Scaffolding of long read assemblies using long range contact information
Ghurye, Jay, Pop, Mihai, Koren, Sergey, Bickhart, Derek, Chin, Chen-Shan
Published in BMC genomics (12.07.2017)
Published in BMC genomics (12.07.2017)
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Journal Article
The CBP/p300 histone acetyltransferases function as plant‐specific MEDIATOR subunits in Arabidopsis
Guo, Jing, Wei, Long, Chen, Shan‐Shan, Cai, Xue‐Wei, Su, Yin‐Na, Li, Lin, Chen, She, He, Xin‐Jian
Published in Journal of integrative plant biology (01.04.2021)
Published in Journal of integrative plant biology (01.04.2021)
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Small molecular fluorescent probes for the detection of lead, cadmium and mercury ions
Chen, Shan-Yong, Li, Zhi, Li, Kun, Yu, Xiao-Qi
Published in Coordination chemistry reviews (15.02.2021)
Published in Coordination chemistry reviews (15.02.2021)
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Journal Article
Therapeutic efficacy of the small molecule GS-5734 against Ebola virus in rhesus monkeys
Warren, Travis K., Jordan, Robert, Lo, Michael K., Ray, Adrian S., Mackman, Richard L., Soloveva, Veronica, Siegel, Dustin, Perron, Michel, Bannister, Roy, Hui, Hon C., Larson, Nate, Strickley, Robert, Wells, Jay, Stuthman, Kelly S., Van Tongeren, Sean A., Garza, Nicole L., Donnelly, Ginger, Shurtleff, Amy C., Retterer, Cary J., Gharaibeh, Dima, Zamani, Rouzbeh, Kenny, Tara, Eaton, Brett P., Grimes, Elizabeth, Welch, Lisa S., Gomba, Laura, Wilhelmsen, Catherine L., Nichols, Donald K., Nuss, Jonathan E., Nagle, Elyse R., Kugelman, Jeffrey R., Palacios, Gustavo, Doerffler, Edward, Neville, Sean, Carra, Ernest, Clarke, Michael O., Zhang, Lijun, Lew, Willard, Ross, Bruce, Wang, Queenie, Chun, Kwon, Wolfe, Lydia, Babusis, Darius, Park, Yeojin, Stray, Kirsten M., Trancheva, Iva, Feng, Joy Y., Barauskas, Ona, Xu, Yili, Wong, Pamela, Braun, Molly R., Flint, Mike, McMullan, Laura K., Chen, Shan-Shan, Fearns, Rachel, Swaminathan, Swami, Mayers, Douglas L., Spiropoulou, Christina F., Lee, William A., Nichol, Stuart T., Cihlar, Tomas, Bavari, Sina
Published in Nature (London) (17.03.2016)
Published in Nature (London) (17.03.2016)
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Journal Article
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
Chin, Chen-Shan, Alexander, David H, Marks, Patrick, Klammer, Aaron A, Drake, James, Heiner, Cheryl, Clum, Alicia, Copeland, Alex, Huddleston, John, Eichler, Evan E, Turner, Stephen W, Korlach, Jonas
Published in Nature methods (01.06.2013)
Published in Nature methods (01.06.2013)
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Journal Article
WRKY transcription factors and OBERON histone-binding proteins form complexes to balance plant growth and stress tolerance
Du, Ping, Wang, Qi, Yuan, Dan-Yang, Chen, Shan-Shan, Su, Yin-Na, Li, Lin, Chen, She, He, Xin-Jian
Published in The EMBO journal (04.10.2023)
Published in The EMBO journal (04.10.2023)
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Journal Article
C-H functionalization by high-valent CpCo(iii) catalysis
Wang, Shan, Chen, Shan-Yong, Yu, Xiao-Qi
Published in Chemical communications (Cambridge, England) (14.03.2017)
Published in Chemical communications (Cambridge, England) (14.03.2017)
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Journal Article
Enhancing the efficiency and stability of two-dimensional Dion-Jacobson perovskite solar cells using a fluorinated diammonium spacer
Wang, Di, Chen, Shan-Ci, Zheng, Qingdong
Published in Journal of materials chemistry. A, Materials for energy and sustainability (21.05.2021)
Published in Journal of materials chemistry. A, Materials for energy and sustainability (21.05.2021)
