Whole-genome fingerprint of the DNA methylome during human B cell differentiation
Kulis, Marta, Merkel, Angelika, Heath, Simon, Queirós, Ana C, Schuyler, Ronald P, Castellano, Giancarlo, Beekman, Renée, Raineri, Emanuele, Esteve, Anna, Clot, Guillem, Verdaguer-Dot, Néria, Duran-Ferrer, Martí, Russiñol, Nuria, Vilarrasa-Blasi, Roser, Ecker, Simone, Pancaldi, Vera, Rico, Daniel, Agueda, Lidia, Blanc, Julie, Richardson, David, Clarke, Laura, Datta, Avik, Pascual, Marien, Agirre, Xabier, Prosper, Felipe, Alignani, Diego, Paiva, Bruno, Caron, Gersende, Fest, Thierry, Muench, Marcus O, Fomin, Marina E, Lee, Seung-Tae, Wiemels, Joseph L, Valencia, Alfonso, Gut, Marta, Flicek, Paul, Stunnenberg, Hendrik G, Siebert, Reiner, Küppers, Ralf, Gut, Ivo G, Campo, Elías, Martín-Subero, José I
Published in Nature genetics (01.07.2015)
Published in Nature genetics (01.07.2015)
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Decoding the DNA Methylome of Mantle Cell Lymphoma in the Light of the Entire B Cell Lineage
Queirós, Ana C., Beekman, Renée, Vilarrasa-Blasi, Roser, Duran-Ferrer, Martí, Clot, Guillem, Merkel, Angelika, Raineri, Emanuele, Russiñol, Nuria, Castellano, Giancarlo, Beà, Sílvia, Navarro, Alba, Kulis, Marta, Verdaguer-Dot, Núria, Jares, Pedro, Enjuanes, Anna, Calasanz, María José, Bergmann, Anke, Vater, Inga, Salaverría, Itziar, van de Werken, Harmen J.G., Wilson, Wyndham H., Datta, Avik, Flicek, Paul, Royo, Romina, Martens, Joost, Giné, Eva, Lopez-Guillermo, Armando, Stunnenberg, Hendrik G., Klapper, Wolfram, Pott, Christiane, Heath, Simon, Gut, Ivo G., Siebert, Reiner, Campo, Elías, Martín-Subero, José I.
Published in Cancer cell (14.11.2016)
Published in Cancer cell (14.11.2016)
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Chromatin activation as a unifying principle underlying pathogenic mechanisms in multiple myeloma
Ordoñez, Raquel, Kulis, Marta, Russiñol, Nuria, Chapaprieta, Vicente, Carrasco-Leon, Arantxa, García-Torre, Beatriz, Charalampopoulou, Stella, Clot, Guillem, Beekman, Renée, Meydan, Cem, Duran-Ferrer, Martí, Verdaguer-Dot, Núria, Vilarrasa-Blasi, Roser, Soler-Vila, Paula, Garate, Leire, Miranda, Estíbaliz, San José-Enériz, Edurne, Rodriguez-Madoz, Juan R, Ezponda, Teresa, Martínez-Turrilas, Rebeca, Vilas-Zornoza, Amaia, Lara-Astiaso, David, Dupéré-Richer, Daphné, Martens, Joost H A, El-Omri, Halima, Taha, Ruba Y, Calasanz, Maria J, Paiva, Bruno, San Miguel, Jesus, Flicek, Paul, Gut, Ivo, Melnick, Ari, Mitsiades, Constantine S, Licht, Jonathan D, Campo, Elias, Stunnenberg, Hendrik G, Agirre, Xabier, Prosper, Felipe, Martin-Subero, Jose I
Published in Genome research (01.09.2020)
Published in Genome research (01.09.2020)
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Whole-epigenome analysis in multiple myeloma reveals DNA hypermethylation of B cell-specific enhancers
Agirre, Xabier, Castellano, Giancarlo, Pascual, Marien, Heath, Simon, Kulis, Marta, Segura, Victor, Bergmann, Anke, Esteve, Anna, Merkel, Angelika, Raineri, Emanuele, Agueda, Lidia, Blanc, Julie, Richardson, David, Clarke, Laura, Datta, Avik, Russiñol, Nuria, Queirós, Ana C, Beekman, Renée, Rodríguez-Madoz, Juan R, San José-Enériz, Edurne, Fang, Fang, Gutiérrez, Norma C, García-Verdugo, José M, Robson, Michael I, Schirmer, Eric C, Guruceaga, Elisabeth, Martens, Joost H A, Gut, Marta, Calasanz, Maria J, Flicek, Paul, Siebert, Reiner, Campo, Elías, Miguel, Jesús F San, Melnick, Ari, Stunnenberg, Hendrik G, Gut, Ivo G, Prosper, Felipe, Martín-Subero, José I
