JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles
Castro-Mondragon, Jaime A, Riudavets-Puig, Rafael, Rauluseviciute, Ieva, Berhanu Lemma, Roza, Turchi, Laura, Blanc-Mathieu, Romain, Lucas, Jeremy, Boddie, Paul, Khan, Aziz, Manosalva Pérez, Nicolás, Fornes, Oriol, Leung, Tiffany Y, Aguirre, Alejandro, Hammal, Fayrouz, Schmelter, Daniel, Baranasic, Damir, Ballester, Benoit, Sandelin, Albin, Lenhard, Boris, Vandepoele, Klaas, Wasserman, Wyeth W, Parcy, François, Mathelier, Anthony
Published in Nucleic acids research (07.01.2022)
Published in Nucleic acids research (07.01.2022)
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JASPAR 2020: update of the open-access database of transcription factor binding profiles
Fornes, Oriol, Castro-Mondragon, Jaime A, Khan, Aziz, van der Lee, Robin, Zhang, Xi, Richmond, Phillip A, Modi, Bhavi P, Correard, Solenne, Gheorghe, Marius, Baranašić, Damir, Santana-Garcia, Walter, Tan, Ge, Chèneby, Jeanne, Ballester, Benoit, Parcy, François, Sandelin, Albin, Lenhard, Boris, Wasserman, Wyeth W, Mathelier, Anthony
Published in Nucleic acids research (08.01.2020)
Published in Nucleic acids research (08.01.2020)
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JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework
Khan, Aziz, Fornes, Oriol, Stigliani, Arnaud, Gheorghe, Marius, Castro-Mondragon, Jaime A, van der Lee, Robin, Bessy, Adrien, Chèneby, Jeanne, Kulkarni, Shubhada R, Tan, Ge, Baranasic, Damir, Arenillas, David J, Sandelin, Albin, Vandepoele, Klaas, Lenhard, Boris, Ballester, Benoît, Wasserman, Wyeth W, Parcy, François, Mathelier, Anthony
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
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JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles
Mathelier, Anthony, Fornes, Oriol, Arenillas, David J, Chen, Chih-Yu, Denay, Grégoire, Lee, Jessica, Shi, Wenqiang, Shyr, Casper, Tan, Ge, Worsley-Hunt, Rebecca, Zhang, Allen W, Parcy, François, Lenhard, Boris, Sandelin, Albin, Wasserman, Wyeth W
Published in Nucleic acids research (04.01.2016)
Published in Nucleic acids research (04.01.2016)
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Characterization of Arabidopsis thaliana Promoter Bidirectionality and Antisense RNAs by Inactivation of Nuclear RNA Decay Pathways
Thieffry, Axel, Vigh, Maria Louisa, Bornholdt, Jette, Ivanov, Maxim, Brodersen, Peter, Sandelin, Albin
Published in The Plant cell (01.06.2020)
Published in The Plant cell (01.06.2020)
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Identification of a Nuclear Exosome Decay Pathway for Processed Transcripts
Meola, Nicola, Domanski, Michal, Karadoulama, Evdoxia, Chen, Yun, Gentil, Coline, Pultz, Dennis, Vitting-Seerup, Kristoffer, Lykke-Andersen, Søren, Andersen, Jens S., Sandelin, Albin, Jensen, Torben Heick
Published in Molecular cell (03.11.2016)
Published in Molecular cell (03.11.2016)
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Journal Article
JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework
Khan, Aziz, Fornes, Oriol, Stigliani, Arnaud, Gheorghe, Marius, Castro-Mondragon, Jaime A, van der Lee, Robin, Bessy, Adrien, Chèneby, Jeanne, Kulkarni, Shubhada R, Tan, Ge, Baranasic, Damir, Arenillas, David J, Sandelin, Albin, Vandepoele, Klaas, Lenhard, Boris, Ballester, Benoît, Wasserman, Wyeth W, Parcy, François, Mathelier, Anthony
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
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Journal Article
JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles
Mathelier, Anthony, Zhao, Xiaobei, Zhang, Allen W, Parcy, François, Worsley-Hunt, Rebecca, Arenillas, David J, Buchman, Sorana, Chen, Chih-yu, Chou, Alice, Ienasescu, Hans, Lim, Jonathan, Shyr, Casper, Tan, Ge, Zhou, Michelle, Lenhard, Boris, Sandelin, Albin, Wasserman, Wyeth W
Published in Nucleic acids research (01.01.2014)
Published in Nucleic acids research (01.01.2014)
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Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis
Pauli, Andrea, Valen, Eivind, Lin, Michael F, Garber, Manuel, Vastenhouw, Nadine L, Levin, Joshua Z, Fan, Lin, Sandelin, Albin, Rinn, John L, Regev, Aviv, Schier, Alexander F
Published in Genome research (01.03.2012)
Published in Genome research (01.03.2012)
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CAGEfightR: analysis of 5'-end data using R/Bioconductor
Thodberg, Malte, Thieffry, Axel, Vitting-Seerup, Kristoffer, Andersson, Robin, Sandelin, Albin
Published in BMC bioinformatics (04.10.2019)
Published in BMC bioinformatics (04.10.2019)
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Mesenchymal-epithelial crosstalk shapes intestinal regionalisation via Wnt and Shh signalling
Maimets, Martti, Pedersen, Marianne Terndrup, Guiu, Jordi, Dreier, Jes, Thodberg, Malte, Antoku, Yasuko, Schweiger, Pawel J, Rib, Leonor, Bressan, Raul Bardini, Miao, Yi, Garcia, K Christopher, Sandelin, Albin, Serup, Palle, Jensen, Kim B
Published in Nature communications (07.02.2022)
Published in Nature communications (07.02.2022)
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JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles
Portales-Casamar, Elodie, Thongjuea, Supat, Kwon, Andrew T, Arenillas, David, Zhao, Xiaobei, Valen, Eivind, Yusuf, Dimas, Lenhard, Boris, Wasserman, Wyeth W, Sandelin, Albin
Published in Nucleic acids research (01.01.2010)
Published in Nucleic acids research (01.01.2010)
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Nuclear stability and transcriptional directionality separate functionally distinct RNA species
Andersson, Robin, Refsing Andersen, Peter, Valen, Eivind, Core, Leighton J, Bornholdt, Jette, Boyd, Mette, Heick Jensen, Torben, Sandelin, Albin
Published in Nature communications (12.11.2014)
Published in Nature communications (12.11.2014)
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