Extreme genetic signatures of local adaptation during Lotus japonicus colonization of Japan
Shah, Niraj, Wakabayashi, Tomomi, Kawamura, Yasuko, Skovbjerg, Cathrine Kiel, Wang, Ming-Zhuo, Mustamin, Yusdar, Isomura, Yoshiko, Gupta, Vikas, Jin, Haojie, Mun, Terry, Sandal, Niels, Azuma, Fuyuki, Fukai, Eigo, Seren, Ümit, Kusakabe, Shohei, Kikuchi, Yuki, Nitanda, Shogo, Kumaki, Takashi, Hashiguchi, Masatsugu, Tanaka, Hidenori, Hayashi, Atsushi, Sønderkær, Mads, Nielsen, Kaare Lehmann, Schneeberger, Korbinian, Vilhjalmsson, Bjarni, Akashi, Ryo, Stougaard, Jens, Sato, Shusei, Schierup, Mikkel Heide, Andersen, Stig Uggerhøj
Published in Nature communications (14.01.2020)
Published in Nature communications (14.01.2020)
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Journal Article
Genome sequence and analysis of the tuber crop potato
Xu, Xun, Pan, Shengkai, Cheng, Shifeng, Zhang, Bo, Mu, Desheng, Ni, Peixiang, Zhang, Gengyun, Yang, Shuang, Li, Ruiqiang, Wang, Jun, Orjeda, Gisella, Guzman, Frank, Torres, Michael, Lozano, Roberto, Ponce, Olga, Martinez, Diana, De la Cruz, Germán, Chakrabarti, S K, Patil, Virupaksh U, Skryabin, Konstantin G, Kuznetsov, Boris B, Ravin, Nikolai V, Kolganova, Tatjana V, Beletsky, Alexey V, Mardanov, Andrei V, Di Genova, Alex, Bolser, Daniel M, Martin, David M A, Li, Guangcun, Yang, Yu, Kuang, Hanhui, Hu, Qun, Xiong, Xingyao, Bishop, Gerard J, Sagredo, Boris, Mejía, Nilo, Zagorski, Wlodzimierz, Gromadka, Robert, Gawor, Jan, Szczesny, Pawel, Huang, Sanwen, Zhang, Zhonghua, Liang, Chunbo, He, Jun, Li, Ying, He, Ying, Xu, Jianfei, Zhang, Youjun, Xie, Binyan, Du, Yongchen, Qu, Dongyu, Bonierbale, Merideth, Ghislain, Marc, Herrera, Maria del Rosario, Giuliano, Giovanni, Pietrella, Marco, Perrotta, Gaetano, Facella, Paolo, O'Brien, Kimberly, Feingold, Sergio E, Barreiro, Leandro E, Massa, Gabriela A, Diambra, Luis, Whitty, Brett R, Vaillancourt, Brieanne, Lin, Haining, Massa, Alicia N, Geoffroy, Michael, Lundback, Steven, DellaPenna, Dean, Buell, C Robin, Sharma, Sanjeev Kumar, Marshall, David F, Waugh, Robbie, Bryan, Glenn J, Destefanis, Marialaura, Nagy, Istvan, Milbourne, Dan, Thomson, Susan J, Fiers, Mark, Jacobs, Jeanne M E, Nielsen, Kåre L, Sønderkær, Mads, Iovene, Marina, Torres, Giovana A, Jiang, Jiming, Veilleux, Richard E, Bachem, Christian W B, de Boer, Jan, Borm, Theo, Kloosterman, Bjorn, van Eck, Herman, Datema, Erwin, Hekkert, Bas te Lintel, Goverse, Aska, van Ham, Roeland C H J, Visser, Richard G F
Published in Nature (London) (14.07.2011)
Published in Nature (London) (14.07.2011)
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Journal Article
The mutational profile of immune surveillance genes in diagnostic and refractory/relapsed DLBCLs
Nesic, Marijana, Sønderkær, Mads, Brøndum, Rasmus Froberg, El-Galaly, Tarec Christoffer, Pedersen, Inge Søkilde, Bøgsted, Martin, Dybkær, Karen
Published in BMC cancer (18.07.2021)
Published in BMC cancer (18.07.2021)
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Journal Article
The transcriptome of compatible and incompatible interactions of potato (Solanum tuberosum) with Phytophthora infestans revealed by DeepSAGE analysis
Gyetvai, Gabor, Sønderkær, Mads, Göbel, Ulrike, Basekow, Rico, Ballvora, Agim, Imhoff, Maren, Kersten, Birgit, Nielsen, Kåre-Lehman, Gebhardt, Christiane
Published in PloS one (06.02.2012)
Published in PloS one (06.02.2012)
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Construction of reference chromosome-scale pseudomolecules for potato: integrating the potato genome with genetic and physical maps
