rebane, Aleksander, Lukyanov, Konstantin A., Mishin, Alexander S.
Published in Biophysical journal (21.07.2015)
Published in Biophysical journal (21.07.2015)
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Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore
Pletneva, Nadya V, Pletnev, Vladimir Z, Sarkisyan, Karen S, Gorbachev, Dmitry A, Egorov, Evgeny S, Mishin, Alexander S, Lukyanov, Konstantin A, Dauter, Zbigniew, Pletnev, Sergei
Published in PloS one (23.12.2015)
Published in PloS one (23.12.2015)
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Novel BRET combination for detection of rapamycin-induced protein dimerization using luciferase from fungus Neonothopanus nambi
Mujawar, Aaiyas, Dimri, Shalini, Palkina, Ksenia A, Markina, Nadezhda M, Sarkisyan, Karen S, Balakireva, Anastasia V, Yampolsky, Ilia V, De, Abhijit
Published in Heliyon (29.02.2024)
Published in Heliyon (29.02.2024)
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Local fitness landscape of the green fluorescent protein
Sarkisyan, Karen S, Bolotin, Dmitry A, Meer, Margarita V, Usmanova, Dinara R, Mishin, Alexander S, Sharonov, George V, Ivankov, Dmitry N, Bozhanova, Nina G, Baranov, Mikhail S, Soylemez, Onuralp, Bogatyreva, Natalya S, Vlasov, Peter K, Egorov, Evgeny S, Logacheva, Maria D, Kondrashov, Alexey S, Chudakov, Dmitry M, Putintseva, Ekaterina V, Mamedov, Ilgar Z, Tawfik, Dan S, Lukyanov, Konstantin A, Kondrashov, Fyodor A
Published in Nature (London) (19.05.2016)
Published in Nature (London) (19.05.2016)
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Measuring Caenorhabditis elegans Spatial Foraging and Food Intake Using Bioluminescent Bacteria
Ding, Siyu Serena, Romenskyy, Maksym, Sarkisyan, Karen S, Brown, Andre E X
Published in Genetics (Austin) (01.03.2020)
Published in Genetics (Austin) (01.03.2020)
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Protein labeling for live cell fluorescence microscopy with a highly photostable renewable signal
Bozhanova, Nina G, Baranov, Mikhail S, Klementieva, Natalia V, Sarkisyan, Karen S, Gavrikov, Alexey S, Yampolsky, Ilia V, Zagaynova, Elena V, Lukyanov, Sergey A, Lukyanov, Konstantin A, Mishin, Alexander S
Published in Chemical science (Cambridge) (01.10.2017)
Published in Chemical science (Cambridge) (01.10.2017)
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FUCCI-Red: a single-color cell cycle indicator for fluorescence lifetime imaging
Shirmanova, Marina V., Gorbachev, Dmitry A., Sarkisyan, Karen S., Parnes, Alina P., Gavrina, Alena I., Polozova, Anastasia V., Kovaleva, Tatyana F., Snopova, Ludmila B., Dudenkova, Varvara V., Zagaynova, Elena V., Lukyanov, Konstantin A.
Published in Cellular and molecular life sciences : CMLS (01.04.2021)
Published in Cellular and molecular life sciences : CMLS (01.04.2021)
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An improved pathway for autonomous bioluminescence imaging in eukaryotes
Shakhova, Ekaterina S, Karataeva, Tatiana A, Markina, Nadezhda M, Mitiouchkina, Tatiana, Palkina, Kseniia A, Perfilov, Maxim M, Wood, Monika G, Hoang, Trish T, Hall, Mary P, Fakhranurova, Liliia I, Alekberova, Anna E, Malyshevskaia, Alena K, Gorbachev, Dmitry A, Bugaeva, Evgenia N, Pletneva, Ludmila K, Babenko, Vladislav V, Boldyreva, Daria I, Gorokhovatsky, Andrey Y, Balakireva, Anastasia V, Gao, Feng, Choob, Vladimir V, Encell, Lance P, Wood, Keith V, Yampolsky, Ilia V, Sarkisyan, Karen S, Mishin, Alexander S
Published in Nature methods (01.03.2024)
Published in Nature methods (01.03.2024)
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Novel BRET combination for detection of rapamycin-induced protein dimerization using luciferase from fungus Neonothopanusnambi
Mujawar, Aaiyas, Dimri, Shalini, Palkina, Ksenia A., Markina, Nadezhda M., Sarkisyan, Karen S., Balakireva, Anastasia V., Yampolsky, Ilia V., De, Abhijit
Published in Heliyon (29.02.2024)
Published in Heliyon (29.02.2024)
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