A modification of the PHYLIP program: A solution for the redundant cluster problem, and an implementation of an automatic bootstrapping on trees inferred from original data
Shimada, Makoto K., Nishida, Tsunetoshi
Published in Molecular phylogenetics and evolution (01.04.2017)
Published in Molecular phylogenetics and evolution (01.04.2017)
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Journal Article
Distribution and effects of nonsense polymorphisms in human genes
Yamaguchi-Kabata, Yumi, Shimada, Makoto K, Hayakawa, Yosuke, Minoshima, Shinsei, Chakraborty, Ranajit, Gojobori, Takashi, Imanishi, Tadashi
Published in PloS one (14.10.2008)
Published in PloS one (14.10.2008)
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Journal Article
Prediction of protein-destabilizing polymorphisms by manual curation with protein structure
Gough, Craig Alan, Homma, Keiichi, Yamaguchi-Kabata, Yumi, Shimada, Makoto K, Chakraborty, Ranajit, Fujii, Yasuyuki, Iwama, Hisakazu, Minoshima, Shinsei, Sakamoto, Shigetaka, Sato, Yoshiharu, Suzuki, Yoshiyuki, Tada-Umezaki, Masahito, Nishikawa, Ken, Imanishi, Tadashi, Gojobori, Takashi
Published in PloS one (26.11.2012)
Published in PloS one (26.11.2012)
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Journal Article
A comprehensive survey of human polymorphisms at conserved splice dinucleotides and its evolutionary relationship with alternative splicing
Shimada, Makoto K, Hayakawa, Yosuke, Takeda, Jun-ichi, Gojobori, Takashi, Imanishi, Tadashi
Published in BMC evolutionary biology (30.04.2010)
Published in BMC evolutionary biology (30.04.2010)
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Journal Article
Allele Frequency Distribution of the Canine Dopamine Receptor D4 Gene Exon III and I in 23 Breeds
ITO, Hideyuki, NARA, Hidetoshi, INOUE-MURAYAMA, Miho, SHIMADA, Makoto K., KOSHIMURA, Akiko, UEDA, Yuko, KITAGAWA, Hitoshi, TAKEUCHI, Yukari, MORI, Yuji, MURAYAMA, Yuichi, MORITA, Mitsuo, IWASAKI, Toshiroh, ÔTA, Katuaki, TANABE, Yuichi, ITO, Shin'ichi
Published in Journal of Veterinary Medical Science (01.07.2004)
Published in Journal of Veterinary Medical Science (01.07.2004)
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Journal Article
3A-11 Evolutionary analysis on glutamine repeats using database integration between transcripts and polymorphism
SHIMADA Makoto K, SANBONMATSU Ryoko, YAMASAKI Chisato, YAMAGUCHI-KABATA Yumi, GOJOBORI Takashi, IMANISHI Tadashi
Published in Genes & Genetic Systems (01.12.2013)
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Published in Genes & Genetic Systems (01.12.2013)
Journal Article
Skewed Matrilineal Genetic Composition in a Small Wild Chimpanzee Community
Shimada, Makoto K, Hayakawa, Sachiko, Fujita, Shiho, Sugiyama, Yukimaru, Saitou, Naruya
Published in Folia primatologica (01.01.2009)
Published in Folia primatologica (01.01.2009)
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Journal Article
Mechanistic insights into human pre-mRNA splicing of human ultra-short introns: Potential unusual mechanism identifies G-rich introns
Sasaki-Haraguchi, Noriko, Shimada, Makoto K., Taniguchi, Ichiro, Ohno, Mutsuhito, Mayeda, Akila
Published in Biochemical and biophysical research communications (29.06.2012)
Published in Biochemical and biophysical research communications (29.06.2012)
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Journal Article
High Prevalence of Simian T-Lymphotropic Virus Type L in Wild Ethiopian Baboons
Takemura, Taichiro, Yamashita, Masahiro, Shimada, Makoto K, Ohkura, Sadayuki, Shotake, Takayoshi, Ikeda, Mikio, Miura, Tomoyuki, Hayami, Masanori
Published in Journal of Virology (01.02.2002)
Published in Journal of Virology (01.02.2002)
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Journal Article
Selection pressure on human STR loci and its relevance in repeat expansion disease
Shimada, Makoto K., Sanbonmatsu, Ryoko, Yamaguchi-Kabata, Yumi, Yamasaki, Chisato, Suzuki, Yoshiyuki, Chakraborty, Ranajit, Gojobori, Takashi, Imanishi, Tadashi
Published in Molecular genetics and genomics : MGG (01.10.2016)
Published in Molecular genetics and genomics : MGG (01.10.2016)
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Journal Article
VarySysDB: a human genetic polymorphism database based on all H-InvDB transcripts
Shimada, Makoto K, Matsumoto, Ryuzou, Hayakawa, Yosuke, Sanbonmatsu, Ryoko, Gough, Craig, Yamaguchi-Kabata, Yumi, Yamasaki, Chisato, Imanishi, Tadashi, Gojobori, Takashi
Published in Nucleic acids research (01.01.2009)
Published in Nucleic acids research (01.01.2009)
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Journal Article
Polymorphism in the second intron of dopamine receptor D4 gene in humans and apes
Shimada, Makoto K, Inoue-Murayama, Miho, Ueda, Yuko, Maejima, Masami, Murayama, Yuichi, Takenaka, Osamu, Hayasaka, Ikuo, Ito, Shin’ichi
Published in Biochemical and biophysical research communications (16.04.2004)
Published in Biochemical and biophysical research communications (16.04.2004)
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Journal Article