Fission stories: using PomBase to understand Schizosaccharomyces pombe biology
Harris, Midori A, Rutherford, Kim M, Hayles, Jacqueline, Lock, Antonia, Bähler, Jürg, Oliver, Stephen G, Mata, Juan, Wood, Valerie
Published in Genetics (Austin) (04.04.2022)
Published in Genetics (Austin) (04.04.2022)
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Journal Article
JaponicusDB: rapid deployment of a model organism database for an emerging model species
Rutherford, Kim M, Harris, Midori A, Oliferenko, Snezhana, Wood, Valerie
Published in Genetics (Austin) (04.04.2022)
Published in Genetics (Austin) (04.04.2022)
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Journal Article
Term Matrix: a novel Gene Ontology annotation quality control system based on ontology term co-annotation patterns
Wood, Valerie, Carbon, Seth, Harris, Midori A, Lock, Antonia, Engel, Stacia R, Hill, David P, Van Auken, Kimberly, Attrill, Helen, Feuermann, Marc, Gaudet, Pascale, Lovering, Ruth C, Poux, Sylvain, Rutherford, Kim M, Mungall, Christopher J
Published in Open biology (01.09.2020)
Published in Open biology (01.09.2020)
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Journal Article
ACT: the Artemis comparison tool
Carver, Tim J., Rutherford, Kim M., Berriman, Matthew, Rajandream, Marie-Adele, Barrell, Barclay G., Parkhill, Julian
Published in Bioinformatics (15.08.2005)
Published in Bioinformatics (15.08.2005)
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Journal Article
Canto: an online tool for community literature curation
Rutherford, Kim M, Harris, Midori A, Lock, Antonia, Oliver, Stephen G, Wood, Valerie
Published in Bioinformatics (Oxford, England) (15.06.2014)
Published in Bioinformatics (Oxford, England) (15.06.2014)
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Journal Article
Molecular structure of sauropsid β-keratins from tuatara (Sphenodon punctatus)
Parry, David A.D., Fraser, R.D. Bruce, Alibardi, Lorenzo, Rutherford, Kim M., Gemmell, Neil
Published in Journal of structural biology (01.07.2019)
Published in Journal of structural biology (01.07.2019)
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Journal Article
Stress, novel sex genes, and epigenetic reprogramming orchestrate socially controlled sex change
Todd, Erica V, Ortega-Recalde, Oscar, Liu, Hui, Lamm, Melissa S, Rutherford, Kim M, Cross, Hugh, Black, Michael A, Kardailsky, Olga, Marshall Graves, Jennifer A, Hore, Timothy A, Godwin, John R, Gemmell, Neil J
Published in Science advances (01.07.2019)
Published in Science advances (01.07.2019)
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Journal Article
Author Correction: Dense sampling of bird diversity increases power of comparative genomics
Feng, Shaohong, Armstrong, Joel, Fang, Qi, Reeve, Andrew Hart, Xie, Duo, Chen, Guangji, Guo, Chunxue, Petersen, Bent, Wang, Zongji, Zhou, Qi, Diekhans, Mark, Chen, Wanjun, Andreu-Sánchez, Sergio, Margaryan, Ashot, Howard, Jason Travis, Parent, Carole, Pacheco, George, Sinding, Mikkel-Holger S., Puetz, Lara, Cavill, Emily, Eckhart, Leopold, Christidis, Les, Sicheritz-Ponten, Thomas, Tietze, Dieter Thomas, Song, Gang, Borgia, Gerald, Lovette, Irby J., Cowen, Saul J., Njoroge, Peter, Ryder, Oliver A., Fuchs, Jérôme, Bunce, Michael, Burt, David W., Cracraft, Joel, Hackett, Shannon J., Jamieson, Ian G., Braun, Edward L., Mirarab, Siavash, Suh, Alexander, Hansson, Bengt, Stervander, Martin, Frandsen, Paul B., van der Zwan, Henriette, van der Sluis, Rencia, Visser, Carina, Balakrishnan, Christopher N., Cloutier, Alison, Sackton, Timothy B., Shakya, Subir B., Sheldon, Frederick H., Soares, André E. R., Shapiro, Beth, González-Solís, Jacob, Rozas, Julio, Riutort, Marta, Dalén, Love, Urrutia, Araxi O., Székely, Tamás, Liu, Yang, Campana, Michael G., Corvelo, André, Fleischer, Robert C., Rutherford, Kim M., Dussex, Nicolas, Thiele, Nadine, Delmore, Kira, Liedvogel, Miriam, Hoeppner, Marc P., Ketterson, Ellen D., Fidler, Andrew Eric, Parody-Merino, Ángela M., Battley, Phil F., Cox, Murray P., Lima, Nicholas Costa Barroso, Parchman, Thomas Lee, Blake, John G., Day, Lainy B., Fuxjager, Matthew J., Baldwin, Maude W., Braun, Michael J., Wirthlin, Morgan, Dikow, Rebecca B., Keller, Lukas F., Hauber, Mark E., Louder, Matthew I. M., McGuire, Jimmy A., Mudge, Joann, Wang, Biao, Taylor, Scott A., Aleixo, Alexandre, Vasconcelos, Ana Tereza Ribeiro, Weir, Jason T., Li, Qiye, Yang, Huanming, Wang, Jian, Gilbert, M. Thomas P., Graves, Gary R., Jarvis, Erich D., Paten, Benedict, Zhang, Guojie
