Neuronal subtypes and diversity revealed by single-nucleus RNA sequencing of the human brain
Lake, Blue B., Ai, Rizi, Kaeser, Gwendolyn E., Salathia, Neeraj S., Yung, Yun C., Liu, Rui, Wildberg, Andre, Gao, Derek, Fung, Ho-Lim, Chen, Song, Vijayaraghavan, Raakhee, Wong, Julian, Chen, Allison, Sheng, Xiaoyan, Kaper, Fiona, Shen, Richard, Ronaghi, Mostafa, Fan, Jian-Bing, Wang, Wei, Chun, Jerold, Zhang, Kun
Published in Science (American Association for the Advancement of Science) (24.06.2016)
Published in Science (American Association for the Advancement of Science) (24.06.2016)
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Journal Article
Characterizing transcriptional heterogeneity through pathway and gene set overdispersion analysis
Fan, Jean, Salathia, Neeraj, Liu, Rui, Kaeser, Gwendolyn E, Yung, Yun C, Herman, Joseph L, Kaper, Fiona, Fan, Jian-Bing, Zhang, Kun, Chun, Jerold, Kharchenko, Peter V
Published in Nature methods (01.03.2016)
Published in Nature methods (01.03.2016)
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Journal Article
Non-invasive characterization of human bone marrow stimulation and reconstitution by cell-free messenger RNA sequencing
Ibarra, Arkaitz, Zhuang, Jiali, Zhao, Yue, Salathia, Neeraj S., Huang, Vera, Acosta, Alexander D., Aballi, Jonathan, Toden, Shusuke, Karns, Amy P., Purnajo, Intan, Parks, Julianna R., Guo, Lucy, Mason, James, Sigal, Darren, Nova, Tina S., Quake, Stephen R., Nerenberg, Michael
Published in Nature communications (21.01.2020)
Published in Nature communications (21.01.2020)
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Journal Article
Plant Circadian Clocks Increase Photosynthesis, Growth, Survival, and Competitive Advantage
Dodd, Antony N, Salathia, Neeraj, Hall, Anthony, Kévei, Eva, Tóth, Réka, Nagy, Ferenc, Hibberd, Julian M, Millar, Andrew J, Webb, Alex A. R
Published in Science (American Association for the Advancement of Science) (22.07.2005)
Published in Science (American Association for the Advancement of Science) (22.07.2005)
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Journal Article
Development and Validation of an Ultradeep Next-Generation Sequencing Assay for Testing of Plasma Cell-Free DNA from Patients with Advanced Cancer
Janku, Filip, Zhang, Shile, Waters, Jill, Liu, Li, Huang, Helen J, Subbiah, Vivek, Hong, David S, Karp, Daniel D, Fu, Siqing, Cai, Xuyu, Ramzanali, Nishma M, Madwani, Kiran, Cabrilo, Goran, Andrews, Debra L, Zhao, Yue, Javle, Milind, Kopetz, E Scott, Luthra, Rajyalakshmi, Kim, Hyunsung J, Gnerre, Sante, Satya, Ravi Vijaya, Chuang, Han-Yu, Kruglyak, Kristina M, Toung, Jonathan, Zhao, Chen, Shen, Richard, Heymach, John V, Meric-Bernstam, Funda, Mills, Gordon B, Fan, Jian-Bing, Salathia, Neeraj S
Published in Clinical cancer research (15.09.2017)
Published in Clinical cancer research (15.09.2017)
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Journal Article
HSP90 affects the expression of genetic variation and developmental stability in quantitative traits
Sangster, Todd A, Salathia, Neeraj, Undurraga, Soledad, Milo, Ron, Schellenberg, Kurt, Lindquist, Susan, Queitsch, Christine
Published in Proceedings of the National Academy of Sciences - PNAS (26.02.2008)
Published in Proceedings of the National Academy of Sciences - PNAS (26.02.2008)
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Journal Article
Noninvasive characterization of Alzheimer's disease by circulating, cell-free messenger RNA next-generation sequencing
Toden, Shusuke, Zhuang, Jiali, Acosta, Alexander D, Karns, Amy P, Salathia, Neeraj S, Brewer, James B, Wilcock, Donna M, Aballi, Jonathan, Nerenberg, Mike, Quake, Stephen R, Ibarra, Arkaitz
Published in Science advances (01.12.2020)
Published in Science advances (01.12.2020)
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Journal Article
FLOWERING LOCUS C Mediates Natural Variation in the High-Temperature Response of the Arabidopsis Circadian Clock
Edwards, Kieron D, Anderson, Paul E, Hall, Anthony, Salathia, Neeraj S, Locke, James C.W, Lynn, James R, Straume, Martin, Smith, James Q, Millar, Andrew J
Published in The Plant cell (01.03.2006)
Published in The Plant cell (01.03.2006)
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Journal Article
HSP90-buffered genetic variation is common in Arabidopsis thaliana
Sangster, Todd A, Salathia, Neeraj, Lee, Hana N, Watanabe, Etsuko, Schellenberg, Kurt, Morneau, Keith, Wang, Hui, Undurraga, Soledad, Queitsch, Christine, Lindquist, Susan
Published in Proceedings of the National Academy of Sciences - PNAS (26.02.2008)
Published in Proceedings of the National Academy of Sciences - PNAS (26.02.2008)
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Journal Article
Feasibility of monitoring advanced melanoma patients using cell‐free DNA from plasma
Gangadhar, Tara C., Savitch, Samantha L., Yee, Stephanie S., Xu, Wei, Huang, Alexander C., Harmon, Shannon, Lieberman, David B., Soucier, Devon, Fan, Ryan, Black, Taylor A., Morrissette, Jennifer J. D., Salathia, Neeraj, Waters, Jill, Zhang, Shile, Toung, Jonathan, Hummelen, Paul, Fan, Jian‐Bing, Xu, Xiaowei, Amaravadi, Ravi K., Schuchter, Lynn M., Karakousis, Giorgos C., Hwang, Wei‐Ting, Carpenter, Erica L.
