In silico structure-based approaches to discover protein-protein interaction-targeting drugs
Shin, Woong-Hee, Christoffer, Charles W., Kihara, Daisuke
Published in Methods (San Diego, Calif.) (01.12.2017)
Published in Methods (San Diego, Calif.) (01.12.2017)
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Journal Article
Performance and enhancement of the LZerD protein assembly pipeline in CAPRI 38‐46
Christoffer, Charles, Terashi, Genki, Shin, Woong‐Hee, Aderinwale, Tunde, Maddhuri Venkata Subramaniya, Sai Raghavendra, Peterson, Lenna, Verburgt, Jacob, Kihara, Daisuke
Published in Proteins, structure, function, and bioinformatics (01.08.2020)
Published in Proteins, structure, function, and bioinformatics (01.08.2020)
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Journal Article
GalaxyDock2: Protein-ligand docking using beta-complex and global optimization
Shin, Woong-Hee, Kim, Jae-Kwan, Kim, Deok-Soo, Seok, Chaok
Published in Journal of computational chemistry (15.11.2013)
Published in Journal of computational chemistry (15.11.2013)
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Journal Article
S-Pred: protein structural property prediction using MSA transformer
Hong, Yiyu, Song, Jinung, Ko, Junsu, Lee, Juyong, Shin, Woong-Hee
Published in Scientific reports (16.08.2022)
Published in Scientific reports (16.08.2022)
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Journal Article
Three-dimensional compound comparison methods and their application in drug discovery
Shin, Woong-Hee, Zhu, Xiaolei, Bures, Mark Gregory, Kihara, Daisuke
Published in Molecules (Basel, Switzerland) (16.07.2015)
Published in Molecules (Basel, Switzerland) (16.07.2015)
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Journal Article
Human and server docking prediction for CAPRI round 30‐35 using LZerD with combined scoring functions
Peterson, Lenna X., Kim, Hyungrae, Esquivel‐Rodriguez, Juan, Roy, Amitava, Han, Xusi, Shin, Woong‐Hee, Zhang, Jian, Terashi, Genki, Lee, Matt, Kihara, Daisuke
Published in Proteins, structure, function, and bioinformatics (01.03.2017)
Published in Proteins, structure, function, and bioinformatics (01.03.2017)
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Journal Article
A remarkable genetic shift in a transmitted/founder virus broadens antibody responses against HIV-1
Jain, Swati, Uritskiy, Gherman, Mahalingam, Marthandan, Batra, Himanshu, Chand, Subhash, Trinh, Hung V, Beck, Charles, Shin, Woong-Hee, Alsalmi, Wadad, Kijak, Gustavo, Eller, Leigh A, Kim, Jerome, Kihara, Daisuke, Tovanabutra, Sodsai, Ferrari, Guido, Robb, Merlin L, Rao, Mangala, Rao, Venigalla B
Published in eLife (15.04.2024)
Published in eLife (15.04.2024)
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Journal Article
Exploring safe and potent bioactives for the treatment of non-small cell lung cancer
Thirunavukkarasu, Muthu Kumar, Shin, Woong-Hee, Karuppasamy, Ramanathan
Published in 3 Biotech (01.05.2021)
Published in 3 Biotech (01.05.2021)
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Journal Article
LigDockCSA: Protein-ligand docking using conformational space annealing
Shin, Woong-Hee, Heo, Lim, Lee, Juyong, Ko, Junsu, Seok, Chaok, Lee, Jooyoung
Published in Journal of computational chemistry (30.11.2011)
Published in Journal of computational chemistry (30.11.2011)
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Journal Article
Pannorin isolated from marine Penicillium sp. SG-W3: a selective monoamine oxidase A inhibitor
Oh, Jong Min, Gao, Qian, Shin, Woong-Hee, Lee, Eun-Young, Chung, Dawoon, Choi, Grace, Nam, Sang-Jip, Kim, Hoon
Published in Applied biological chemistry (01.03.2024)
Published in Applied biological chemistry (01.03.2024)
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Journal Article
Quantitative comparison of protein-protein interaction interface using physicochemical feature-based descriptors of surface patches
Shin, Woong-Hee, Kumazawa, Keiko, Imai, Kenichiro, Hirokawa, Takatsugu, Kihara, Daisuke
Published in Frontiers in molecular biosciences (06.02.2023)
Published in Frontiers in molecular biosciences (06.02.2023)
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Journal Article
An iterative compound screening contest method for identifying target protein inhibitors using the tyrosine-protein kinase Yes
Chiba, Shuntaro, Ishida, Takashi, Ikeda, Kazuyoshi, Mochizuki, Masahiro, Teramoto, Reiji, Taguchi, Y-h., Iwadate, Mitsuo, Umeyama, Hideaki, Ramakrishnan, Chandrasekaran, Thangakani, A. Mary, Velmurugan, D., Gromiha, M. Michael, Okuno, Tatsuya, Kato, Koya, Minami, Shintaro, Chikenji, George, Suzuki, Shogo D., Yanagisawa, Keisuke, Shin, Woong-Hee, Kihara, Daisuke, Yamamoto, Kazuki Z., Moriwaki, Yoshitaka, Yasuo, Nobuaki, Yoshino, Ryunosuke, Zozulya, Sergey, Borysko, Petro, Stavniichuk, Roman, Honma, Teruki, Hirokawa, Takatsugu, Akiyama, Yutaka, Sekijima, Masakazu
Published in Scientific reports (20.09.2017)
Published in Scientific reports (20.09.2017)
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Journal Article
GalaxySite: ligand-binding-site prediction by using molecular docking
Heo, Lim, Shin, Woong-Hee, Lee, Myeong Sup, Seok, Chaok
Published in Nucleic acids research (01.07.2014)
Published in Nucleic acids research (01.07.2014)
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Journal Article