πVAE: a stochastic process prior for Bayesian deep learning with MCMC
Mishra, Swapnil, Flaxman, Seth, Berah, Tresnia, Zhu, Harrison, Pakkanen, Mikko, Bhatt, Samir
Published in Statistics and computing (2022)
Published in Statistics and computing (2022)
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Journal Article
Estimating spatiotemporally varying malaria reproduction numbers in a near elimination setting
Routledge, Isobel, Chevéz, José Eduardo Romero, Cucunubá, Zulma M., Rodriguez, Manuel Gomez, Guinovart, Caterina, Gustafson, Kyle B., Schneider, Kammerle, Walker, Patrick G.T., Ghani, Azra C., Bhatt, Samir
Published in Nature communications (26.06.2018)
Published in Nature communications (26.06.2018)
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Journal Article
Updates to the zoonotic niche map of Ebola virus disease in Africa
Pigott, David M, Millear, Anoushka I, Earl, Lucas, Morozoff, Chloe, Han, Barbara A, Shearer, Freya M, Weiss, Daniel J, Brady, Oliver J, Kraemer, Moritz Ug, Moyes, Catherine L, Bhatt, Samir, Gething, Peter W, Golding, Nick, Hay, Simon I
Published in eLife (14.07.2016)
Published in eLife (14.07.2016)
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Journal Article
Population coverage of artemisinin-based combination treatment in children younger than 5 years with fever and Plasmodium falciparum infection in Africa, 2003–2015: a modelling study using data from national surveys
Bennett, Adam, Dr, Bisanzio, Donal, PhD, Yukich, Joshua O, PhD, Mappin, Bonnie, MSc, Fergus, Cristin A, MPH, Lynch, Michael, MD, Cibulskis, Richard E, PhD, Bhatt, Samir, PhD, Weiss, Daniel J, PhD, Cameron, Ewan, PhD, Gething, Peter W, PhD, Eisele, Thomas P, Prof
Published in The Lancet global health (01.04.2017)
Published in The Lancet global health (01.04.2017)
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Journal Article
Defining the relationship between infection prevalence and clinical incidence of Plasmodium falciparum malaria
Cameron, Ewan, Battle, Katherine E., Bhatt, Samir, Weiss, Daniel J., Bisanzio, Donal, Mappin, Bonnie, Dalrymple, Ursula, Hay, Simon I., Smith, David L., Griffin, Jamie T., Wenger, Edward A., Eckhoff, Philip A., Smith, Thomas A., Penny, Melissa A., Gething, Peter W.
Published in Nature communications (08.09.2015)
Published in Nature communications (08.09.2015)
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Journal Article
Long-term evolution and transmission dynamics of swine influenza A virus
Vijaykrishna, Dhanasekaran, Smith, Gavin J. D., Pybus, Oliver G., Zhu, Huachen, Bhatt, Samir, Poon, Leo L. M., Riley, Steven, Bahl, Justin, Ma, Siu K., Cheung, Chung L., Perera, Ranawaka A. P. M., Chen, Honglin, Shortridge, Kennedy F., Webby, Richard J., Webster, Robert G., Guan, Yi, Peiris, J. S. Malik
Published in Nature (London) (26.05.2011)
Published in Nature (London) (26.05.2011)
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Journal Article
The impact of the COVID-19 pandemic on patterns of attendance at emergency departments in two large London hospitals: an observational study
Vollmer, Michaela A C, Radhakrishnan, Sreejith, Kont, Mara D, Flaxman, Seth, Bhatt, Samir, Costelloe, Ceire, Honeyford, Kate, Aylin, Paul, Cooke, Graham, Redhead, Julian, Sanders, Alison, Mangan, Helen, White, Peter J, Ferguson, Neil, Hauck, Katharina, Nayagam, Shevanthi, Perez-Guzman, Pablo N
Published in BMC health services research (23.09.2021)
Published in BMC health services research (23.09.2021)
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Journal Article
Estimating malaria incidence from routine health facility-based surveillance data in Uganda
Epstein, Adrienne, Namuganga, Jane Frances, Kamya, Emmanuel Victor, Nankabirwa, Joaniter I, Bhatt, Samir, Rodriguez-Barraquer, Isabel, Staedke, Sarah G, Kamya, Moses R, Dorsey, Grant, Greenhouse, Bryan
Published in Malaria journal (02.12.2020)
Published in Malaria journal (02.12.2020)
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Journal Article
Modelling the impact of the tier system on SARS-CoV-2 transmission in the UK between the first and second national lockdowns
Laydon, Daniel J, Mishra, Swapnil, Hinsley, Wes R, Samartsidis, Pantelis, Flaxman, Seth, Gandy, Axel, Ferguson, Neil M, Bhatt, Samir
Published in BMJ open (22.04.2021)
Published in BMJ open (22.04.2021)
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Journal Article
