AggScore: Prediction of aggregation‐prone regions in proteins based on the distribution of surface patches
Sankar, Kannan, Krystek, Stanley R., Carl, Stephen M., Day, Tyler, Maier, Johannes K. X.
Published in Proteins, structure, function, and bioinformatics (01.11.2018)
Published in Proteins, structure, function, and bioinformatics (01.11.2018)
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Journal Article
A Descriptor Set for Quantitative Structure‐property Relationship Prediction in Biologics
Sankar, Kannan, Trainor, Kyle, Blazer, Levi L., Adams, Jarrett J., Sidhu, Sachdev S., Day, Tyler, Meiering, Elizabeth, Maier, Johannes K. X.
Published in Molecular informatics (01.09.2022)
Published in Molecular informatics (01.09.2022)
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Journal Article
Molecular determinants of cadherin ideal bond formation: Conformation-dependent unbinding on a multidimensional landscape
Manibog, Kristine, Sankar, Kannan, Kim, Sun-Ae, Zhang, Yunxiang, Jernigan, Robert L., Sivasankar, Sanjeevi
Published in Proceedings of the National Academy of Sciences - PNAS (27.09.2016)
Published in Proceedings of the National Academy of Sciences - PNAS (27.09.2016)
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Journal Article
Prediction of methionine oxidation risk in monoclonal antibodies using a machine learning method
Sankar, Kannan, Hoi, Kam Hon, Yin, Yizhou, Ramachandran, Prasanna, Andersen, Nisana, Hilderbrand, Amy, McDonald, Paul, Spiess, Christoph, Zhang, Qing
Published in mAbs (17.11.2018)
Published in mAbs (17.11.2018)
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Journal Article
Structure and function of LCI1: a plasma membrane CO2 channel in the Chlamydomonas CO2 concentrating mechanism
Kono, Alfredo, Chou, Tsung‐Han, Radhakrishnan, Abhijith, Bolla, Jani Reddy, Sankar, Kannan, Shome, Sayane, Su, Chih‐Chia, Jernigan, Robert L., Robinson, Carol V., Yu, Edward W., Spalding, Martin H.
Published in The Plant journal : for cell and molecular biology (01.06.2020)
Published in The Plant journal : for cell and molecular biology (01.06.2020)
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Journal Article
Highland games: A benchmarking exercise in predicting biophysical and drug properties of monoclonal antibodies from amino acid sequences
Coffman, Jonathan, Marques, Bruno, Orozco, Raquel, Aswath, Minni, Mohammad, Hasan, Zimmermann, Eike, Khouri, Joelle, Griesbach, Jan, Izadi, Saeed, Williams, Ambrose, Sankar, Kannan, Walters, Benjamin, Lin, Jasper, Hepbildikler, Stefan, Schiel, John, Welsh, John, Ferreira, Gisela, Delmar, Jared, Mody, Neil, Afdahl, Christopher, Cui, Tingting, Khalaf, Rushd, Hanke, Alexander, Pampel, Lars, Parimal, Siddharth, Hong, Xuan, Patil, Ujwal, Pollard, Jennifer, Insaidoo, Francis, Robinson, Julie, Chandra, Divya, Blanco, Marco, Panchal, Jainik, Soundararajan, Soundara, Roush, David, Tugcu, Nihal, Cramer, Steven, Haynes, Charles, Willson, Richard C.
Published in Biotechnology and bioengineering (01.07.2020)
Published in Biotechnology and bioengineering (01.07.2020)
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Journal Article
Structural differences and differential expression among rhabdomeric opsins reveal functional change after gene duplication in the bay scallop, Argopecten irradians (Pectinidae)
Porath-Krause, Anita J, Pairett, Autum N, Faggionato, Davide, Birla, Bhagyashree S, Sankar, Kannan, Serb, Jeanne M
Published in BMC evolutionary biology (17.11.2016)
Published in BMC evolutionary biology (17.11.2016)
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Journal Article
Computational Ways to Enhance Protein Inhibitor Design
Jernigan, Robert L, Sankar, Kannan, Jia, Kejue, Faraggi, Eshel, Kloczkowski, Andrzej
Published in Frontiers in molecular biosciences (03.02.2021)
Published in Frontiers in molecular biosciences (03.02.2021)
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Journal Article
Antibody interfaces revealed through structural mining
Yin, Yizhou, Romei, Matthew G., Sankar, Kannan, Pal, Lipika R., Hoi, Kam Hon, Yang, Yanli, Leonard, Brandon, De Leon Boenig, Gladys, Kumar, Nikit, Matsumoto, Marissa, Payandeh, Jian, Harris, Seth F., Moult, John, Lazar, Greg A.
