HINGE: long-read assembly achieves optimal repeat resolution
Kamath, Govinda M, Shomorony, Ilan, Xia, Fei, Courtade, Thomas A, Tse, David N
Published in Genome research (01.05.2017)
Published in Genome research (01.05.2017)
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Journal Article
An unsupervised learning approach to identify novel signatures of health and disease from multimodal data
Shomorony, Ilan, Cirulli, Elizabeth T, Huang, Lei, Napier, Lori A, Heister, Robyn R, Hicks, Michael, Cohen, Isaac V, Yu, Hung-Chun, Swisher, Christine Leon, Schenker-Ahmed, Natalie M, Li, Weizhong, Nelson, Karen E, Brar, Pamila, Kahn, Andrew M, Spector, Timothy D, Caskey, C Thomas, Venter, J Craig, Karow, David S, Kirkness, Ewen F, Shah, Naisha
Published in Genome medicine (10.01.2020)
Published in Genome medicine (10.01.2020)
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Journal Article
Spectral Jaccard Similarity: A New Approach to Estimating Pairwise Sequence Alignments
Baharav, Tavor Z., Kamath, Govinda M., Tse, David N., Shomorony, Ilan
Published in Patterns (New York, N.Y.) (11.09.2020)
Published in Patterns (New York, N.Y.) (11.09.2020)
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Journal Article
DNA Merge-Sort: A Family of Nested Varshamov-Tenengolts Reassembly Codes for Out-of-Order Media
Nassirpour, Sajjad, Shomorony, Ilan, Vahid, Alireza
Published in IEEE transactions on communications (01.03.2024)
Published in IEEE transactions on communications (01.03.2024)
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Journal Article
LexicHash: sequence similarity estimation via lexicographic comparison of hashes
Greenberg, Grant, Ravi, Aditya Narayan, Shomorony, Ilan
Published in Bioinformatics (Oxford, England) (01.11.2023)
Published in Bioinformatics (Oxford, England) (01.11.2023)
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Journal Article
The Metagenomic Binning Problem: Clustering Markov Sequences
Greenberg, Grant, Shomorony, Ilan
Published in IEEE transactions on molecular, biological, and multi-scale communications (01.03.2024)
Published in IEEE transactions on molecular, biological, and multi-scale communications (01.03.2024)
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Journal Article
A cost-based analysis for risk-averse explore-then-commit finite-time bandits
Yekkehkhany, Ali, Arian, Ebrahim, Nagi, Rakesh, Shomorony, Ilan
Published in IIE transactions (03.10.2021)
Published in IIE transactions (03.10.2021)
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Journal Article
JIND: joint integration and discrimination for automated single-cell annotation
Goyal, Mohit, Serrano, Guillermo, Argemi, Josepmaria, Shomorony, Ilan, Hernaez, Mikel, Ochoa, Idoia
Published in Bioinformatics (Oxford, England) (28.04.2022)
Published in Bioinformatics (Oxford, England) (28.04.2022)
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Journal Article
Degrees of Freedom of Two-Hop Wireless Networks: Everyone Gets the Entire Cake
Shomorony, Ilan, Avestimehr, Amir Salman
Published in IEEE transactions on information theory (01.05.2014)
Published in IEEE transactions on information theory (01.05.2014)
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Journal Article
Coded Shotgun Sequencing
Ravi, Aditya Narayan, Vahid, Alireza, Shomorony, Ilan
Published in IEEE journal on selected areas in information theory (01.03.2022)
Published in IEEE journal on selected areas in information theory (01.03.2022)
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Journal Article
Capacity of the Erasure Shuffling Channel
Shin, Seiyun, Heckel, Reinhard, Shomorony, Ilan
Published in ICASSP 2020 - 2020 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP) (01.05.2020)
Published in ICASSP 2020 - 2020 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP) (01.05.2020)
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