Protax-fungi: a web-based tool for probabilistic taxonomic placement of fungal internal transcribed spacer sequences
Abarenkov, Kessy, Somervuo, Panu, Nilsson, R. Henrik, Kirk, Paul M., Huotari, Tea, Abrego, Nerea, Ovaskainen, Otso
Published in The New phytologist (01.10.2018)
Published in The New phytologist (01.10.2018)
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Journal Article
BARCOSEL: a tool for selecting an optimal barcode set for high-throughput sequencing
Somervuo, Panu, Koskinen, Patrik, Mei, Peng, Holm, Liisa, Auvinen, Petri, Paulin, Lars
Published in BMC bioinformatics (05.07.2018)
Published in BMC bioinformatics (05.07.2018)
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Journal Article
High resolution DNA barcode library for European butterflies reveals continental patterns of mitochondrial genetic diversity
Dincă, Vlad, Dapporto, Leonardo, Somervuo, Panu, Vodă, Raluca, Cuvelier, Sylvain, Gascoigne-Pees, Martin, Huemer, Peter, Mutanen, Marko, Hebert, Paul D. N., Vila, Roger
Published in Communications biology (09.03.2021)
Published in Communications biology (09.03.2021)
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Journal Article
A unified framework for analysis of individual-based models in ecology and beyond
Cornell, Stephen J., Suprunenko, Yevhen F., Finkelshtein, Dmitri, Somervuo, Panu, Ovaskainen, Otso
Published in Nature communications (17.10.2019)
Published in Nature communications (17.10.2019)
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Journal Article
Carrion fly‐derived DNA metabarcoding is an effective tool for mammal surveys: Evidence from a known tropical mammal community
Rodgers, Torrey W., Xu, Charles C. Y., Giacalone, Jacalyn, Kapheim, Karen M., Saltonstall, Kristin, Vargas, Marta, Yu, Douglas W., Somervuo, Panu, McMillan, W. Owen, Jansen, Patrick A.
Published in Molecular ecology resources (01.11.2017)
Published in Molecular ecology resources (01.11.2017)
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Journal Article
Significance of Heme-Based Respiration in Meat Spoilage Caused by Leuconostoc gasicomitatum
JÄÄSKELÄINEN, Elina, JOHANSSON, Per, KOSTIAINEN, Olli, NIEMINEN, Timo, SCHMIDT, Georg, SOMERVUO, Panu, MOHSINA, Marzia, VANNINEN, Paula, AUVINEN, Petri, BJÖRKROTH, Johanna
Published in Applied and Environmental Microbiology (01.02.2013)
Published in Applied and Environmental Microbiology (01.02.2013)
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Journal Article
MycoPins: a metabarcoding-based method to monitor fungal colonization of fine woody debris
Shumskaya, Maria, Lorusso, Nicholas, Patel, Urvi, Leigh, Madison, Somervuo, Panu, Schigel, Dmitry
Published in MycoKeys (Sofia, Bulgaria) (21.03.2023)
Published in MycoKeys (Sofia, Bulgaria) (21.03.2023)
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Journal Article
Transcriptomic analysis of (group I) Clostridium botulinum ATCC 3502 cold shock response
Dahlsten, Elias, Isokallio, Marita, Somervuo, Panu, Lindström, Miia, Korkeala, Hannu
Published in PloS one (24.02.2014)
Published in PloS one (24.02.2014)
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Journal Article
Transcriptomic and Phenotypic Analyses of the Sigma B-Dependent Characteristics and the Synergism between Sigma B and Sigma L in Listeria monocytogenes EGD-e
Mattila, Mirjami, Somervuo, Panu, Korkeala, Hannu, Stephan, Roger, Tasara, Taurai
Published in Microorganisms (Basel) (23.10.2020)
Published in Microorganisms (Basel) (23.10.2020)
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Journal Article
Higher host plant specialization of root‐associated endophytes than mycorrhizal fungi along an arctic elevational gradient
Abrego, Nerea, Huotari, Tea, Tack, Ayco J. M., Lindahl, Björn D., Tikhonov, Gleb, Somervuo, Panu, Martin Schmidt, Niels, Ovaskainen, Otso, Roslin, Tomas
Published in Ecology and evolution (01.08.2020)
Published in Ecology and evolution (01.08.2020)
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Journal Article
Preliminary study of ion mobility based electronic nose MGD-1 for discrimination of hard cheeses
Gursoy, Oguz, Somervuo, Panu, Alatossava, Tapani
Published in Journal of food engineering (01.05.2009)
Published in Journal of food engineering (01.05.2009)
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Journal Article
A Successful Crowdsourcing Approach for Bird Sound Classification
Lehikoinen, Petteri, Rannisto, Meeri, Camargo, Ulisses, Aintila, Aki, Lauha, Patrik, Piirainen, Esko, Somervuo, Panu, Ovaskainen, Otso
Published in Citizen science : theory and practice (11.04.2023)
Published in Citizen science : theory and practice (11.04.2023)
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Journal Article
Role and regulation of the Flp/Tad pilus in the virulence of Pectobacterium atrosepticum SCRI1043 and Pectobacterium wasabiae SCC3193
Nykyri, Johanna, Mattinen, Laura, Niemi, Outi, Adhikari, Satish, Kõiv, Viia, Somervuo, Panu, Fang, Xin, Auvinen, Petri, Mäe, Andres, Palva, E Tapio, Pirhonen, Minna
Published in PloS one (09.09.2013)
Published in PloS one (09.09.2013)
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Journal Article
Expression of signal transduction system encoding genes of Yersinia pseudotuberculosis IP32953 at 28°C and 3°C
Palonen, Eveliina, Lindström, Miia, Karttunen, Reija, Somervuo, Panu, Korkeala, Hannu
Published in PloS one (20.09.2011)
Published in PloS one (20.09.2011)
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Journal Article