EukRef: Phylogenetic curation of ribosomal RNA to enhance understanding of eukaryotic diversity and distribution
Del Campo, Javier, Kolisko, Martin, Boscaro, Vittorio, Santoferrara, Luciana F, Nenarokov, Serafim, Massana, Ramon, Guillou, Laure, Simpson, Alastair, Berney, Cedric, de Vargas, Colomban, Brown, Matthew W, Keeling, Patrick J, Wegener Parfrey, Laura
Published in PLoS biology (17.09.2018)
Published in PLoS biology (17.09.2018)
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Journal Article
Three redescriptions in Tintinnopsis (Protista: Ciliophora: Tintinnina) from coastal waters of China, with cytology and phylogenetic analyses based on ribosomal RNA genes
Bai, Yang, Wang, Rui, Song, Wen, Li, Lifang, Santoferrara, Luciana F, Hu, Xiaozhong
Published in BMC microbiology (14.12.2020)
Published in BMC microbiology (14.12.2020)
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Journal Article
Unexpected biodiversity of ciliates in marine samples from below the photic zone
Grattepanche, Jean-David, Santoferrara, Luciana F., McManus, George B., Katz, Laura A.
Published in Molecular ecology (01.08.2016)
Published in Molecular ecology (01.08.2016)
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Journal Article
De novo transcriptomes of a mixotrophic and a heterotrophic ciliate from marine plankton
Santoferrara, Luciana F, Guida, Stephanie, Zhang, Huan, McManus, George B
Published in PloS one (01.07.2014)
Published in PloS one (01.07.2014)
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Journal Article
Molecular signature characters complement taxonomic diagnoses: A bioinformatic approach exemplified by ciliated protists (Ciliophora, Oligotrichea)
Ganser, Maximilian H., Santoferrara, Luciana F., Agatha, Sabine
Published in Molecular phylogenetics and evolution (01.05.2022)
Published in Molecular phylogenetics and evolution (01.05.2022)
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Journal Article
Global and local DNA (meta)barcoding reveal new biogeography patterns in tintinnid ciliates
Santoferrara, Luciana F, Rubin, Ewelina, Mcmanus, George B
Published in Journal of plankton research (01.05.2018)
Published in Journal of plankton research (01.05.2018)
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Journal Article
The photic‐aphotic divide is a strong ecological and evolutionary force determining the distribution of ciliates (Alveolata, Ciliophora) in the ocean
Santoferrara, Luciana F., Qureshi, Aleena, Sher, Amina, Blanco‐Bercial, Leocadio
Published in The Journal of eukaryotic microbiology (01.09.2023)
Published in The Journal of eukaryotic microbiology (01.09.2023)
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Journal Article
Phylogenomic workflow for uncultivable microbial eukaryotes using single-cell RNA sequencing − A case study with planktonic ciliates (Ciliophora, Oligotrichea)
Shazib, Shahed U.A., Ahsan, Ragib, Leleu, Marie, McManus, George B., Katz, Laura A., Santoferrara, Luciana F.
Published in Molecular phylogenetics and evolution (15.11.2024)
Published in Molecular phylogenetics and evolution (15.11.2024)
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Journal Article
The Mixoplankton Database (MDB): Diversity of photo‐phago‐trophic plankton in form, function, and distribution across the global ocean
Mitra, Aditee, Caron, David A., Faure, Emile, Flynn, Kevin J., Leles, Suzana Gonçalves, Hansen, Per J., McManus, George B., Not, Fabrice, Rosario Gomes, Helga, Santoferrara, Luciana F., Stoecker, Diane K., Tillmann, Urban
Published in The Journal of eukaryotic microbiology (01.07.2023)
Published in The Journal of eukaryotic microbiology (01.07.2023)
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Journal Article
Genome architecture used to supplement species delineation in two cryptic marine ciliates
Smith, Susan A., Santoferrara, Luciana F., Katz, Laura A., McManus, George B.
Published in Molecular ecology resources (01.11.2022)
Published in Molecular ecology resources (01.11.2022)
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Journal Article
Pyrosequencing for assessing diversity of eukaryotic microbes: analysis of data on marine planktonic ciliates and comparison with traditional methods
Santoferrara, Luciana F, Grattepanche, Jean‐David, Katz, Laura A, McManus, George B
Published in Environmental microbiology (01.09.2014)
Published in Environmental microbiology (01.09.2014)
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Journal Article
EukRef‐Ciliophora: a manually curated, phylogeny‐based database of small subunit rRNA gene sequences of ciliates
Boscaro, Vittorio, Santoferrara, Luciana F., Zhang, Qianqian, Gentekaki, Eleni, Syberg‐Olsen, Mitchell J., del Campo, Javier, Keeling, Patrick J.
Published in Environmental microbiology (01.06.2018)
Published in Environmental microbiology (01.06.2018)
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Journal Article
Integrating dimensions of biodiversity in choreotrichs and oligotrichs of marine plankton
Santoferrara, Luciana F, McManus, George B
Published in European journal of protistology (01.10.2017)
Published in European journal of protistology (01.10.2017)
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