Published in Computational and structural biotechnology journal (01.01.2022)
Published in Computational and structural biotechnology journal (01.01.2022)
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Journal Article
Association of Putative Members to Family of Mosquito Odorant Binding Proteins: Scoring Scheme Using Fuzzy Functional Templates and Cys Residue Positions
Manoharan, Malini, Sankar, Kannan, Offmann, Bernard, Ramanathan, Sowdhamini
Published in Bioinformatics and Biology Insights (01.01.2013)
Published in Bioinformatics and Biology Insights (01.01.2013)
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Journal Article
DOR - a Database of Olfactory Receptors - Integrated Repository for Sequence and Secondary Structural Information of Olfactory Receptors in Selected Eukaryotic Genomes
Nagarathnam, Balasubramanian, Karpe, Snehal D., Harini, Krishnan, Sankar, Kannan, Iftekhar, Mohammed, Rajesh, Durairaj, Giji, Sadasivam, Archunan, Govidaraju, Balakrishnan, Veluchamy, Gromiha, M. Michael, Nemoto, Wataru, Fukui, Kazhuhiko, Sowdhamini, Ramanathan
Published in Bioinformatics and Biology Insights (01.01.2014)
Published in Bioinformatics and Biology Insights (01.01.2014)
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Journal Article
DOR--a database of olfactory receptors--integrated repository for sequence and secondary structural information of olfactory receptors in selected eukaryotic genomes
Nagarathnam, Balasubramanian, Karpe, Snehal D, Harini, Krishnan, Sankar, Kannan, Iftekhar, Mohammed, Rajesh, Durairaj, Giji, Sadasivam, Archunan, Govidaraju, Balakrishnan, Veluchamy, Gromiha, M. Michael, Nemoto, Wataru, Fukui, Kazhuhiko, Sowdhamini, Ramanathan
Published in Bioinformatics and biology insights (12.06.2014)
Published in Bioinformatics and biology insights (12.06.2014)
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Journal Article
Simulated Drug Efflux for the AbgT Family of Membrane Transporters
Shome, Sayane, Sankar, Kannan, Jernigan, Robert L.
Published in Journal of chemical information and modeling (22.11.2021)
Published in Journal of chemical information and modeling (22.11.2021)
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Journal Article
Knowledge-based entropies improve the identification of native protein structures
Sankar, Kannan, Jia, Kejue, Jernigan, Robert L.
Published in Proceedings of the National Academy of Sciences - PNAS (14.03.2017)
Published in Proceedings of the National Academy of Sciences - PNAS (14.03.2017)
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Journal Article
TM-MOTIF: an alignment viewer to annotate predicted transmembrane helices and conserved motifs in aligned set of sequences
Nagarathnam, Balasubramanian, Sankar, Kannan, Dharnidharka, Varadhan, Balakrishnan, Veluchamy, Archunan, Govindaraju, Sowdhamini, Ramanathan
Published in Bioinformation (01.01.2011)
Published in Bioinformation (01.01.2011)
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Journal Article
Directional Force Originating from ATP Hydrolysis Drives the GroEL Conformational Change
Liu, Jie, Sankar, Kannan, Wang, Yuan, Jia, Kejue, Jernigan, Robert L.
Published in Biophysical journal (25.04.2017)
Published in Biophysical journal (25.04.2017)
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Journal Article
Altered dynamics upon oligomerization corresponds to key functional sites
Mishra, Sambit Kumar, Sankar, Kannan, Jernigan, Robert L.
Published in Proteins, structure, function, and bioinformatics (01.08.2017)
Published in Proteins, structure, function, and bioinformatics (01.08.2017)
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Journal Article