Spatial mapping of protein composition and tissue organization: a primer for multiplexed antibody-based imaging
Hickey, John W, Neumann, Elizabeth K, Radtke, Andrea J, Camarillo, Jeannie M, Beuschel, Rebecca T, Albanese, Alexandre, McDonough, Elizabeth, Hatler, Julia, Wiblin, Anne E, Fisher, Jeremy, Croteau, Josh, Small, Eliza C, Sood, Anup, Caprioli, Richard M, Angelo, R Michael, Nolan, Garry P, Chung, Kwanghun, Hewitt, Stephen M, Germain, Ronald N, Spraggins, Jeffrey M, Lundberg, Emma, Snyder, Michael P, Kelleher, Neil L, Saka, Sinem K
Published in Nature methods (01.03.2022)
Published in Nature methods (01.03.2022)
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Highly multiplexed single-cell analysis of formalin-fixed, paraffin-embedded cancer tissue
Gerdes, Michael J., Sevinsky, Christopher J., Sood, Anup, Adak, Sudeshna, Bello, Musodiq O., Bordwell, Alexander, Can, Ali, Corwin, Alex, Dinn, Sean, Filkins, Robert J., Hollman, Denise, Kamath, Vidya, Kaanumalle, Sireesha, Kenny, Kevin, Larsen, Melinda, Lazare, Michael, Li, Qing, Lowes, Christina, McCulloch, Colin C., McDonough, Elizabeth, Montalto, Michael C., Pang, Zhengyu, Rittscher, Jens, Santamaria-Pang, Alberto, Sarachan, Brion D., Seel, Maximilian L., Seppo, Antti, Shaikh, Kashan, Sui, Yunxia, Zhang, Jingyu, Ginty, Fiona
Published in Proceedings of the National Academy of Sciences - PNAS (16.07.2013)
Published in Proceedings of the National Academy of Sciences - PNAS (16.07.2013)
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An atlas of inter- and intra-tumor heterogeneity of apoptosis competency in colorectal cancer tissue at single-cell resolution
Lindner, Andreas Ulrich, Salvucci, Manuela, McDonough, Elizabeth, Cho, Sanghee, Stachtea, Xanthi, O'Connell, Emer P, Corwin, Alex D, Santamaria-Pang, Alberto, Carberry, Steven, Fichtner, Michael, Van Schaeybroeck, Sandra, Laurent-Puig, Pierre, Burke, John P, McNamara, Deborah A, Lawler, Mark, Sood, Anup, Graf, John F, Rehm, Markus, Dunne, Philip D, Longley, Daniel B, Ginty, Fiona, Prehn, Jochen H M
Published in Cell death and differentiation (01.04.2022)
Published in Cell death and differentiation (01.04.2022)
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Journal Article
Understanding heterogeneous tumor microenvironment in metastatic melanoma
Yan, Yiyi, Leontovich, Alexey A, Gerdes, Michael J, Desai, Keyur, Dong, Jinhong, Sood, Anup, Santamaria-Pang, Alberto, Mansfield, Aaron S, Chadwick, Chrystal, Zhang, Rong, Nevala, Wendy K, Flotte, Thomas J, Ginty, Fiona, Markovic, Svetomir N
Published in PloS one (05.06.2019)
Published in PloS one (05.06.2019)
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Multi-protein spatial signatures in ductal carcinoma in situ (DCIS) of breast
Badve, Sunil S, Cho, Sanghee, Gökmen-Polar, Yesim, Sui, Yunxia, Chadwick, Chrystal, McDonough, Elizabeth, Sood, Anup, Taylor, Marian, Zavodszky, Maria, Tan, Puay Hoon, Gerdes, Michael, Harris, Adrian L, Ginty, Fiona
Published in British journal of cancer (16.03.2021)
Published in British journal of cancer (16.03.2021)
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Stratification of chemotherapy-treated stage III colorectal cancer patients using multiplexed imaging and single-cell analysis of T-cell populations
