Gene network shaping of inherent noise spectra
Simpson, M. L, Austin, D. W, Allen, M. S, McCollum, J. M, Dar, R. D, Wilgus, J. R, Sayler, G. S, Samatova, N. F, Cox, C. D
Published in Nature (02.02.2006)
Published in Nature (02.02.2006)
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Journal Article
On the data-driven inference of modulatory networks in climate science: an application to West African rainfall
González II, D. L., Angus, M. P., Tetteh, I. K., Bello, G. A., Padmanabhan, K., Pendse, S. V., Srinivas, S., Yu, J., Semazzi, F., Kumar, V., Samatova, N. F.
Published in Nonlinear processes in geophysics (01.01.2015)
Published in Nonlinear processes in geophysics (01.01.2015)
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Journal Article
Group analysis of the thin film dewetting equation
Meleshko, S.V., Samatova, N.F., Melechko, A.V.
Published in International journal of non-linear mechanics (2012)
Published in International journal of non-linear mechanics (2012)
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Journal Article
Coupling graph perturbation theory with scalable parallel algorithms for large-scale enumeration of maximal cliques in biological graphs
Samatova, N F, Schmidt, M C, Hendrix, W, Breimyer, P, Thomas, K, Park, B-H
Published in Journal of physics. Conference series (01.07.2008)
Published in Journal of physics. Conference series (01.07.2008)
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Journal Article
A scalable, parallel algorithm for maximal clique enumeration
Schmidt, Matthew C., Samatova, Nagiza F., Thomas, Kevin, Park, Byung-Hoon
Published in Journal of parallel and distributed computing (01.04.2009)
Published in Journal of parallel and distributed computing (01.04.2009)
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Journal Article
Coordinating Computation and I/O in Massively Parallel Sequence Search
Heshan Lin, Xiaosong Ma, Wuchun Feng, Samatova, N F
Published in IEEE transactions on parallel and distributed systems (01.04.2011)
Published in IEEE transactions on parallel and distributed systems (01.04.2011)
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Journal Article
Enabling Fast, Noncontiguous GPU Data Movement in Hybrid MPI+GPU Environments
Jenkins, J., Dinan, J., Balaji, P., Samatova, N. F., Thakur, R.
Published in 2012 IEEE International Conference on Cluster Computing (01.09.2012)
Published in 2012 IEEE International Conference on Cluster Computing (01.09.2012)
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Conference Proceeding
ISOBAR Preconditioner for Effective and High-throughput Lossless Data Compression
Schendel, E. R., Ye Jin, Shah, N., Chen, Jackie, Chang, C. S., Seung-Hoe Ku, Ethier, S., Klasky, S., Latham, R., Ross, R., Samatova, N. F.
Published in 2012 IEEE 28th International Conference on Data Engineering (01.04.2012)
Published in 2012 IEEE 28th International Conference on Data Engineering (01.04.2012)
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Conference Proceeding
MLOC: Multi-level Layout Optimization Framework for Compressed Scientific Data Exploration with Heterogeneous Access Patterns
Zhenhuan Gong, Rogers, T., Jenkins, J., Kolla, H., Ethier, S., Chen, Jackie, Ross, R., Klasky, S., Samatova, N. F.
Published in 2012 41st International Conference on Parallel Processing (01.09.2012)
Published in 2012 41st International Conference on Parallel Processing (01.09.2012)
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Conference Proceeding
On parameterized complexity of the Multi-MCS problem
Chen, Wenbin, Schmidt, Matthew C., Samatova, Nagiza F.
Published in Theoretical computer science (17.05.2009)
Published in Theoretical computer science (17.05.2009)
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Journal Article
Improving I/O Throughput with PRIMACY: Preconditioning ID-Mapper for Compressing Incompressibility
Shah, N., Schendel, E. R., Lakshminarasimhan, S., Pendse, S. V., Rogers, T., Samatova, N. F.
Published in 2012 IEEE International Conference on Cluster Computing (01.09.2012)
Published in 2012 IEEE International Conference on Cluster Computing (01.09.2012)
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Conference Proceeding
The sorting direct method for stochastic simulation of biochemical systems with varying reaction execution behavior
McCollum, James M., Peterson, Gregory D., Cox, Chris D., Simpson, Michael L., Samatova, Nagiza F.
Published in Computational biology and chemistry (01.02.2006)
Published in Computational biology and chemistry (01.02.2006)
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Journal Article
A Multi-Level Cache Model for Run-Time Optimization of Remote Visualization
Sisneros, R., Jones, C., Jian Huang, Jinzhu Gao, Byung-Hoon Park, Samatova, N.F.
Published in IEEE transactions on visualization and computer graphics (01.09.2007)
Published in IEEE transactions on visualization and computer graphics (01.09.2007)
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Journal Article
Detecting and Tracking Community Dynamics in Evolutionary Networks
Zhengzhang Chen, Wilson, K A, Ye Jin, Hendrix, W, Samatova, N F
Published in 2010 IEEE International Conference on Data Mining Workshops (01.12.2010)
Published in 2010 IEEE International Conference on Data Mining Workshops (01.12.2010)
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Conference Proceeding
In silico Discovery of Enzyme–Substrate Specificity-determining Residue Clusters
Yu, Gong-Xin, Park, Byung-Hoon, Chandramohan, Praveen, Munavalli, Rajesh, Geist, Al, Samatova, Nagiza F.
Published in Journal of molecular biology (07.10.2005)
Published in Journal of molecular biology (07.10.2005)
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Journal Article