SABER amplifies FISH: enhanced multiplexed imaging of RNA and DNA in cells and tissues
Kishi, Jocelyn Y., Lapan, Sylvain W., Beliveau, Brian J., West, Emma R., Zhu, Allen, Sasaki, Hiroshi M., Saka, Sinem K., Wang, Yu, Cepko, Constance L., Yin, Peng
Published in Nature methods (01.06.2019)
Published in Nature methods (01.06.2019)
Get full text
Journal Article
OligoMiner provides a rapid, flexible environment for the design of genome-scale oligonucleotide in situ hybridization probes
Beliveau, Brian J., Kishi, Jocelyn Y., Nir, Guy, Sasaki, Hiroshi M., Saka, Sinem K., Nguyen, Son C., Wu, Chao-ting, Yin, Peng
Published in Proceedings of the National Academy of Sciences - PNAS (06.03.2018)
Published in Proceedings of the National Academy of Sciences - PNAS (06.03.2018)
Get full text
Journal Article
Enablers and challenges of spatial omics, a melting pot of technologies
Alexandrov, Theodore, Saez-Rodriguez, Julio, Saka, Sinem K
Published in Molecular systems biology (09.11.2023)
Published in Molecular systems biology (09.11.2023)
Get full text
Journal Article
Molecular robotic agents that survey molecular landscapes for information retrieval
Woo, Sungwook, Saka, Sinem K., Xuan, Feng, Yin, Peng
Published in Nature communications (17.04.2024)
Published in Nature communications (17.04.2024)
Get full text
Journal Article
Multiplexed 3D super-resolution imaging of whole cells using spinning disk confocal microscopy and DNA-PAINT
Schueder, Florian, Lara-Gutiérrez, Juanita, Beliveau, Brian J., Saka, Sinem K., Sasaki, Hiroshi M., Woehrstein, Johannes B., Strauss, Maximilian T., Grabmayr, Heinrich, Yin, Peng, Jungmann, Ralf
Published in Nature communications (12.12.2017)
Published in Nature communications (12.12.2017)
Get full text
Journal Article
Multiplexed in situ protein imaging using DNA-barcoded antibodies with extended hybridization chain reactions
Wang, Yu, Liu, Xiaoyu, Zeng, Yitian, Saka, Sinem K, Xie, Wenxin, Goldaracena, Isabel, Kohman, Richie E, Yin, Peng, Church, George M
Published in Nucleic acids research (27.08.2024)
Published in Nucleic acids research (27.08.2024)
Get full text
Journal Article
Multi-protein assemblies underlie the mesoscale organization of the plasma membrane
Saka, Sinem K., Honigmann, Alf, Eggeling, Christian, Hell, Stefan W., Lang, Thorsten, Rizzoli, Silvio O.
Published in Nature communications (25.07.2014)
Published in Nature communications (25.07.2014)
Get full text
Journal Article
Light-Seq: light-directed in situ barcoding of biomolecules in fixed cells and tissues for spatially indexed sequencing
Kishi, Jocelyn Y., Liu, Ninning, West, Emma R., Sheng, Kuanwei, Jordanides, Jack J., Serrata, Matthew, Cepko, Constance L., Saka, Sinem K., Yin, Peng
Published in Nature methods (01.11.2022)
Published in Nature methods (01.11.2022)
Get full text
Journal Article
Mapping molecules in scanning far-field fluorescence nanoscopy
Ta, Haisen, Keller, Jan, Haltmeier, Markus, Saka, Sinem K., Schmied, Jürgen, Opazo, Felipe, Tinnefeld, Philip, Munk, Axel, Hell, Stefan W.
Published in Nature communications (13.08.2015)
Published in Nature communications (13.08.2015)
Get full text
Journal Article
Thermal-plex: fluidic-free, rapid sequential multiplexed imaging with DNA-encoded thermal channels
Hong, Fan, Kishi, Jocelyn Y., Delgado, Ryan N., Jeong, Jiyoun, Saka, Sinem K., Su, Hanquan, Cepko, Constance L., Yin, Peng
Published in Nature methods (01.02.2024)
Published in Nature methods (01.02.2024)
Get full text
Journal Article
SpatialData: an open and universal data framework for spatial omics
Marconato, Luca, Palla, Giovanni, Yamauchi, Kevin A, Virshup, Isaac, Heidari, Elyas, Treis, Tim, Vierdag, Wouter-Michiel, Toth, Marcella, Stockhaus, Sonja, Shrestha, Rahul B, Rombaut, Benjamin, Pollaris, Lotte, Lehner, Laurens, Vöhringer, Harald, Kats, Ilia, Saeys, Yvan, Saka, Sinem K, Huber, Wolfgang, Gerstung, Moritz, Moore, Josh, Theis, Fabian J, Stegle, Oliver
Published in Nature methods (20.03.2024)
Published in Nature methods (20.03.2024)
Get full text
Journal Article
Correlated optical and isotopic nanoscopy
Saka, Sinem K., Vogts, Angela, Kröhnert, Katharina, Hillion, François, Rizzoli, Silvio O, Wessels, Johannes T.
Published in Nature communications (10.04.2014)
Published in Nature communications (10.04.2014)
Get full text
Journal Article
Immuno-SABER enables highly multiplexed and amplified protein imaging in tissues
Saka, Sinem K., Wang, Yu, Kishi, Jocelyn Y., Zhu, Allen, Zeng, Yitian, Xie, Wenxin, Kirli, Koray, Yapp, Clarence, Cicconet, Marcelo, Beliveau, Brian J., Lapan, Sylvain W., Yin, Siyuan, Lin, Millicent, Boyden, Edward S., Kaeser, Pascal S., Pihan, German, Church, George M., Yin, Peng
Published in Nature biotechnology (01.09.2019)
Published in Nature biotechnology (01.09.2019)
Get full text
Journal Article
Concurrent inhibition of CDK2 adds to the anti-tumour activity of CDK4/6 inhibition in GIST
Schaefer, Inga-Marie, Hemming, Matthew L., Lundberg, Meijun Z., Serrata, Matthew P., Goldaracena, Isabel, Liu, Ninning, Yin, Peng, Paulo, Joao A., Gygi, Steven P., George, Suzanne, Morgan, Jeffrey A., Bertagnolli, Monica M., Sicinska, Ewa T., Chu, Chen, Zheng, Shanshan, Mariño-Enríquez, Adrian, Hornick, Jason L., Raut, Chandrajit P., Ou, Wen-Bin, Demetri, George D., Saka, Sinem K., Fletcher, Jonathan A.
Published in British journal of cancer (23.11.2022)
Published in British journal of cancer (23.11.2022)
Get full text
Journal Article
A contamination-insensitive probe for imaging specific biomolecules by secondary ion mass spectrometry
Kabatas, Selda, Vreja, Ingrid C., Saka, Sinem K., Hoeschen, Carmen, Kroehnert, Katharina, Opazo, Felipe, Rizzoli, Silvio O., Diederichsen, Ulf
Published in Chemical communications (Cambridge, England) (28.08.2015)
Published in Chemical communications (Cambridge, England) (28.08.2015)
Get full text
Journal Article
핵산 검출을 위한 등온 방법, 조성물, 키트, 및 시스템
KIM YOUNGEUN, SCHAUS THOMAS E, YASEEN ADAM, JEONG JIYOUN, SAKA SINEM K, GOPALKRISHNAN NIKHIL, YIN PENG, SHENG KUANWEI, KISHI JOCELYN YOSHIKO
Year of Publication 05.01.2023
Get full text
Year of Publication 05.01.2023
Patent