Stachtea, Xanthi, Loughrey, Maurice B, Salvucci, Manuela, Lindner, Andreas U, Cho, Sanghee, McDonough, Elizabeth, Sood, Anup, Graf, John, Santamaria-Pang, Alberto, Corwin, Alex, Laurent-Puig, Pierre, Dasgupta, Sonali, Shia, Jinru, Owens, Jonathan R, Abate, Samantha, Van Schaeybroeck, Sandra, Lawler, Mark, Prehn, Jochen H M, Ginty, Fiona, Longley, Daniel B
Published in Modern pathology (01.04.2022)
Published in Modern pathology (01.04.2022)
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Efficacy and tolerability of anti-programmed death-ligand 1 (PD-L1) antibody (Avelumab) treatment in advanced thymoma
Rajan, Arun, Heery, Christopher R., Thomas, Anish, Mammen, Andrew L., Perry, Susan, O’Sullivan Coyne, Geraldine, Guha, Udayan, Berman, Arlene, Szabo, Eva, Madan, Ravi A., Ballester, Leomar Y., Pittaluga, Stefania, Donahue, Renee N., Tsai, Yo-Ting, Lepone, Lauren M., Chin, Kevin, Ginty, Fiona, Sood, Anup, Hewitt, Stephen M., Schlom, Jeffrey, Hassan, Raffit, Gulley, James L.
Published in Journal for immunotherapy of cancer (21.10.2019)
Published in Journal for immunotherapy of cancer (21.10.2019)
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Journal Article
Comparison of Multiplexed Immunofluorescence Imaging to Chromogenic Immunohistochemistry of Skin Biomarkers in Response to Monkeypox Virus Infection
Sood, Anup, Sui, Yunxia, McDonough, Elizabeth, Santamaría-Pang, Alberto, Al-Kofahi, Yousef, Pang, Zhengyu, Jahrling, Peter B, Kuhn, Jens H, Ginty, Fiona
Published in Viruses (23.07.2020)
Published in Viruses (23.07.2020)
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Journal Article
Multiscale, multimodal analysis of tumor heterogeneity in IDH1 mutant vs wild-type diffuse gliomas
Berens, Michael E, Sood, Anup, Barnholtz-Sloan, Jill S, Graf, John F, Cho, Sanghee, Kim, Seungchan, Kiefer, Jeffrey, Byron, Sara A, Halperin, Rebecca F, Nasser, Sara, Adkins, Jonathan, Cuyugan, Lori, Devine, Karen, Ostrom, Quinn, Couce, Marta, Wolansky, Leo, McDonough, Elizabeth, Schyberg, Shannon, Dinn, Sean, Sloan, Andrew E, Prados, Michael, Phillips, Joanna J, Nelson, Sarah J, Liang, Winnie S, Al-Kofahi, Yousef, Rusu, Mirabela, Zavodszky, Maria I, Ginty, Fiona
Published in PloS one (27.12.2019)
Published in PloS one (27.12.2019)
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3D reconstruction of skin and spatial mapping of immune cell density, vascular distance and effects of sun exposure and aging
Ghose, Soumya, Ju, Yingnan, McDonough, Elizabeth, Ho, Jonhan, Karunamurthy, Arivarasan, Chadwick, Chrystal, Cho, Sanghee, Rose, Rachel, Corwin, Alex, Surrette, Christine, Martinez, Jessica, Williams, Eric, Sood, Anup, Al-Kofahi, Yousef, Falo, Jr, Louis D, Börner, Katy, Ginty, Fiona
Published in Communications biology (19.07.2023)
Published in Communications biology (19.07.2023)
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Journal Article
Abstract 1448: Cell DIVE™: A robust and standardized platform for multiplexed whole slide imaging and single cell analysis
Corwin, Alex, McDonough, Elizabeth, Surrette, Christine, Dumpuri, Prashanth, Sood, Anup, Ginty, Fiona M.
