De novo design of tunable, pH-driven conformational changes
Boyken, Scott E, Benhaim, Mark A, Busch, Florian, Jia, Mengxuan, Bick, Matthew J, Choi, Heejun, Klima, Jason C, Chen, Zibo, Walkey, Carl, Mileant, Alexander, Sahasrabuddhe, Aniruddha, Wei, Kathy Y, Hodge, Edgar A, Byron, Sarah, Quijano-Rubio, Alfredo, Sankaran, Banumathi, King, Neil P, Lippincott-Schwartz, Jennifer, Wysocki, Vicki H, Lee, Kelly K, Baker, David
Published in Science (American Association for the Advancement of Science) (17.05.2019)
Published in Science (American Association for the Advancement of Science) (17.05.2019)
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Journal Article
Minimally disruptive optical control of protein tyrosine phosphatase 1B
Hongdusit, Akarawin, Zwart, Peter H, Sankaran, Banumathi, Fox, Jerome M
Published in Nature communications (07.02.2020)
Published in Nature communications (07.02.2020)
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Journal Article
A conserved PLPLRT/SD motif of STING mediates the recruitment and activation of TBK1
Zhao, Baoyu, Du, Fenglei, Xu, Pengbiao, Shu, Chang, Sankaran, Banumathi, Bell, Samantha L, Liu, Mengmeng, Lei, Yuanjiu, Gao, Xinsheng, Fu, Xiaofeng, Zhu, Fanxiu, Liu, Yang, Laganowsky, Arthur, Zheng, Xueyun, Ji, Jun-Yuan, West, A Phillip, Watson, Robert O, Li, Pingwei
Published in Nature (London) (01.05.2019)
Published in Nature (London) (01.05.2019)
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Journal Article
Liquid condensation of reprogramming factor KLF4 with DNA provides a mechanism for chromatin organization
Sharma, Rajesh, Choi, Kyoung-Jae, Quan, My Diem, Sharma, Sonum, Sankaran, Banumathi, Park, Hyekyung, LaGrone, Anel, Kim, Jean J, MacKenzie, Kevin R, Ferreon, Allan Chris M, Kim, Choel, Ferreon, Josephine C
Published in Nature communications (22.09.2021)
Published in Nature communications (22.09.2021)
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Journal Article
Broadly cross-reactive human antibodies that inhibit genogroup I and II noroviruses
Alvarado, Gabriela, Salmen, Wilhelm, Ettayebi, Khalil, Hu, Liya, Sankaran, Banumathi, Estes, Mary K, Venkataram Prasad, B V, Crowe, Jr, James E
Published in Nature communications (14.07.2021)
Published in Nature communications (14.07.2021)
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Journal Article
Tailored design of protein nanoparticle scaffolds for multivalent presentation of viral glycoprotein antigens
Ueda, George, Antanasijevic, Aleksandar, Fallas, Jorge A, Sheffler, William, Copps, Jeffrey, Ellis, Daniel, Hutchinson, Geoffrey B, Moyer, Adam, Yasmeen, Anila, Tsybovsky, Yaroslav, Park, Young-Jun, Bick, Matthew J, Sankaran, Banumathi, Gillespie, Rebecca A, Brouwer, Philip Jm, Zwart, Peter H, Veesler, David, Kanekiyo, Masaru, Graham, Barney S, Sanders, Rogier W, Moore, John P, Klasse, Per Johan, Ward, Andrew B, King, Neil P, Baker, David
Published in eLife (04.08.2020)
Published in eLife (04.08.2020)
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Journal Article
Structure and function of the Zika virus full-length NS5 protein
Zhao, Baoyu, Yi, Guanghui, Du, Fenglei, Chuang, Yin-Chih, Vaughan, Robert C, Sankaran, Banumathi, Kao, C Cheng, Li, Pingwei
Published in Nature communications (27.03.2017)
Published in Nature communications (27.03.2017)
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Journal Article
Glycan recognition in globally dominant human rotaviruses
Hu, Liya, Sankaran, Banumathi, Laucirica, Daniel R, Patil, Ketki, Salmen, Wilhelm, Ferreon, Allan Chris M, Tsoi, Phoebe S, Lasanajak, Yi, Smith, David F, Ramani, Sasirekha, Atmar, Robert L, Estes, Mary K, Ferreon, Josephine C, Prasad, B V Venkataram
Published in Nature communications (06.07.2018)
Published in Nature communications (06.07.2018)
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Journal Article
Structural basis of the stereoselective formation of the spirooxindole ring in the biosynthesis of citrinadins
Liu, Zhiwen, Zhao, Fanglong, Zhao, Boyang, Yang, Jie, Ferrara, Joseph, Sankaran, Banumathi, Venkataram Prasad, B. V., Kundu, Biki Bapi, Phillips, George N., Gao, Yang, Hu, Liya, Zhu, Tong, Gao, Xue
Published in Nature communications (06.07.2021)
Published in Nature communications (06.07.2021)
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Journal Article
De novo design of protein homo-oligomers with modular hydrogen-bond network–mediated specificity
Boyken, Scott E., Chen, Zibo, Groves, Benjamin, Langan, Robert A., Oberdorfer, Gustav, Ford, Alex, Gilmore, Jason M., Xu, Chunfu, DiMaio, Frank, Pereira, Jose Henrique, Sankaran, Banumathi, Seelig, Georg, Zwart, Peter H., Baker, David