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Journal Article
The complete sequence of a human genome
Nurk, Sergey, Koren, Sergey, Rhie, Arang, Rautiainen, Mikko, Bzikadze, Andrey V, Mikheenko, Alla, Vollger, Mitchell R, Altemose, Nicolas, Uralsky, Lev, Gershman, Ariel, Aganezov, Sergey, Hoyt, Savannah J, Diekhans, Mark, Logsdon, Glennis A, Alonge, Michael, Antonarakis, Stylianos E, Borchers, Matthew, Bouffard, Gerard G, Brooks, Shelise Y, Caldas, Gina V, Chen, Nae-Chyun, Cheng, Haoyu, Chin, Chen-Shan, Chow, William, de Lima, Leonardo G, Dishuck, Philip C, Durbin, Richard, Dvorkina, Tatiana, Fiddes, Ian T, Formenti, Giulio, Fulton, Robert S, Fungtammasan, Arkarachai, Garrison, Erik, Grady, Patrick G S, Graves-Lindsay, Tina A, Hall, Ira M, Hansen, Nancy F, Hartley, Gabrielle A, Haukness, Marina, Howe, Kerstin, Hunkapiller, Michael W, Jain, Chirag, Jain, Miten, Jarvis, Erich D, Kerpedjiev, Peter, Kirsche, Melanie, Kolmogorov, Mikhail, Korlach, Jonas, Kremitzki, Milinn, Li, Heng, Maduro, Valerie V, Marschall, Tobias, McCartney, Ann M, McDaniel, Jennifer, Miller, Danny E, Mullikin, James C, Myers, Eugene W, Olson, Nathan D, Paten, Benedict, Peluso, Paul, Pevzner, Pavel A, Porubsky, David, Potapova, Tamara, Rogaev, Evgeny I, Rosenfeld, Jeffrey A, Salzberg, Steven L, Schneider, Valerie A, Sedlazeck, Fritz J, Shafin, Kishwar, Shew, Colin J, Shumate, Alaina, Sims, Ying, Smit, Arian F A, Soto, Daniela C, Sović, Ivan, Storer, Jessica M, Streets, Aaron, Sullivan, Beth A, Thibaud-Nissen, Françoise, Torrance, James, Wagner, Justin, Walenz, Brian P, Wenger, Aaron, Wood, Jonathan M D, Xiao, Chunlin, Yan, Stephanie M, Young, Alice C, Zarate, Samantha, Surti, Urvashi, McCoy, Rajiv C, Dennis, Megan Y, Alexandrov, Ivan A, Gerton, Jennifer L, O'Neill, Rachel J, Timp, Winston, Zook, Justin M, Schatz, Michael C, Eichler, Evan E, Miga, Karen H, Phillippy, Adam M
Published in Science (American Association for the Advancement of Science) (01.04.2022)
Published in Science (American Association for the Advancement of Science) (01.04.2022)
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Journal Article
Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome
Wenger, Aaron M., Peluso, Paul, Rowell, William J., Chang, Pi-Chuan, Hall, Richard J., Concepcion, Gregory T., Ebler, Jana, Fungtammasan, Arkarachai, Kolesnikov, Alexey, Olson, Nathan D., Töpfer, Armin, Alonge, Michael, Mahmoud, Medhat, Qian, Yufeng, Chin, Chen-Shan, Phillippy, Adam M., Schatz, Michael C., Myers, Gene, DePristo, Mark A., Ruan, Jue, Marschall, Tobias, Sedlazeck, Fritz J., Zook, Justin M., Li, Heng, Koren, Sergey, Carroll, Andrew, Rank, David R., Hunkapiller, Michael W.
Published in Nature biotechnology (01.10.2019)
Published in Nature biotechnology (01.10.2019)
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Journal Article
Assembling large genomes with single-molecule sequencing and locality-sensitive hashing
Berlin, Konstantin, Koren, Sergey, Chin, Chen-Shan, Drake, James P, Landolin, Jane M, Phillippy, Adam M
Published in Nature biotechnology (01.06.2015)
Published in Nature biotechnology (01.06.2015)
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Journal Article
Chromosome-scale, haplotype-resolved assembly of human genomes
Garg, Shilpa, Fungtammasan, Arkarachai, Carroll, Andrew, Chou, Mike, Schmitt, Anthony, Zhou, Xiang, Mac, Stephen, Peluso, Paul, Hatas, Emily, Ghurye, Jay, Maguire, Jared, Mahmoud, Medhat, Cheng, Haoyu, Heller, David, Zook, Justin M., Moemke, Tobias, Marschall, Tobias, Sedlazeck, Fritz J., Aach, John, Chin, Chen-Shan, Church, George M., Li, Heng
Published in Nature biotechnology (01.03.2021)
Published in Nature biotechnology (01.03.2021)
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