A pan-genomic approach to genome databases using maize as a model system
Woodhouse, Margaret R, Cannon, Ethalinda K, Portwood, John L, Harper, Lisa C, Gardiner, Jack M, Schaeffer, Mary L, Andorf, Carson M
Published in BMC plant biology (20.08.2021)
Published in BMC plant biology (20.08.2021)
Get full text
Journal Article
MaizeGDB 2018: the maize multi-genome genetics and genomics database
Portwood, John L, Woodhouse, Margaret R, Cannon, Ethalinda K, Gardiner, Jack M, Harper, Lisa C, Schaeffer, Mary L, Walsh, Jesse R, Sen, Taner Z, Cho, Kyoung Tak, Schott, David A, Braun, Bremen L, Dietze, Miranda, Dunfee, Brittney, Elsik, Christine G, Manchanda, Nancy, Coe, Ed, Sachs, Marty, Stinard, Philip, Tolbert, Josh, Zimmerman, Shane, Andorf, Carson M
Published in Nucleic acids research (08.01.2019)
Published in Nucleic acids research (08.01.2019)
Get full text
Journal Article
MaizeGDB update: new tools, data and interface for the maize model organism database
Andorf, Carson M, Cannon, Ethalinda K, Portwood, 2nd, John L, Gardiner, Jack M, Harper, Lisa C, Schaeffer, Mary L, Braun, Bremen L, Campbell, Darwin A, Vinnakota, Abhinav G, Sribalusu, Venktanaga V, Huerta, Miranda, Cho, Kyoung Tak, Wimalanathan, Kokulapalan, Richter, Jacqueline D, Mauch, Emily D, Rao, Bhavani S, Birkett, Scott M, Sen, Taner Z, Lawrence-Dill, Carolyn J
Published in Nucleic acids research (04.01.2016)
Published in Nucleic acids research (04.01.2016)
Get full text
Journal Article
Plant Structure Ontology, a Unified Vocabulary of Anatomy and Morphology of a Flowering Plant
Ilic, Katica, Kellogg, Elizabeth A, Jaiswal, Pankaj, Zapata, Felipe, Stevens, Peter F, Vincent, Leszek P, Avraham, Shulamit, Reiser, Leonore, Pujar, Anuradha, Sachs, Martin M, Whitman, Noah T, McCouch, Susan R, Schaeffer, Mary L, Ware, Doreen H, Stein, Lincoln D, Rhee, Seung Y
Published in Plant physiology (Bethesda) (01.02.2007)
Published in Plant physiology (Bethesda) (01.02.2007)
Get full text
Journal Article
A BAC pooling strategy combined with PCR-based screenings in a large, highly repetitive genome enables integration of the maize genetic and physical maps
Yim, Young-Sun, Moak, Patricia, Sanchez-Villeda, Hector, Musket, Theresa A, Close, Pamela, Klein, Patricia E, Mullet, John E, McMullen, Michael D, Fang, Zheiwei, Schaeffer, Mary L, Gardiner, Jack M, Coe, Jr, Edward H, Davis, Georgia L
Published in BMC genomics (09.02.2007)
Published in BMC genomics (09.02.2007)
Get full text
Journal Article
POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data
Antonescu, Valentin, Yilmaz, Alper, Jennewein, Douglas M., Kodavali, Sateesh, Braun, Bremen L., Birkett, Scott M., Cannon, Ethalinda K. S., Antonescu, Corina, Harper, Lisa C., Gardiner, Jack M., Schaeffer, Mary L., Campbell, Darwin A., Andorf, Carson M., Andorf, Destri, Lisch, Damon, Koch, Karen E., McCarty, Donald R., Quackenbush, John, Grotewold, Erich, Lushbough, Carol M., Sen, Taner Z., Lawrence, Carolyn J.
Published in International Journal of Plant Genomics (2011)
Published in International Journal of Plant Genomics (2011)
Get full text
Journal Article
The Locus Lookup tool at MaizeGDB: identification of genomic regions in maize by integrating sequence information with physical and genetic maps
Andorf, Carson M., Lawrence, Carolyn J., Harper, Lisa C., Schaeffer, Mary L., Campbell, Darwin A., Sen, Taner Z.
