Evaluation of molecular subtypes and clonal selection during establishment of patient-derived tumor xenografts from gastric adenocarcinoma
Peille, Anne-Lise, Vuaroqueaux, Vincent, Wong, Swee-Seong, Ting, Jason, Klingner, Kerstin, Zeitouni, Bruno, Landesfeind, Manuel, Kim, Woo Ho, Lee, Hyuk-Joon, Kong, Seong-Ho, Wulur, Isabella, Bray, Steven, Bronsert, Peter, Zanella, Nina, Donoho, Greg, Yang, Han-Kwang, Fiebig, Heinz-Herbert, Reinhard, Christoph, Aggarwal, Amit
Published in Communications biology (09.07.2020)
Published in Communications biology (09.07.2020)
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Genomic characterization of intrinsic and acquired resistance to cetuximab in colorectal cancer patients
Bray, Steven M, Lee, Jeeyun, Kim, Seung Tae, Hur, Joon Young, Ebert, Philip J, Calley, John N, Wulur, Isabella H, Gopalappa, Thejaswini, Wong, Swee Seong, Qian, Hui-Rong, Ting, Jason C, Liu, Jiangang, Willard, Melinda D, Novosiadly, Ruslan D, Park, Young Suk, Park, Joon Oh, Lim, Ho Yeong, Kang, Won Ki, Aggarwal, Amit, Kim, Hee Cheol, Reinhard, Christoph
Published in Scientific reports (25.10.2019)
Published in Scientific reports (25.10.2019)
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Journal Article
A Linear Size Index for Approximate Pattern Matching
Chan, Ho-Leung, Lam, Tak-Wah, Sung, Wing-Kin, Tam, Siu-Lung, Wong, Swee-Seong
Published in Combinatorial Pattern Matching (2006)
Published in Combinatorial Pattern Matching (2006)
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Book Chapter
Conference Proceeding
Improved Approximate String Matching Using Compressed Suffix Data Structures
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Book Chapter
Conference Proceeding
Whole-genome sequencing of asian lung cancers: second-hand smoke unlikely to be responsible for higher incidence of lung cancer among Asian never-smokers
Krishnan, Vidhya G, Ebert, Philip J, Ting, Jason C, Lim, Elaine, Wong, Swee-Seong, Teo, Audrey S M, Yue, Yong G, Chua, Hui-Hoon, Ma, Xiwen, Loh, Gary S L, Lin, Yuhao, Tan, Joanna H J, Yu, Kun, Zhang, Shenli, Reinhard, Christoph, Tan, Daniel S W, Peters, Brock A, Lincoln, Stephen E, Ballinger, Dennis G, Laramie, Jason M, Nilsen, Geoffrey B, Barber, Thomas D, Tan, Patrick, Hillmer, Axel M, Ng, Pauline C
Published in Cancer research (Chicago, Ill.) (01.11.2014)
Published in Cancer research (Chicago, Ill.) (01.11.2014)
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Journal Article
Progenitor-like Traits Contribute to Patient Survival and Prognosis in Oligodendroglial Tumors
NG, Felicia Soo-Lee, TAN BOON TOH, WAI HOE NG, NG, Ivan, TANG, Carol, BENG TI ANG, TING, Esther Hui-Ling, KOH, Geraldene Rong-Hui, SANDANARAJ, Edwin, PHONG, Mark, SWEE SEONG WONG, SIEW HONG LEONG, OI LIAN KON, TUCKER-KELIOGG, Greg
Published in Clinical cancer research (01.08.2012)
Published in Clinical cancer research (01.08.2012)
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Journal Article
Author Correction: Evaluation of molecular subtypes and clonal selection during establishment of patient-derived tumor xenografts from gastric adenocarcinoma