Sharma, Sanjeev Kumar, Bolser, Daniel, de Boer, Jan, Sønderkær, Mads, Amoros, Walter, Carboni, Martin Federico, D'Ambrosio, Juan Martín, de la Cruz, German, Di Genova, Alex, Douches, David S, Eguiluz, Maria, Guo, Xiao, Guzman, Frank, Hackett, Christine A, Hamilton, John P, Li, Guangcun, Li, Ying, Lozano, Roberto, Maass, Alejandro, Marshall, David, Martinez, Diana, McLean, Karen, Mejía, Nilo, Milne, Linda, Munive, Susan, Nagy, Istvan, Ponce, Olga, Ramirez, Manuel, Simon, Reinhard, Thomson, Susan J, Torres, Yerisf, Waugh, Robbie, Zhang, Zhonghua, Huang, Sanwen, Visser, Richard G F, Bachem, Christian W B, Sagredo, Boris, Feingold, Sergio E, Orjeda, Gisella, Veilleux, Richard E, Bonierbale, Merideth, Jacobs, Jeanne M E, Milbourne, Dan, Martin, David Michael Alan, Bryan, Glenn J
Published in G3 (Bethesda, Md.) (01.11.2013)
Published in G3 (Bethesda, Md.) (01.11.2013)
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Journal Article
Transcriptome analysis suggests that starch synthesis may proceed via multiple metabolic routes in high yielding potato cultivars
Kaminski, Kacper Piotr, Petersen, Annabeth Høgh, Sønderkær, Mads, Pedersen, Lars Haastrup, Pedersen, Henrik, Feder, Christian, Nielsen, Kåre L
Published in PloS one (17.12.2012)
Published in PloS one (17.12.2012)
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Journal Article
Functional amyloid in Pseudomonas
Dueholm, Morten S, Petersen, Steen V, Sønderkær, Mads, Larsen, Poul, Christiansen, Gunna, Hein, Kim L, Enghild, Jan J, Nielsen, Jeppe L, Nielsen, Kåre L, Nielsen, Per H, Otzen, Daniel E
Published in Molecular microbiology (01.08.2010)
Published in Molecular microbiology (01.08.2010)
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Journal Article
Combining conventional QTL analysis and whole-exome capture-based bulk-segregant analysis provides new genetic insights into tuber sprout elongation and dormancy release in a diploid potato population
Sharma, Sanjeev Kumar, McLean, Karen, Colgan, Richard J, Rees, Debbie, Young, Stephen, Sønderkær, Mads, Terry, Leon A, Turnbull, Colin, Taylor, Mark A, Bryan, Glenn J
Published in Heredity (01.09.2021)
Published in Heredity (01.09.2021)
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Journal Article
Is range expansion of introduced Scotch broom (Cytisus scoparius) in Denmark limited by winter cold tolerance?
Winde, Jacob, Sønderkær, Mads, Nielsen, Kåre L., Pagter, Majken
Published in Plant ecology (01.08.2020)
Published in Plant ecology (01.08.2020)
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Journal Article
Implementing the FAIR Data Principles in precision oncology: review of supporting initiatives
Vesteghem, Charles, Brøndum, Rasmus Froberg, Sønderkær, Mads, Sommer, Mia, Schmitz, Alexander, Bødker, Julie Støve, Dybkær, Karen, El-Galaly, Tarec Christoffer, Bøgsted, Martin
Published in Briefings in bioinformatics (21.05.2020)
Published in Briefings in bioinformatics (21.05.2020)
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Journal Article
Oral mucosa tissue gene expression profiling before, during, and after radiation therapy for tonsil squamous cell carcinoma
Marcussen, Mette, Sønderkær, Mads, Bødker, Julie Støve, Andersen, Maria, Nielsen, Søren, Vesteghem, Charles, Christiansen, Ilse, Bergmann, Olav Jonas, Bøgsted, Martin, Dybkær, Karen, Vyberg, Mogens, Johnsen, Hans Erik
Published in PloS one (16.01.2018)
Published in PloS one (16.01.2018)
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Journal Article
Biochemical Foundations of Health and Energy Conservation in Hibernating Free-ranging Subadult Brown Bear Ursus arctos
Welinder, Karen Gjesing, Hansen, Rasmus, Overgaard, Michael Toft, Brohus, Malene, Sønderkær, Mads, von Bergen, Martin, Rolle-Kampczyk, Ulrike, Otto, Wolfgang, Lindahl, Tomas L., Arinell, Karin, Evans, Alina L., Swenson, Jon E., Revsbech, Inge G., Frøbert, Ole
Published in The Journal of biological chemistry (21.10.2016)
Published in The Journal of biological chemistry (21.10.2016)
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Journal Article
The Effect of Non-pooled Multidonor Faecal Microbiota Transplantation for Inducing Clinical Remission in Patients with Chronic Pouchitis: Results from a Multicentre, Randomised, Double-blinded, Placebo-controlled Trial [MicroPouch]