Published in Genome research (01.04.2015)
Published in Genome research (01.04.2015)
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Journal Article
Dynamics of genome architecture and chromatin function during human B cell differentiation and neoplastic transformation
Vilarrasa-Blasi, Roser, Soler-Vila, Paula, Verdaguer-Dot, Núria, Russiñol, Núria, Di Stefano, Marco, Chapaprieta, Vicente, Clot, Guillem, Farabella, Irene, Cuscó, Pol, Kulis, Marta, Agirre, Xabier, Prosper, Felipe, Beekman, Renée, Beà, Silvia, Colomer, Dolors, Stunnenberg, Hendrik G., Gut, Ivo, Campo, Elias, Marti-Renom, Marc A., Martin-Subero, José Ignacio
Published in Nature communications (28.01.2021)
Published in Nature communications (28.01.2021)
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Identification of two unannotated miRNAs in classic Hodgkin lymphoma cell lines
Ustaszewski, Adam, Paczkowska, Julia, Janiszewska, Joanna, Bernhart, Stephan H, Bein, Julia, Russiñol, Núria, Hansmann, Martin-Leo, Chapaprieta, Vicente, Martín-Subero, José I, Siebert, Reiner, Hartmann, Sylvia, Giefing, Maciej
Published in PloS one (24.03.2023)
Published in PloS one (24.03.2023)
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Chromatin activation profiling of stereotyped chronic lymphocytic leukemias reveals a subset 8–specific signature
Tsagiopoulou, Maria, Chapaprieta, Vicente, Russiñol, Nuria, García-Torre, Beatriz, Pechlivanis, Nikolaos, Nadeu, Ferran, Papakonstantinou, Nikos, Stavroyianni, Niki, Chatzidimitriou, Anastasia, Psomopoulos, Fotis, Campo, Elías, Stamatopoulos, Kostas, Martín-Subero, José Ignacio
Published in Blood (15.06.2023)
Published in Blood (15.06.2023)
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IGLV3-21R110 mutation has prognostic value in patients with treatment-naive chronic lymphocytic leukemia
Syrykh, Charlotte, Pons-Brun, Berta, Russiñol, Núria, Playa-Albinyana, Heribert, Baumann, Tycho, Duran-Ferrer, Martí, Kulis, Marta, Carbó-Meix, Anna, Mozas, Pablo, Alcoceba, Miguel, González, Marcos, Navarro-Bailón, Almudena, Colado, Enrique, Payer, Ángel R., Aymerich, Marta, Terol, María J., Lu, Junyan, Knisbacher, Binyamin A., Hahn, Cynthia K., Ruiz-Gaspà, Sílvia, Enjuanes, Anna, Wu, Catherine J., Getz, Gad, Zenz, Thorsten, López-Guillermo, Armando, Martín-Subero, José I., Colomer, Dolors, Delgado, Julio, Campo, Elías, Nadeu, Ferran
Published in Blood advances (12.12.2023)
Published in Blood advances (12.12.2023)
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Genome-Wide Histone Acetylation Profiling in Chronic Lymphocytic Leukemia Reveals a Distinctive Signature in Stereotyped Subset #8
Tsagiopoulou, Maria, Chapaprieta, Vicente, Russiñol, Nuria, Psomopoulos, Fotis, Papakonstantinou, Nikos, Stavroyianni, Niki, Anagnostopoulos, Achilles, Kollia, Panagoula, Campo, Elias, Stamatopoulos, Kostas, Martin-Subero, José I.
Published in BLOOD (13.11.2019)
Published in BLOOD (13.11.2019)
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Conference Proceeding
Whole-Genome Analysis of the Chromatin Structure in Multiple Myeloma
Kulis, Marta, Ordoñez, Raquel, Russiñol, Nuria, Beekman, Renée, Verdaguer-Dot, Núria, Ezponda, Teresa, Carrasco, Arantxa, Martens, Joost H.A., Stunnenberg, Hendrik G., Paiva, Bruno, San Miguel, Jesus, Campo, Elias, Prosper, Felipe, Agirre, Xabier, Martin-Subero, José I.