Peille, Anne-Lise, Vuaroqueaux, Vincent, Wong, Swee-Seong, Ting, Jason, Klingner, Kerstin, Zeitouni, Bruno, Landesfeind, Manuel, Kim, Woo Ho, Lee, Hyuk-Joon, Kong, Seong-Ho, Wulur, Isabella, Bray, Steven, Bronsert, Peter, Zanella, Nina, Donoho, Greg, Yang, Han-Kwang, Fiebig, Heinz-Herbert, Reinhard, Christoph, Aggarwal, Amit
Published in Communications biology (24.07.2020)
Published in Communications biology (24.07.2020)
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Journal Article
Compressed Indexes for Approximate String Matching
Chan, Ho-Leung, Lam, Tak-Wah, Sung, Wing-Kin, Tam, Siu-Lung, Wong, Swee-Seong
Published in Algorithmica (01.10.2010)
Published in Algorithmica (01.10.2010)
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Journal Article
A linear size index for approximate pattern matching
Chan, Ho-Leung, Lam, Tak-Wah, Sung, Wing-Kin, Tam, Siu-Lung, Wong, Swee-Seong
Published in Journal of discrete algorithms (Amsterdam, Netherlands) (01.12.2011)
Published in Journal of discrete algorithms (Amsterdam, Netherlands) (01.12.2011)
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Journal Article
Improved Approximate String Matching Using Compressed Suffix Data Structures
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Journal Article
Conference Proceeding
Molecular analysis of gastric cancer identifies subtypes associated with distinct clinical outcomes
Cristescu, Razvan, Lee, Jeeyun, Nebozhyn, Michael, Kim, Kyoung-Mee, Ting, Jason C, Wong, Swee Seong, Liu, Jiangang, Yue, Yong Gang, Wang, Jian, Yu, Kun, Ye, Xiang S, Do, In-Gu, Liu, Shawn, Gong, Lara, Fu, Jake, Jin, Jason Gang, Choi, Min Gew, Sohn, Tae Sung, Lee, Joon Ho, Bae, Jae Moon, Kim, Seung Tae, Park, Se Hoon, Sohn, Insuk, Jung, Sin-Ho, Tan, Patrick, Chen, Ronghua, Hardwick, James, Kang, Won Ki, Ayers, Mark, Hongyue, Dai, Reinhard, Christoph, Loboda, Andrey, Kim, Sung, Aggarwal, Amit
Published in Nature medicine (01.05.2015)
Published in Nature medicine (01.05.2015)
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Journal Article
CPS-tree: A Compact Partitioned Suffix Tree for Disk-based Indexing on Large Genome Sequences
Swee-Seong Wong, Wing-Kin Sung, Limsoon Wong
Published in 2007 IEEE 23rd International Conference on Data Engineering (01.04.2007)
Published in 2007 IEEE 23rd International Conference on Data Engineering (01.04.2007)
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Conference Proceeding
Genomic Aberrations that Activate D-type Cyclins Are Associated with Enhanced Sensitivity to the CDK4 and CDK6 Inhibitor Abemaciclib
Gong, Xueqian, Litchfield, Lacey M., Webster, Yue, Chio, Li-Chun, Wong, Swee Seong, Stewart, Trent R., Dowless, Michele, Dempsey, Jack, Zeng, Yi, Torres, Raquel, Boehnke, Karsten, Mur, Cecilia, Marugán, Carlos, Baquero, Carmen, Yu, Chunping, Bray, Steven M., Wulur, Isabella H., Bi, Chen, Chu, Shaoyou, Qian, Hui-Rong, Iversen, Philip W., Merzoug, Farhana F., Ye, Xiang S., Reinhard, Christoph, De Dios, Alfonso, Du, Jian, Caldwell, Charles W., Lallena, María José, Beckmann, Richard P., Buchanan, Sean G.