Published in Science (American Association for the Advancement of Science) (06.05.2016)
Published in Science (American Association for the Advancement of Science) (06.05.2016)
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Journal Article
Structural basis for concerted recruitment and activation of IRF-3 by innate immune adaptor proteins
Zhao, Baoyu, Shu, Chang, Gao, Xinsheng, Sankaran, Banumathi, Du, Fenglei, Shelton, Catherine L., Herr, Andrew B., Ji, Jun-Yuan, Li, Pingwei
Published in Proceedings of the National Academy of Sciences - PNAS (14.06.2016)
Published in Proceedings of the National Academy of Sciences - PNAS (14.06.2016)
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Journal Article
Computational design of environmental sensors for the potent opioid fentanyl
Bick, Matthew J, Greisen, Per J, Morey, Kevin J, Antunes, Mauricio S, La, David, Sankaran, Banumathi, Reymond, Luc, Johnsson, Kai, Medford, June I, Baker, David
Published in eLife (19.09.2017)
Published in eLife (19.09.2017)
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Journal Article
Computational design of self-assembling cyclic protein homo-oligomers
Fallas, Jorge A, Ueda, George, Sheffler, William, Nguyen, Vanessa, McNamara, Dan E, Sankaran, Banumathi, Pereira, Jose Henrique, Parmeggiani, Fabio, Brunette, T J, Cascio, Duilio, Yeates, Todd R, Zwart, Peter, Baker, David
Published in Nature chemistry (01.04.2017)
Published in Nature chemistry (01.04.2017)
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Journal Article
Functional and structural characterization of AntR, an Sb(III) responsive transcriptional repressor
Viswanathan, Thiruselvam, Chen, Jian, Wu, Minghan, An, Lijin, Kandavelu, Palani, Sankaran, Banumathi, Radhakrishnan, Manohar, Li, Mingshun, Rosen, Barry P.
Published in Molecular microbiology (01.08.2021)
Published in Molecular microbiology (01.08.2021)
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Journal Article
Author Correction: Broadly cross-reactive human antibodies that inhibit genogroup I and II noroviruses
Alvarado, Gabriela, Salmen, Wilhelm, Ettayebi, Khalil, Hu, Liya, Sankaran, Banumathi, Estes, Mary K., Venkataram Prasad, B. V., Crowe, James E.
Published in Nature communications (14.10.2021)
Published in Nature communications (14.10.2021)
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Journal Article
Phosphorylation cascade regulates the formation and maturation of rotaviral replication factories
Criglar, Jeanette M., Anish, Ramakrishnan, Hu, Liya, Crawford, Sue E., Sankaran, Banumathi, Prasad, B. V. Venkataram, Estes, Mary K.
Published in Proceedings of the National Academy of Sciences - PNAS (18.12.2018)
Published in Proceedings of the National Academy of Sciences - PNAS (18.12.2018)
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Journal Article
Discovery of small molecules targeting the tandem tudor domain of the epigenetic factor UHRF1 using fragment-based ligand discovery
Chang, Lyra, Campbell, James, Raji, Idris O, Guduru, Shiva K R, Kandel, Prasanna, Nguyen, Michelle, Liu, Steven, Tran, Kevin, Venugopal, Navneet K, Taylor, Bethany C, Holt, Matthew V, Young, Nicolas L, Samuel, Errol L G, Jain, Prashi, Santini, Conrad, Sankaran, Banumathi, MacKenzie, Kevin R, Young, Damian W
Published in Scientific reports (13.01.2021)
Published in Scientific reports (13.01.2021)
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Journal Article
Sculpting conducting nanopore size and shape through de novo protein design
Berhanu, Samuel, Majumder, Sagardip, Müntener, Thomas, Whitehouse, James, Berner, Carolin, Bera, Asim K, Kang, Alex, Liang, Binyong, Khan, Nasir, Sankaran, Banumathi, Tamm, Lukas K, Brockwell, David J, Hiller, Sebastian, Radford, Sheena E, Baker, David, Vorobieva, Anastassia A
Published in Science (American Association for the Advancement of Science) (19.07.2024)
Published in Science (American Association for the Advancement of Science) (19.07.2024)
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Journal Article
Structure of orthoreovirus RNA chaperone σNS, a component of viral replication factories
Zhao, Boyang, Hu, Liya, Kaundal, Soni, Neetu, Neetu, Lee, Christopher H, Somoulay, Xayathed, Sankaran, Banumathi, Taylor, Gwen M, Dermody, Terence S, Venkataram Prasad, B V
Published in Nature communications (19.03.2024)
Published in Nature communications (19.03.2024)
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