Published in Pigment cell and melanoma research (01.01.2018)
Published in Pigment cell and melanoma research (01.01.2018)
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Journal Article
Genetic suppression reveals DNA repair-independent antagonism between BRCA1 and COBRA1 in mammary gland development
Nair, Sreejith J., Zhang, Xiaowen, Chiang, Huai-Chin, Jahid, Md Jamiul, Wang, Yao, Garza, Paula, April, Craig, Salathia, Neeraj, Banerjee, Tapahsama, Alenazi, Fahad S., Ruan, Jianhua, Fan, Jian-Bing, Parvin, Jeffrey D., Jin, Victor X., Hu, Yanfen, Li, Rong
Published in Nature communications (04.03.2016)
Published in Nature communications (04.03.2016)
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Journal Article
Detection and resolution of genetic loci affecting circadian period in Brassica oleracea
Salathia, Neeraj, Lynn, James R, Millar, Andrew J, King, Graham J
Published in Theoretical and applied genetics (01.02.2007)
Published in Theoretical and applied genetics (01.02.2007)
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Journal Article
FLOWERING LOCUS C-dependent and -independent regulation of the circadian clock by the autonomous and vernalization pathways
Salathia, Neeraj, Davis, Seth J, Lynn, James R, Michaels, Scott D, Amasino, Richard M, Millar, Andrew J
Published in BMC plant biology (31.05.2006)
Published in BMC plant biology (31.05.2006)
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Journal Article
TECHNICAL ADVANCE: Indel arrays: an affordable alternative for genotyping
Salathia, Neeraj, Lee, Hana N., Sangster, Todd A., Morneau, Keith, Landry, Christian R., Schellenberg, Kurt, Behere, Aditi S., Gunderson, Kevin L., Cavalieri, Duccio, Jander, Georg, Queitsch, Christine
Published in The Plant journal : for cell and molecular biology (01.08.2007)
Published in The Plant journal : for cell and molecular biology (01.08.2007)
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Journal Article
Assessing characteristics of RNA amplification methods for single cell RNA sequencing
Dueck, Hannah R, Ai, Rizi, Camarena, Adrian, Ding, Bo, Dominguez, Reymundo, Evgrafov, Oleg V, Fan, Jian-Bing, Fisher, Stephen A, Herstein, Jennifer S, Kim, Tae Kyung, Kim, Jae Mun Hugo, Lin, Ming-Yi, Liu, Rui, Mack, William J, McGroty, Sean, Nguyen, Joseph D, Salathia, Neeraj, Shallcross, Jamie, Souaiaia, Tade, Spaethling, Jennifer M, Walker, Christopher P, Wang, Jinhui, Wang, Kai, Wang, Wei, Wildberg, Andre, Zheng, Lina, Chow, Robert H, Eberwine, James, Knowles, James A, Zhang, Kun, Kim, Junhyong
Published in BMC genomics (24.11.2016)
Published in BMC genomics (24.11.2016)
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Journal Article
Abstract 5381: A highly sensitive method for noninvasive cancer profiling through targeted methylation sequencing of circulating cell-free DNA
Liu, Li, Toung, Jonathan M., Vijayaraghavan, Raakhee, Zhang, Ruoyu, Huang, Helen J., Hinoue, Toshinori, Shen, Hui, Salathia, Neeraj, Bibikova, Marina, Shen, Richard, Gutekunst, Karen, Laird, Peter W., Janku, Filip, Fan, Jian-Bing
Published in Cancer research (Chicago, Ill.) (01.07.2017)
Published in Cancer research (Chicago, Ill.) (01.07.2017)
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Journal Article
Development and validation of an ultra-deep next-generation sequencing assay for testing of plasma cell-free DNA from patients with advanced cancer
Janku, Filip, Zhang, Shile, Waters, Jill, Liu, Li, Huang, Helen J., Subbiah, Vivek, Hong, David S., Karp, Daniel D., Fu, Siqing, Cai, Xuyu, Ramzanali, Nishma M., Madwani, Kiran, Cabrilo, Goran, Andrews, Debra D., Zhao, Yue, Javle, Milind, Kopetz, E. Scott, Luthra, Rajyalakshmi, Kim, Hyunsung J., Gnerre, Sante, Satya, Ravi Vijaya, Chuang, Han-Yu, Kruglyak, Kristina M., Toung, Jonathan, Zhao, Chen, Shen, Richard, Heymach, John V., Meric-Bernstam, Funda, Mills, Gordon B., Fan, Jian-Bing, Salathia, Neeraj S.
Published in Clinical cancer research (23.05.2017)
Published in Clinical cancer research (23.05.2017)
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Journal Article