Published in Nature (London) (29.04.2021)
Published in Nature (London) (29.04.2021)
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Journal Article
Dense sampling of bird diversity increases power of comparative genomics (vol 587, pg 252, 2020)
Stiller, J, Deng, Y, Armstrong, J, Fang, Q, Reeve, A H, Xie, D, Faircloth, B C, Diekhans, M, Margaryan, A, Howard, J T, Parent, C, Puetz, L, Cavill, E, Ribeiro, A M, Fjeldsa, J, Hosner, P A, Christidis, L, Tietze, D T, Robertson, B C, Song, G, Borgia, G, Cowen, S J, Njoroge, P, Dumbacher, J P, Ryder, O A, Fuchs, J, Bunce, M, Burt, D W, Meng, G L, Ryan, P G, Jamieson, I G, da Fonseca, R R, Braun, E L, Houde, P, Mirarab, S, Suh, A, Hansson, B, Frandsen, P B, Balakrishnan, C N, Clark, A G, Fitzpatrick, J W, Bowman, R, Chen, N, Cloutier, A, Edwards, S V, Foote, D J, Shakya, S B, Sheldon, F H, Shapiro, B, Gonzalez-Solis, J, Ferrer-Obiol, J, Riutort, M, Tigano, A, Friesen, V, Urrutia, A O, Szekely, T, Liu, Y, Campana, M G, Corvelo, A, Fleischer, R C, Gemmell, N J, Thiele, N, Delmore, K, Franke, A, Hoeppner, M P, Fudickar, A M, Mila, B, Fidler, A E, Friis, G, Parody-Merino, A M, Battley, P F, Cox, M P, Prosdocimi, F, Parchman, T L, Schlinger, B A, Loiselle, B A, Lim, H C, Fuxjager, M J, Baldwin, M W, Braun, M J, Wirthlin, M, Ryder, T B, Camenisch, G, Keller, L F, DaCosta, J M, Hauber, M E, Louder, M I M, Witt, C C, Carling, M D, Taylor, S A, Del-Rio, G, Aleixo, A, Vasconcelos, A T R, Mello, C V, Weir, J T, Haussler, D, Yang, H M, Wang, J, Paten, B, Zhang, G J
Published in Nature (London) (29.04.2021)
Published in Nature (London) (29.04.2021)
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Journal Article
Term Matrix: A novel Gene Ontology annotation quality control system based on ontology term co-annotation patterns
Wood, Valerie, Carbon, Seth, Harris, Midori A, Lock, Antonia, Engel, Stacia R, Hill, David P, Kimberley Van Auken, Attrill, Helen, Feuermann, Marc, Gaudet, Pascale, Lovering, Ruth C, Poux, Sylvain, Rutherford, Kim M, Mungall, Christopher J
Published in bioRxiv (23.04.2020)
Published in bioRxiv (23.04.2020)
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Paper
Analysis of 114 kb of DNA sequence from fission yeast chromosome 2 immediately centromere-distal tohis5
Xiang, Zheng, Moore, Karen, Wood, Valerie, Rajandream, Maire-Ad le, Barrell, Barclay G., Skelton, Jason, Churcher, Carol M., Lyne, Michael H., Devlin, Karen, Gwilliam, Rhian, Rutherford, Kim M., Aves, Stephen J.
Published in Yeast (Chichester, England) (01.11.2000)
Published in Yeast (Chichester, England) (01.11.2000)
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Journal Article
Stress, novel sex genes and epigenetic reprogramming orchestrate socially-controlled sex change
Todd, Erica V, Ortega-Recalde, Oscar, Liu, Hui, Lamm, Melissa S, Rutherford, Kim M, Cross, Hugh, Black, Michael A, Kardailsky, Olga, Graves, Jennifer A, Hore, Timothy A, Godwin, John R, Gemmell, Neil J
Published in bioRxiv (03.12.2018)
Published in bioRxiv (03.12.2018)
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Paper
Analysis of 114 kb of DNA sequence from fission yeast chromosome 2 immediately centromere‐distal to his5
Xiang, Zheng, Moore, Karen, Wood, Valerie, Rajandream, Maire‐Adèle, Barrell, Barclay G., Skelton, Jason, Churcher, Carol M., Lyne, Michael H., Devlin, Karen, Gwilliam, Rhian, Rutherford, Kim M., Aves, Stephen J.
Published in Yeast (Chichester, England) (01.11.2000)
Published in Yeast (Chichester, England) (01.11.2000)
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Journal Article