Integrative analysis of environmental sequences using MEGAN4
Huson, Daniel H, Mitra, Suparna, Ruscheweyh, Hans-Joachim, Weber, Nico, Schuster, Stephan C
Published in Genome research (01.09.2011)
Published in Genome research (01.09.2011)
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Journal Article
MEGAN analysis of metagenomic data
Huson, Daniel H, Auch, Alexander F, Qi, Ji, Schuster, Stephan C
Published in Genome Research (01.03.2007)
Published in Genome Research (01.03.2007)
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Journal Article
Multispecies diel transcriptional oscillations in open ocean heterotrophic bacterial assemblages
Ottesen, Elizabeth A., Young, Curtis R., Gifford, Scott M., Eppley, John M., Marin, Roman, Schuster, Stephan C., Scholin, Christopher A., DeLong, Edward F.
Published in Science (American Association for the Advancement of Science) (11.07.2014)
Published in Science (American Association for the Advancement of Science) (11.07.2014)
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Journal Article
Systematic evaluation of library preparation methods and sequencing platforms for high-throughput whole genome bisulfite sequencing
Zhou, Li, Ng, Hong Kiat, Drautz-Moses, Daniela I, Schuster, Stephan C, Beck, Stephan, Kim, Changhoon, Chambers, John Campbell, Loh, Marie
Published in Scientific reports (17.07.2019)
Published in Scientific reports (17.07.2019)
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Journal Article
Metagenomic profile of the bacterial communities associated with Ixodes ricinus ticks
Carpi, Giovanna, Cagnacci, Francesca, Wittekindt, Nicola E, Zhao, Fangqing, Qi, Ji, Tomsho, Lynn P, Drautz, Daniela I, Rizzoli, Annapaola, Schuster, Stephan C
Published in PloS one (13.10.2011)
Published in PloS one (13.10.2011)
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Journal Article
Comparison of sequencing platforms for single nucleotide variant calls in a human sample
Ratan, Aakrosh, Miller, Webb, Guillory, Joseph, Stinson, Jeremy, Seshagiri, Somasekar, Schuster, Stephan C
Published in PloS one (06.02.2013)
Published in PloS one (06.02.2013)
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Journal Article
Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment
Biddle, Jennifer F, Fitz-Gibbon, Sorel, Schuster, Stephan C, Brenchley, Jean E, House, Christopher H
Published in Proceedings of the National Academy of Sciences - PNAS (29.07.2008)
Published in Proceedings of the National Academy of Sciences - PNAS (29.07.2008)
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Journal Article
Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic
Lynch, Vincent J., Bedoya-Reina, Oscar C., Ratan, Aakrosh, Sulak, Michael, Drautz-Moses, Daniela I., Perry, George H., Miller, Webb, Schuster, Stephan C.
Published in Cell reports (Cambridge) (14.07.2015)
Published in Cell reports (Cambridge) (14.07.2015)
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Journal Article
A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome
Mavrich, Travis N, Ioshikhes, Ilya P, Venters, Bryan J, Jiang, Cizhong, Tomsho, Lynn P, Qi, Ji, Schuster, Stephan C, Albert, Istvan, Pugh, B Franklin
Published in Genome Research (01.07.2008)
Published in Genome Research (01.07.2008)
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Journal Article
Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome
Mavrich, Travis N, Qi, Ji, Albert, Istvan, Pugh, B. Franklin, Zanton, Sara J, Schuster, Stephan C, Tomsho, Lynn P
Published in Nature (29.03.2007)
Published in Nature (29.03.2007)
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Journal Article
Polar and brown bear genomes reveal ancient admixture and demographic footprints of past climate change