Published in Cancer cell (11.12.2017)
Published in Cancer cell (11.12.2017)
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Oncogenic BRAF Deletions That Function as Homodimers and Are Sensitive to Inhibition by RAF Dimer Inhibitor LY3009120
Chen, Shih-Hsun, Zhang, Youyan, Van Horn, Robert D, Yin, Tinggui, Buchanan, Sean, Yadav, Vipin, Mochalkin, Igor, Wong, Swee Seong, Yue, Yong Gang, Huber, Lysiane, Conti, Ilaria, Henry, James R, Starling, James J, Plowman, Gregory D, Peng, Sheng-Bin
Published in Cancer discovery (01.03.2016)
Published in Cancer discovery (01.03.2016)
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Journal Article
Genomic landscape and genetic heterogeneity in gastric adenocarcinoma revealed by whole-genome sequencing
Wong, Swee Seong, Kim, Kyoung-Mee, Ting, Jason C, Yu, Kun, Fu, Jake, Liu, Shawn, Cristescu, Razvan, Nebozhyn, Michael, Gong, Lara, Yue, Yong Gang, Wang, Jian, Ronghua, Chen, Loboda, Andrey, Hardwick, James, Liu, Xiaoqiao, Dai, Hongyue, Jin, Jason Gang, Ye, Xiang S, Kang, So Young, Do, In Gu, Park, Joon Oh, Sohn, Tae Sung, Reinhard, Christoph, Lee, Jeeyun, Kim, Sung, Aggarwal, Amit
Published in Nature communications (19.11.2014)
Published in Nature communications (19.11.2014)
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Journal Article
Molecular dissection of CRC primary tumors and their matched liver metastases reveals critical role of immune microenvironment, EMT and angiogenesis in cancer metastasis
Liu, Jiangang, Cho, Yong Beom, Hong, Hye Kyung, Wu, Song, Ebert, Philip J, Bray, Steven M, Wong, Swee Seong, Ting, Jason C, Calley, John N, Whittington, Catherine F, Bhagwat, Shripad V, Reinhard, Christoph, Wild, Robert, Nam, Do-Hyun, Aggarwal, Amit, Lee, Woo Yong, Peng, Sheng-Bin
Published in Scientific reports (01.07.2020)
Published in Scientific reports (01.07.2020)
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Journal Article
Abstract PS11-14: Advanced precision health resources in the Susan G Komen tissue bank at the IU simon comprehensive cancer center
Bray, Steven M, Wong, Swee Seong, Parikh, Baiju G, Wood, Kevin C, Rysdyk, Samuel T, Henry, Jill E, Marino, Natascia, Radovich, Milan, Storniolo, Anna Maria V
Published in Cancer research (Chicago, Ill.) (15.02.2021)
Published in Cancer research (Chicago, Ill.) (15.02.2021)
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Journal Article
Plasma ctDNA sequencing supplementary to tissue-based molecular profiling as a source of additional actionable information in advanced cancers
Hancock, Bradley Allen, Wong, Swee Seong, Sinha, Saloni, Barber, Tom, Salisbury, Benjamin A., Bray, Steven M., Smallwood, Lori A., Schneider, Bryan P., Radovich, Milan
Published in Journal of clinical oncology (20.05.2020)
Published in Journal of clinical oncology (20.05.2020)
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Journal Article
Abstract 29: Concordance of somatic mutations found in primary tumors and plasma circulating-free DNA from early and late-stage colorectal cancer patients
Bray, Steven M., Ebert, Philip J., Calley, John N., Higgs, Richard E., Wulur, Isabella H., Wong, Swee Seong, Horn, Candice L., Martinez, Ricardo, Reinhard, Christoph
Published in Clinical cancer research (01.01.2016)
Published in Clinical cancer research (01.01.2016)
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Journal Article
Abstract 849: Molecular characterization of primary tumor & the paired liver metastatic biopsies of colorectal cancer reveals a critical role of immunosuppression, EMT & angiogenesis in cancer metastasis
Liu, Jiangang, Cho, Yong Beom, Hong, Hye kyung, Wu, Song, Ebert, Philip J., Bray, Steven M., Wong, Swee Seong, Ting, Jason C., Calley, John N., Whittington, Catherine F., Bhagwat, Shripad, Bowden, Emma, Aggarwal, Amit, Reinhard, Christoph, Wild, Robert, Nam, Do-Hyun, Lee, Woo Yong, Peng, Sheng-Bin
Published in Cancer research (Chicago, Ill.) (01.07.2017)
Published in Cancer research (Chicago, Ill.) (01.07.2017)
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