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Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context
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DNA Methylation, Isocitrate Dehydrogenase Mutation, and Survival in Glioma
CHRISTENSEN, Brock C, SMITH, Ashley A, KELSEY, Karl T, WIENCKE, John K, SHICHUN ZHENG, KOESTLER, Devin C, HOUSEMAN, E. Andres, MARSIT, Carmen J, WIEMELS, Joseph L, NELSON, Heather H, KARAGAS, Margaret R, WRENSCH, Margaret R
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A global DNA methylation and gene expression analysis of early human B-cell development reveals a demethylation signature and transcription factor network
Lee, Seung-Tae, Xiao, Yuanyuan, Muench, Marcus O, Xiao, Jianqiao, Fomin, Marina E, Wiencke, John K, Zheng, Shichun, Dou, Xiaoqin, de Smith, Adam, Chokkalingam, Anand, Buffler, Patricia, Ma, Xiaomei, Wiemels, Joseph L
Published in Nucleic acids research (01.12.2012)
Published in Nucleic acids research (01.12.2012)
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A low-frequency variant at 8q24.21 is strongly associated with risk of oligodendroglial tumors and astrocytomas with IDH1 or IDH2 mutation
Jenkins, Robert B, Xiao, Yuanyuan, Sicotte, Hugues, Decker, Paul A, Kollmeyer, Thomas M, Hansen, Helen M, Kosel, Matthew L, Zheng, Shichun, Walsh, Kyle M, Rice, Terri, Bracci, Paige, McCoy, Lucie S, Smirnov, Ivan, Patoka, Joseph S, Hsuang, George, Wiemels, Joe L, Tihan, Tarik, Pico, Alexander R, Prados, Michael D, Chang, Susan M, Berger, Mitchel S, Caron, Alissa A, Fink, Stephanie R, Halder, Chandralekha, Rynearson, Amanda L, Fridley, Brooke L, Buckner, Jan C, O'Neill, Brian P, Giannini, Caterina, Lachance, Daniel H, Wiencke, John K, Eckel-Passow, Jeanette E, Wrensch, Margaret R
Published in Nature genetics (01.10.2012)
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Direct and indirect targets of the E2A-PBX1 leukemia-specific fusion protein
Diakos, Christofer, Xiao, Yuanyuan, Zheng, Shichun, Kager, Leo, Dworzak, Michael, Wiemels, Joseph L
Published in PloS one (04.02.2014)
Published in PloS one (04.02.2014)
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Photoplethysmography based psychological stress detection with pulse rate variability feature differences and elastic net
Li, Fenghua, Xu, Peida, Zheng, Shichun, Chen, Wenfeng, Yan, Yang, Lu, Suo, Liu, Zhengkui
Published in International journal of distributed sensor networks (01.09.2018)
Published in International journal of distributed sensor networks (01.09.2018)
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Breast cancer DNA methylation profiles are associated with tumor size and alcohol and folate intake
Christensen, Brock C, Kelsey, Karl T, Zheng, Shichun, Houseman, E Andres, Marsit, Carmen J, Wrensch, Margaret R, Wiemels, Joseph L, Nelson, Heather H, Karagas, Margaret R, Kushi, Lawrence H, Kwan, Marilyn L, Wiencke, John K
Published in PLoS genetics (01.07.2010)
Published in PLoS genetics (01.07.2010)
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Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions
Houseman, E Andres, Christensen, Brock C, Yeh, Ru-Fang, Marsit, Carmen J, Karagas, Margaret R, Wrensch, Margaret, Nelson, Heather H, Wiemels, Joseph, Zheng, Shichun, Wiencke, John K, Kelsey, Karl T
Published in BMC bioinformatics (09.09.2008)
Published in BMC bioinformatics (09.09.2008)
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PTEN expression in non–small-cell lung cancer: evaluating its relation to tumor characteristics, allelic loss, and epigenetic alteration
Marsit, Carmen J., Zheng, Shichun, Aldape, Kenneth, Hinds, Philip W., Nelson, Heather H., Wiencke, John K., Kelsey, Karl T.