Kousgaard, Sabrina Just, Cold, Frederik, Halkjær, Sofie Ingdam, Petersen, Andreas Munk, Kjeldsen, Jens, Hansen, Jane Møller, Dall, Sebastian Mølvang, Albertsen, Mads, Nielsen, Hans Linde, Kirk, Karina Frahm, Duch, Kirsten, Sønderkær, Mads, Thorlacius-Ussing, Ole
Published in Journal of Crohn's and colitis (04.11.2024)
Published in Journal of Crohn's and colitis (04.11.2024)
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Journal Article
Feasibility and early clinical impact of precision medicine for late-stage cancer patients in a regional public academic hospital
Ladekarl, Morten, Nøhr, Anne Krogh, Sønderkær, Mads, Dahl, Simon Christian, Sunde, Lone, Vestereghem, Charles, Mapendano, Christophe Kamungu, Haslund, Charlotte Aaquist, Pagh, Anja, Carus, Andreas, Lörincz, Tamás, Nowicka-Matus, Kinga, Poulsen, Laurids Ø., Laursen, René Johannes, Dybkær, Karen, Poulsen, Birgitte Klindt, Frøkjær, Jens Brøndum, Brügmann, Anja Høegh, Ernst, Anja, Wanders, Alkwin, Bøgsted, Martin, Pedersen, Inge Søkilde
Published in Acta oncologica (04.03.2023)
Published in Acta oncologica (04.03.2023)
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Journal Article
Cytosolic glutamine synthetase is important for photosynthetic efficiency and water use efficiency in potato as revealed by high-throughput sequencing QTL analysis
Kaminski, Kacper Piotr, Kørup, Kirsten, Andersen, Mathias Neumann, Sønderkær, Mads, Andersen, Mette Sondrup, Kirk, Hanne Grethe, Nielsen, Kåre Lehmann
Published in Theoretical and applied genetics (01.11.2015)
Published in Theoretical and applied genetics (01.11.2015)
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Journal Article
Development of a Precision Medicine Workflow in Hematological Cancers, Aalborg University Hospital, Denmark
Bødker, Julie S, Sønderkær, Mads, Vesteghem, Charles, Schmitz, Alexander, Brøndum, Rasmus F, Sommer, Mia, Rytter, Anne S, Nielsen, Marlene M, Madsen, Jakob, Jensen, Paw, Pedersen, Inge S, Grubach, Lykke, Severinsen, Marianne T, Roug, Anne S, El-Galaly, Tarec C, Dybkær, Karen, Bøgsted, Martin
Published in Cancers (29.01.2020)
Published in Cancers (29.01.2020)
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Journal Article
Verticillium dahliae Disease Resistance and the Regulatory Pathway for Maturity and Tuberization in Potato
Tai, Helen H., De Koeyer, David, Sønderkær, Mads, Hedegaard, Sanne, Lagüe, Martin, Goyer, Claudia, Nolan, Lana, Davidson, Charlotte, Gardner, Kyle, Neilson, Jonathan, Paudel, Jamuna Risal, Murphy, Agnes, Bizimungu, Benoit, Wang, Hui Ying, Xiong, Xingyao, Halterman, Dennis, Nielsen, Kåre Lehmann
Published in The plant genome (01.03.2018)
Published in The plant genome (01.03.2018)
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Journal Article
Next Generation Sequencing Bulk Segregant Analysis of Potato Support that Differential Flux into the Cholesterol and Stigmasterol Metabolite Pools Is Important for Steroidal Glycoalkaloid Content
Kaminski, Kacper Piotr, Kirsten Kørup, Mathias Neumann Andersen, Mads Sønderkær, Mette Sondrup Andersen, Hanne Grethe Kirk, Kåre Lehmann Nielsen
Published in Potato research (01.03.2016)
Published in Potato research (01.03.2016)
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Journal Article
A model system for assessing and comparing the ability of exon microarray and tag sequencing to detect genes specific for malignant B-cells
Kloster, Maria Bro, Bilgrau, Anders Ellern, Rodrigo-Domingo, Maria, Bergkvist, Kim Steve, Schmitz, Alexander, Sønderkær, Mads, Bødker, Julie Støve, Falgreen, Steffen, Nyegaard, Mette, Johnsen, Hans Erik, Nielsen, Kåre Lehmann, Dybkaer, Karen, Bøgsted, Martin
Published in BMC genomics (05.11.2012)
Published in BMC genomics (05.11.2012)
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