Published in Cancer research (Chicago, Ill.) (15.08.2020)
Published in Cancer research (Chicago, Ill.) (15.08.2020)
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Journal Article
Boron-containing nucleic acids. 2. Synthesis of oligodeoxynucleoside boranophosphates
Sood, Anup, Shaw, Barbara Ramsay, Spielvogel, Bernard F
Published in Journal of the American Chemical Society (01.11.1990)
Published in Journal of the American Chemical Society (01.11.1990)
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Journal Article
In Situ Multiplex Immunofluorescence Analysis of Plasma Cell Myeloma Tissue Sections
Sood, Anup, Ginty, Fiona, Chadwick, Chrystal, Janz, Siegfried, Holman, Carol
Published in American journal of clinical pathology (21.09.2018)
Published in American journal of clinical pathology (21.09.2018)
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Journal Article
FLINO: a new method for immunofluorescence bioimage normalization
Graf, John, Cho, Sanghee, McDonough, Elizabeth, Corwin, Alex, Sood, Anup, Lindner, Andreas, Salvucci, Manuela, Stachtea, Xanthi, Van Schaeybroeck, Sandra, Dunne, Philip D, Laurent-Puig, Pierre, Longley, Daniel, Prehn, Jochen H M, Ginty, Fiona
Published in Bioinformatics (03.01.2022)
Published in Bioinformatics (03.01.2022)
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Journal Article
Abstract 2676: Hyperplexed immunofluorescence analysis (Cell DIVETM) of immune-related tumor heterogeneity in stage III colorectal cancer
Stachtea, Xanthi, Lindner, Andreas, Salvucci, Manuela, Cho, Sanghee, Sood, Anup, McDonough, Elizabeth, Santamaria-Pang, Alberto, Graf, John, Dunne, Philip, Lawler, Mark, Prehn, Jochen, Ginty, Fiona, Longley, Daniel
Published in Cancer research (Chicago, Ill.) (15.08.2020)
Published in Cancer research (Chicago, Ill.) (15.08.2020)
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Journal Article
FLINO -A new method for immunofluorescence bioimage normalization
Graf, John, Cho, Sanghee, Mcdonough, Elizabeth, Corwin, Alex, Sood, Anup, Lindner, Andreas, Salvucci, Manuela, Stachtea, Xanthi, van Schaeybroeck, Sandra, Dunne, Philip D, Laurent-Puig, Pierre, Longley, Daniel, Prehn, Jochen H M, Ginty, Fiona
Published in Bioinformatics (Oxford, England) (08.10.2021)
Published in Bioinformatics (Oxford, England) (08.10.2021)
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Journal Article
Abstract 547: Novel algorithms for spatial modeling of cellular interactions in the tumor microenvironment
Yan, Yiyi, Santamaria-Pang, Alberto, Gerdes, Michael, Ginty, Fiona, Sood, Anup, Markovic, Svetomir N., Leontovich, Alexey
Published in Cancer research (Chicago, Ill.) (01.07.2017)
Published in Cancer research (Chicago, Ill.) (01.07.2017)
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Journal Article
Abstract A039: Lower cellular activation of cMET signaling network is associated with reduced recurrence risk in stage II colorectal cancer
McDonough, Elizabeth, Sood, Anup, Ginty, Fiona, Cho, Sanghee, Graf, John, Prehn, Jochen, Dunne, Philip, Lindner, Andreas, Salvucci, Manuela, Longley, Daniel, Lawler, Mark, Hollmann, Travis, Shia, Jinru
Published in Molecular cancer therapeutics (01.12.2019)
Published in Molecular cancer therapeutics (01.12.2019)
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Journal Article
Novel DNA-based T-Cell Activator Promotes Rapid T-Cell Activation and Expansion
Keskar, Vandana, Sood, Anup, Loghin, Evelina, Kovacs, Ernest, Duthie, R Scott, Liu, Shutong, Park, Jee Hyun, Chadwick, Chrystal, Smith, Reginald, Brown, Martin, Stroncek, David F, Highfill, Steven L
Published in Journal of immunotherapy (1997) (01.10.2020)
Published in Journal of immunotherapy (1997) (01.10.2020)
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