Published in Bioinformatics (01.02.2010)
Published in Bioinformatics (01.02.2010)
Get full text
Journal Article
MaizeGDB: curation and outreach go hand-in-hand
Schaeffer, Mary L, Harper, Lisa C, Gardiner, Jack M, Andorf, Carson M, Campbell, Darwin A, Cannon, Ethalinda K S, Sen, Taner Z, Lawrence, Carolyn J
Published in Database : the journal of biological databases and curation (01.01.2011)
Published in Database : the journal of biological databases and curation (01.01.2011)
Get full text
Journal Article
BC4GO: a full-text corpus for the BioCreative IV GO task
Van Auken, Kimberly, Schaeffer, Mary L, McQuilton, Peter, Laulederkind, Stanley J F, Li, Donghui, Wang, Shur-Jen, Hayman, G Thomas, Tweedie, Susan, Arighi, Cecilia N, Done, James, Müller, Hans-Michael, Sternberg, Paul W, Mao, Yuqing, Wei, Chih-Hsuan, Lu, Zhiyong
Published in Database : the journal of biological databases and curation (2014)
Published in Database : the journal of biological databases and curation (2014)
Get full text
Journal Article
MaizeGDB's new data types, resources and activities
Lawrence, Carolyn J, Schaeffer, Mary L, Seigfried, Trent E, Campbell, Darwin A, Harper, Lisa C
Published in Nucleic acids research (01.01.2007)
Published in Nucleic acids research (01.01.2007)
Get full text
Journal Article
An overview of the BioCreative 2012 Workshop Track III: interactive text mining task
Arighi, Cecilia N, Carterette, Ben, Cohen, K Bretonnel, Krallinger, Martin, Wilbur, W John, Fey, Petra, Dodson, Robert, Cooper, Laurel, Van Slyke, Ceri E, Dahdul, Wasila, Mabee, Paula, Li, Donghui, Harris, Bethany, Gillespie, Marc, Jimenez, Silvia, Roberts, Phoebe, Matthews, Lisa, Becker, Kevin, Drabkin, Harold, Bello, Susan, Licata, Luana, Chatr-aryamontri, Andrew, Schaeffer, Mary L, Park, Julie, Haendel, Melissa, Van Auken, Kimberly, Li, Yuling, Chan, Juancarlos, Muller, Hans-Michael, Cui, Hong, Balhoff, James P, Chi-Yang Wu, Johnny, Lu, Zhiyong, Wei, Chih-Hsuan, Tudor, Catalina O, Raja, Kalpana, Subramani, Suresh, Natarajan, Jeyakumar, Cejuela, Juan Miguel, Dubey, Pratibha, Wu, Cathy
Published in Database : the journal of biological databases and curation (2013)
Published in Database : the journal of biological databases and curation (2013)
Get full text
Journal Article
Surveying the Maize community for their diversity and pedigree visualization needs to prioritize tool development and curation
Sen, Taner Z., Braun, Bremen L., Schott, David A., Portwood, II, John L., Schaeffer, Mary L., Harper, Lisa C., Gardiner, Jack M., Cannon, Ethalinda K., Andorf, Carson M.
Published in Database : the journal of biological databases and curation (2017)
Published in Database : the journal of biological databases and curation (2017)
Get full text
Journal Article
Overview of the gene ontology task at BioCreative IV
Mao, Yuqing, Van Auken, Kimberly, Li, Donghui, Arighi, Cecilia N, McQuilton, Peter, Hayman, G Thomas, Tweedie, Susan, Schaeffer, Mary L, Laulederkind, Stanley J F, Wang, Shur-Jen, Gobeill, Julien, Ruch, Patrick, Luu, Anh Tuan, Kim, Jung-Jae, Chiang, Jung-Hsien, Chen, Yu-De, Yang, Chia-Jung, Liu, Hongfang, Zhu, Dongqing, Li, Yanpeng, Yu, Hong, Emadzadeh, Ehsan, Gonzalez, Graciela, Chen, Jian-Ming, Dai, Hong-Jie, Lu, Zhiyong
Published in Database : the journal of biological databases and curation (2014)
Published in Database : the journal of biological databases and curation (2014)
Get full text
Journal Article
Choosing a genome browser for a Model Organism Database: surveying the maize community
Sen, Taner Z, Harper, Lisa C, Schaeffer, Mary L, Andorf, Carson M, Seigfried, Trent E, Campbell, Darwin A, Lawrence, Carolyn J
Published in Database : the journal of biological databases and curation (01.01.2010)
Published in Database : the journal of biological databases and curation (01.01.2010)
Get full text
Journal Article
MaizeGDB becomes 'sequence-centric'
Sen, Taner Z, Andorf, Carson M, Schaeffer, Mary L, Harper, Lisa C, Sparks, Michael E, Duvick, Jon, Brendel, Volker P, Cannon, Ethalinda, Campbell, Darwin A, Lawrence, Carolyn J
Published in Database : the journal of biological databases and curation (01.01.2009)
Published in Database : the journal of biological databases and curation (01.01.2009)
Get full text
Journal Article
The MaizeGDB Genome Browser tutorial: one example of database outreach to biologists via video
Harper, Lisa C, Schaeffer, Mary L, Thistle, Jordan, Gardiner, Jack M, Andorf, Carson M, Campbell, Darwin A, Cannon, Ethalinda K S, Braun, Bremen L, Birkett, Scott M, Lawrence, Carolyn J, Sen, Taner Z
Published in Database : the journal of biological databases and curation (01.01.2011)
Published in Database : the journal of biological databases and curation (01.01.2011)
Get full text
Journal Article
The plant structure ontology, a unified vocabulary of anatomy and morphology of a flowering plant1[W][OA]
ILIC, Katica, KELLOGG, Elizabeth A, WHITMAN, Noah T, MCCOUCH, Susan R, SCHAEFFER, Mary L, WARE, Doreen H, STEIN, Lincoln D, RHEE, Seung Y, JAISWAL, Pankaj, ZAPATA, Felipe, STEVENS, Peter F, VINCENT, Leszek P, AVRAHAM, Shulamit, REISER, Leonore, PUJAR, Anuradha, SACHS, Martin M
Published in Plant physiology (Bethesda) (01.02.2007)
Published in Plant physiology (Bethesda) (01.02.2007)
Get full text
Journal Article