Published in Human pathology (01.07.2005)
Published in Human pathology (01.07.2005)
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Epigenetic Profiles Distinguish Pleural Mesothelioma from Normal Pleura and Predict Lung Asbestos Burden and Clinical Outcome
CHRISTENSEN, Brock C, HOUSEMAN, E. A, WIEMELS, Joe L, SHICHUN ZHENG, WIENCKE, John K, BUENO, Raphael, SUGARBAKER, David J, KELSEY, Karl T, GODLESKI, John J, MARSIT, Carmen J, LONGACKER, Jennifer L, ROELOFS, Cora R, KARAGAS, Margaret R, WRENSCH, Margaret R, YEH, Ru-Fang, NELSON, Heather H
Published in Cancer research (Chicago, Ill.) (01.01.2009)
Published in Cancer research (Chicago, Ill.) (01.01.2009)
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Identification of methylated genes associated with aggressive bladder cancer
Marsit, Carmen J, Houseman, E Andres, Christensen, Brock C, Gagne, Luc, Wrensch, Margaret R, Nelson, Heather H, Wiemels, Joseph, Zheng, Shichun, Wiencke, John K, Andrew, Angeline S, Schned, Alan R, Karagas, Margaret R, Kelsey, Karl T
Published in PloS one (23.08.2010)
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TEL-AML1 regulation of survivin and apoptosis via miRNA-494 and miRNA-320a
Diakos, Christofer, Zhong, Sheng, Xiao, Yuanyuan, Zhou, Mi, Vasconcelos, Gisele M., Krapf, Gerd, Yeh, Ru-Fang, Zheng, Shichun, Kang, Michelle, Wiencke, John K., Pombo-de-Oliveira, Maria S., Panzer-Grümayer, Renate, Wiemels, Joseph L.
Published in Blood (02.12.2010)
Published in Blood (02.12.2010)
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Epigenetic profiling reveals etiologically distinct patterns of DNA methylation in head and neck squamous cell carcinoma
Marsit, Carmen J., Christensen, Brock C., Houseman, E. Andres, Karagas, Margaret R., Wrensch, Margaret R., Yeh, Ru-Fang, Nelson, Heather H., Wiemels, Joseph L., Zheng, Shichun, Posner, Marshall R., McClean, Michael D., Wiencke, John K., Kelsey, Karl T.
Published in Carcinogenesis (New York) (01.03.2009)
Published in Carcinogenesis (New York) (01.03.2009)
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Methylation of the PTEN promoter defines low-grade gliomas and secondary glioblastoma
Wiencke, John K, Zheng, Shichun, Jelluma, Nanette, Tihan, Tarik, Vandenberg, Scott, Tamgüney, Tanja, Baumber, Rachel, Parsons, Ramon, Lamborn, Kathleen R, Berger, Mitchel S, Wrensch, Margaret R, Haas-Kogan, Daphne Adele, Stokoe, David
Published in Neuro-oncology (Charlottesville, Va.) (01.07.2007)
Published in Neuro-oncology (Charlottesville, Va.) (01.07.2007)
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Pathways Study: a prospective study of breast cancer survivorship within Kaiser Permanente Northern California
Kwan, Marilyn L, Ambrosone, Christine B, Lee, Marion M, Barlow, Janice, Krathwohl, Sarah E, Ergas, Isaac Joshua, Ashley, Christine H, Bittner, Julie R, Darbinian, Jeanne, Stronach, Keren, Caan, Bette J, Davis, Warren, Kutner, Susan E, Quesenberry, Charles P, Somkin, Carol P, Sternfeld, Barbara, Wiencke, John K, Zheng, Shichun, Kushi, Lawrence H
Published in Cancer causes & control (01.12.2008)
Published in Cancer causes & control (01.12.2008)
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Activation of PI3K/mTOR pathway occurs in most adult low-grade gliomas and predicts patient survival
McBride, Sean M., Perez, Daniel A., Polley, Mei-Yin, Vandenberg, Scott R., Smith, Justin S., Zheng, Shichun, Lamborn, Kathleen R., Wiencke, John K., Chang, Susan M., Prados, Michael D., Berger, Mitchel S., Stokoe, David, Haas-Kogan, Daphne A.
Published in Journal of neuro-oncology (01.03.2010)
Published in Journal of neuro-oncology (01.03.2010)
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Differentiation of Lung Adenocarcinoma, Pleural Mesothelioma, and Nonmalignant Pulmonary Tissues Using DNA Methylation Profiles
CHRISTENSEN, Brock C, MARSIT, Carmen J, BUENO, Raphael, SUGARBAKER, David J, NELSON, Heather H, WIENCKE, John K, KELSEY, Karl T, HOUSEMAN, E. Andres, GODLESKI, John J, LONGACKER, Jennifer L, SHICHUN ZHENG, YEH, Ru-Fang, WRENSCH, Margaret R, WIEMELS, Joseph L, KARAGAS, Margaret R
Published in Cancer research (Chicago, Ill.) (01.08.2009)
Published in Cancer research (Chicago, Ill.) (01.08.2009)
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