Miller, Webb, Schuster, Stephan C., Welch, Andreanna J., Ratan, Aakrosh, Bedoya-Reina, Oscar C., Zhao, Fangqing, Kim, Hie Lim, Burhans, Richard C., Drautz, Daniela I., Wittekindt, Nicola E., Tomsho, Lynn P., Ibarra-Laclette, Enrique, Herrera-Estrella, Luis, Peacock, Elizabeth, Farley, Sean, Sage, George K., Rode, Karyn, Obbard, Martyn, Montiel, Rafael, Bachmann, Lutz, Ingólfsson, Ólafur, Aars, Jon, Mailund, Thomas, Wiig, Øystein, Talbot, Sandra L., Lindqvist, Charlotte
Published in Proceedings of the National Academy of Sciences - PNAS (04.09.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (04.09.2012)
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Journal Article
Whole genome sequencing and analysis of plant growth promoting bacteria isolated from the rhizosphere of plantation crops coconut, cocoa and arecanut
Gupta, Alka, Gopal, Murali, Thomas, George V, Manikandan, Vinu, Gajewski, John, Thomas, George, Seshagiri, Somasekar, Schuster, Stephan C, Rajesh, Preeti, Gupta, Ravi
Published in PloS one (27.08.2014)
Published in PloS one (27.08.2014)
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Journal Article
Nucleosome organization in the Drosophila genome
Pugh, B. Franklin, Mavrich, Travis N, Jiang, Cizhong, Ioshikhes, Ilya P, Li, Xiaoyong, Venters, Bryan J, Zanton, Sara J, Tomsho, Lynn P, Qi, Ji, Glaser, Robert L, Schuster, Stephan C, Gilmour, David S, Albert, Istvan
Published in Nature (15.05.2008)
Published in Nature (15.05.2008)
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Journal Article
Long-read sequencing uncovers the adaptive topography of a carnivorous plant genome
Lan, Tianying, Renner, Tanya, Ibarra-Laclette, Enrique, Farr, Kimberly M., Chang, Tien-Hao, Cervantes-Pérez, Sergio Alan, Zheng, Chunfang, Sankoff, David, Tang, Haibao, Purbojati, Rikky W., Putra, Alexander, Drautz-Moses, Daniela I., Schuster, Stephan C., Herrera-Estrella, Luis, Albert, Victor A.
Published in Proceedings of the National Academy of Sciences - PNAS (30.05.2017)
Published in Proceedings of the National Academy of Sciences - PNAS (30.05.2017)
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Journal Article
The microbiomes of blowflies and houseflies as bacterial transmission reservoirs
Junqueira, Ana Carolina M, Ratan, Aakrosh, Acerbi, Enzo, Drautz-Moses, Daniela I, Premkrishnan, Balakrishnan N V, Costea, Paul I, Linz, Bodo, Purbojati, Rikky W, Paulo, Daniel F, Gaultier, Nicolas E, Subramanian, Poorani, Hasan, Nur A, Colwell, Rita R, Bork, Peer, Azeredo-Espin, Ana Maria L, Bryant, Donald A, Schuster, Stephan C
Published in Scientific reports (24.11.2017)
Published in Scientific reports (24.11.2017)
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Journal Article
Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling
Treusch, Alexander H., Leininger, Sven, Kletzin, Arnulf, Schuster, Stephan C., Klenk, Hans-Peter, Schleper, Christa
Published in Environmental microbiology (01.12.2005)
Published in Environmental microbiology (01.12.2005)
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Journal Article
Comparative genomics of the classical Bordetella subspecies: the evolution and exchange of virulence-associated diversity amongst closely related pathogens
Park, Jihye, Zhang, Ying, Buboltz, Anne M, Zhang, Xuqing, Schuster, Stephan C, Ahuja, Umesh, Liu, Minghsun, Miller, Jeff F, Sebaihia, Mohammed, Bentley, Stephen D, Parkhill, Julian, Harvill, Eric T
Published in BMC genomics (10.10.2012)
Published in BMC genomics (10.10.2012)
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Journal Article
Rapid diversification of coevolving marine Synechococcus and a virus
Marston, Marcia F, Pierciey, Francis J. Jr, Shepard, Alicia, Gearin, Gary, Qi, Ji, Yandava, Chandri, Schuster, Stephan C, Henn, Matthew R, Martiny, Jennifer B. H
Published in Proceedings of the National Academy of Sciences - PNAS (20.03.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (20.03.2012)
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