An archetypes approach to malaria intervention impact mapping: a new framework and example application
Bertozzi-Villa, Amelia, Bever, Caitlin A, Gerardin, Jaline, Proctor, Joshua L, Wu, Meikang, Harding, Dennis, Hollingsworth, T Deirdre, Bhatt, Samir, Gething, Peter W
Published in Malaria journal (26.04.2023)
Published in Malaria journal (26.04.2023)
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Journal Article
A unified machine learning approach to time series forecasting applied to demand at emergency departments
Vollmer, Michaela A C, Glampson, Ben, Mellan, Thomas, Mishra, Swapnil, Mercuri, Luca, Costello, Ceire, Klaber, Robert, Cooke, Graham, Flaxman, Seth, Bhatt, Samir
Published in BMC emergency medicine (18.01.2021)
Published in BMC emergency medicine (18.01.2021)
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Journal Article
Estimating Geographical Variation in the Risk of Zoonotic Plasmodium knowlesi Infection in Countries Eliminating Malaria
Shearer, Freya M, Huang, Zhi, Weiss, Daniel J, Wiebe, Antoinette, Gibson, Harry S, Battle, Katherine E, Pigott, David M, Brady, Oliver J, Putaporntip, Chaturong, Jongwutiwes, Somchai, Lau, Yee Ling, Manske, Magnus, Amato, Roberto, Elyazar, Iqbal R F, Vythilingam, Indra, Bhatt, Samir, Gething, Peter W, Singh, Balbir, Golding, Nick, Hay, Simon I, Moyes, Catherine L
Published in PLoS neglected tropical diseases (05.08.2016)
Published in PLoS neglected tropical diseases (05.08.2016)
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Journal Article
Danish Pathology Life Course (PATHOLIFE) cohort: a register based cohort extending upon a national tissue biobank
Nielsen, Pernille Yde, Bartholdy, Andreas, Gjerdrum, Lise Mette Rahbek, Westendorp, Rudi Gerardus Johannes, Mortensen, Laust Hvas, Bhatt, Samir, Jensen, Majken Karoline
Published in BMJ open (21.04.2023)
Published in BMJ open (21.04.2023)
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Journal Article
Correction: Quantifying Online News Media Coverage of the COVID-19 Pandemic: Text Mining Study and Resource
Krawczyk, Konrad, Chelkowski, Tadeusz, Laydon, Daniel J, Mishra, Swapnil, Xifara, Denise, Gibert, Benjamin, Flaxman, Seth, Mellan, Thomas, Schwämmle, Veit, Röttger, Richard, Hadsund, Johannes T, Bhatt, Samir
Published in Journal of medical Internet research (14.07.2021)
Published in Journal of medical Internet research (14.07.2021)
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Journal Article
Tracking progress towards malaria elimination in China: Individual-level estimates of transmission and its spatiotemporal variation using a diffusion network approach
Routledge, Isobel, Lai, Shengjie, Battle, Katherine E, Ghani, Azra C, Gomez-Rodriguez, Manuel, Gustafson, Kyle B, Mishra, Swapnil, Unwin, Juliette, Proctor, Joshua L, Tatem, Andrew J, Li, Zhongjie, Bhatt, Samir
Published in PLoS computational biology (23.03.2020)
Published in PLoS computational biology (23.03.2020)
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Journal Article
The changing landscape of Plasmodium falciparum drug resistance in the Democratic Republic of Congo
Deutsch-Feldman, Molly, Aydemir, Ozkan, Carrel, Margaret, Brazeau, Nicholas F, Bhatt, Samir, Bailey, Jeffrey A, Kashamuka, Melchior, Tshefu, Antoinette K, Taylor, Steve M, Juliano, Jonathan J, Meshnick, Steven R, Verity, Robert
Published in BMC infectious diseases (22.10.2019)
Published in BMC infectious diseases (22.10.2019)
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Journal Article
Quantifying Changes in Vaccine Coverage in Mainstream Media as a Result of the COVID-19 Outbreak: Text Mining Study
Christensen, Bente, Laydon, Daniel, Chelkowski, Tadeusz, Jemielniak, Dariusz, Vollmer, Michaela, Bhatt, Samir, Krawczyk, Konrad
Published in JMIR infodemiology (20.09.2022)
Published in JMIR infodemiology (20.09.2022)
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Journal Article
A dataset of non-pharmaceutical interventions on SARS-CoV-2 in Europe
Altman, George, Ahuja, Janvi, Monrad, Joshua Teperowski, Dhaliwal, Gurpreet, Rogers-Smith, Charlie, Leech, Gavin, Snodin, Benedict, Sandbrink, Jonas B., Finnveden, Lukas, Norman, Alexander John, Oehm, Sebastian B., Sandkühler, Julia Fabienne, Kulveit, Jan, Flaxman, Seth, Gal, Yarin, Mishra, Swapnil, Bhatt, Samir, Sharma, Mrinank, Mindermann, Sören, Brauner, Jan Markus
Published in Scientific data (01.04.2022)
Published in Scientific data (01.04.2022)
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