Superspreading events in the transmission dynamics of SARS-CoV-2: Opportunities for interventions and control
Althouse, Benjamin M, Wenger, Edward A, Miller, Joel C, Scarpino, Samuel V, Allard, Antoine, Hébert-Dufresne, Laurent, Hu, Hao
Published in PLoS biology (01.11.2020)
Published in PLoS biology (01.11.2020)
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Epidemiological data from the COVID-19 outbreak, real-time case information
Xu, Bo, Gutierrez, Bernardo, Mekaru, Sumiko, Sewalk, Kara, Goodwin, Lauren, Loskill, Alyssa, Cohn, Emily L., Hswen, Yulin, Hill, Sarah C., Cobo, Maria M., Zarebski, Alexander E., Li, Sabrina, Wu, Chieh-Hsi, Hulland, Erin, Morgan, Julia D., Wang, Lin, O’Brien, Katelynn, Scarpino, Samuel V., Brownstein, John S., Pybus, Oliver G., Pigott, David M., Kraemer, Moritz U. G.
Published in Scientific Data (24.03.2020)
Published in Scientific Data (24.03.2020)
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The effect of human mobility and control measures on the COVID-19 epidemic in China
Kraemer, Moritz U G, Yang, Chia-Hung, Gutierrez, Bernardo, Wu, Chieh-Hsi, Klein, Brennan, Pigott, David M, du Plessis, Louis, Faria, Nuno R, Li, Ruoran, Hanage, William P, Brownstein, John S, Layan, Maylis, Vespignani, Alessandro, Tian, Huaiyu, Dye, Christopher, Pybus, Oliver G, Scarpino, Samuel V
Published in Science (01.05.2020)
Published in Science (01.05.2020)
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Macroscopic patterns of interacting contagions are indistinguishable from social reinforcement
Hébert-Dufresne, Laurent, Scarpino, Samuel V., Young, Jean-Gabriel
Published in Nature physics (01.04.2020)
Published in Nature physics (01.04.2020)
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The ensemble of gene regulatory networks at mutation-selection balance
Yang, Chia-Hung, Scarpino, Samuel V
Published in Journal of the Royal Society interface (04.01.2023)
Published in Journal of the Royal Society interface (04.01.2023)
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Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence
Kraemer, Moritz U G, Hill, Verity, Ruis, Christopher, Dellicour, Simon, Bajaj, Sumali, McCrone, John T, Baele, Guy, Parag, Kris V, Battle, Anya Lindström, Gutierrez, Bernardo, Jackson, Ben, Colquhoun, Rachel, O'Toole, Áine, Klein, Brennan, Vespignani, Alessandro, Volz, Erik, Faria, Nuno R, Aanensen, David M, Loman, Nicholas J, du Plessis, Louis, Cauchemez, Simon, Rambaut, Andrew, Scarpino, Samuel V, Pybus, Oliver G
Published in Science (20.08.2021)
Published in Science (20.08.2021)
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Mobile phone data for informing public health actions across the COVID-19 pandemic life cycle
Oliver, Nuria, Lepri, Bruno, Sterly, Harald, Lambiotte, Renaud, Deletaille, Sébastien, De Nadai, Marco, Letouzé, Emmanuel, Salah, Albert Ali, Benjamins, Richard, Cattuto, Ciro, Colizza, Vittoria, de Cordes, Nicolas, Fraiberger, Samuel P, Koebe, Till, Lehmann, Sune, Murillo, Juan, Pentland, Alex, Pham, Phuong N, Pivetta, Frédéric, Saramäki, Jari, Scarpino, Samuel V, Tizzoni, Michele, Verhulst, Stefaan, Vinck, Patrick
Published in Science Advances (01.06.2020)
Published in Science Advances (01.06.2020)
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Mask-wearing and control of SARS-CoV-2 transmission in the USA: a cross-sectional study
Rader, Benjamin, White, Laura F, Burns, Michael R, Chen, Jack, Brilliant, Joseph, Cohen, Jon, Shaman, Jeffrey, Brilliant, Larry, Kraemer, Moritz U G, Hawkins, Jared B, Scarpino, Samuel V, Astley, Christina M, Brownstein, John S
Published in The Lancet. Digital health (01.03.2021)
Published in The Lancet. Digital health (01.03.2021)
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The effect of eviction moratoria on the transmission of SARS-CoV-2
Nande, Anjalika, Sheen, Justin, Walters, Emma L., Klein, Brennan, Chinazzi, Matteo, Gheorghe, Andrei H., Adlam, Ben, Shinnick, Julianna, Tejeda, Maria Florencia, Scarpino, Samuel V., Vespignani, Alessandro, Greenlee, Andrew J., Schneider, Daniel, Levy, Michael Z., Hill, Alison L.
Published in Nature communications (15.04.2021)
Published in Nature communications (15.04.2021)
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The risk of sustained sexual transmission of Zika is underestimated
Allard, Antoine, Althouse, Benjamin M, Hébert-Dufresne, Laurent, Scarpino, Samuel V
Published in PLoS pathogens (01.09.2017)
Published in PLoS pathogens (01.09.2017)
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Socioeconomic bias in influenza surveillance
Scarpino, Samuel V, Scott, James G, Eggo, Rosalind M, Clements, Bruce, Dimitrov, Nedialko B, Meyers, Lauren Ancel
Published in PLoS computational biology (01.07.2020)
Published in PLoS computational biology (01.07.2020)
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Applications of predictive modelling early in the COVID-19 epidemic
Poletto, Chiara, Scarpino, Samuel V, Volz, Erik M
Published in The Lancet. Digital health (01.10.2020)
Published in The Lancet. Digital health (01.10.2020)
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Design Strategies for Efficient Arbovirus Surveillance
Scarpino, Samuel V, Meyers, Lauren Ancel, Johansson, Michael A
Published in Emerging infectious diseases (01.04.2017)
Published in Emerging infectious diseases (01.04.2017)
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Opinion: Mathematical models: A key tool for outbreak response
Lofgren, Eric T., Halloran, M. Elizabeth, Rivers, Caitlin M., Drake, John M., Porco, Travis C., Lewis, Bryan, Yang, Wan, Vespignani, Alessandro, Shaman, Jeffrey, Eisenberg, Joseph N. S., Eisenberg, Marisa C., Marathe, Madhav, Scarpino, Samuel V., Alexander, Kathleen A., Meza, Rafael, Ferrari, Matthew J., Hyman, James M., Meyers, Lauren A., Eubank, Stephen
Published in Proceedings of the National Academy of Sciences - PNAS (23.12.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (23.12.2014)
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About PAR: The distinct evolutionary dynamics of the pseudoautosomal region
Otto, Sarah P, Pannell, John R, Peichel, Catherine L, Ashman, Tia-Lynn, Charlesworth, Deborah, Chippindale, Adam K, Delph, Lynda F, Guerrero, Rafael F, Scarpino, Samuel V, McAllister, Bryant F
Published in Trends in genetics (01.09.2011)
Published in Trends in genetics (01.09.2011)
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