Published in Blood (02.12.2016)
Published in Blood (02.12.2016)
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Aberrant Expression of the SOX11 Oncogene in Mantle Cell Lymphoma Is Associated with Activation and De Novo 3D Looping of a Distant Enhancer Element
Vilarrasa-Blasi, Roser, Queirós, Ana C., Beekman, Renée, Russiñol, Nuria, Castellano, Giancarlo, Blanc, Julie, Serra, François, Beà, Sílvia, Kulis, Marta, Verdaguer-Dot, Núria, Enjuanes, Anna, Bergmann, Anke, Salaverria, Itziar, van de Werken, Harmen J.G., Datta, Avik, Flicek, Paul, Martens, Joost H.A., Stunnenberg, Hendrik G., Gut, Marta, Marti-Renom, Marc A., Gut, Ivo G., Siebert, Reiner, Campo, Elias, Martin-Subero, José I.
Published in Blood (02.12.2016)
Published in Blood (02.12.2016)
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Journal Article
Characterization of the DNA Methylome during Human B-Cell Differentiation
Kulis, Marta, Heath, Simon, Castellano, Giancarlo, Beekman, Renée, Merkel, Angelika, Raineri, Emanuele, Esteve, Anna, Queirós, Ana C, Clot, Guillem, Schuyler, Ronald, Ecker, Simone, Pancaldi, Vera, Rico, Daniel, Agueda, Lidia, Blanc, Julie, Richardson, David, Clarke, Laura, Datta, Avik, Russiñol, Nuria, Pascual, Marien, Aguirre, Xavier, Prosper, Felipe, Alignani, Diego, Paiva, Bruno, Caron, Gersende, Fest, Thierry, Muench, Marcus O., Fomin, Marina, Lee, Seung-Tae, Wiemels, Joseph L., Valencia, Alfonso, Gut, Marta, Flicek, Paul, Stunnenberg, Hendrik G., Siebert, Reiner, Küppers, Ralf, Gut, Ivo G., Campo, Elias, Martín-Subero, José I.
Published in Blood (06.12.2014)
Published in Blood (06.12.2014)
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Journal Article
Whole-Genome Epigenomic Analysis in Multiple Myeloma Reveals DNA Hypermethylation of B-Cell Specific Enhancers
Agirre, Xabier, Castellano, Giancarlo, Pascual, Marien, Health, Simon, Kulis, Marta, Segura, Victor, Bergmann, Anke, Esteve, Anna, Merkel, Angelika, Raineri, Emanuele, Agueda, Lidia, Blanc, Julie, Richardson, David, Clarke, Laura, Russiñol, Nuria, Queirós, Ana C., Beekman, Renée, Rodriguez-Madoz, Juan R., San José-Enériz, Edurne, Fang, Fang, Gutierrez, Norma Carmen, García-Verdugo, José M, Robson, Michael I., Schirmer, Eric C., Guruceaga, Elisabeth, Martens, Joost H.A., Gut, Marta, Calasanz, María José, Flicek, Paul, Siebert, Reiner, Campo, Elias, San Miguel, Jesus F., Melnick, Ari M, Stunnenberg, Hendrik G., Gut, Ivo G., Prosper, Felipe, Martín-Subero, Jose Ignacio
Published in Blood (06.12.2014)
Published in Blood (06.12.2014)
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Journal Article
The reference epigenome and regulatory chromatin landscape of chronic lymphocytic leukemia
Beekman, Renée, Chapaprieta, Vicente, Russiñol, Núria, Vilarrasa-Blasi, Roser, Verdaguer-Dot, Núria, Martens, Joost H. A., Duran-Ferrer, Martí, Kulis, Marta, Serra, François, Javierre, Biola M., Wingett, Steven W., Clot, Guillem, Queirós, Ana C., Castellano, Giancarlo, Blanc, Julie, Gut, Marta, Merkel, Angelika, Heath, Simon, Vlasova, Anna, Ullrich, Sebastian, Palumbo, Emilio, Enjuanes, Anna, Martín-García, David, Beà, Sílvia, Pinyol, Magda, Aymerich, Marta, Royo, Romina, Puiggros, Montserrat, Torrents, David, Datta, Avik, Lowy, Ernesto, Kostadima, Myrto, Roller, Maša, Clarke, Laura, Flicek, Paul, Agirre, Xabier, Prosper, Felipe, Baumann, Tycho, Delgado, Julio, López-Guillermo, Armando, Fraser, Peter, Yaspo, Marie-Laure, Guigó, Roderic, Siebert, Reiner, Martí-Renom, Marc A., Puente, Xose S., López-Otín, Carlos, Gut, Ivo, Stunnenberg, Hendrik G., Campo, Elias, Martin-Subero, Jose I.
Published in Nature medicine (01.06.2018)
Published in Nature medicine (01.06.2018)
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Journal Article
Dynamics of genome architecture and chromatin function during human B cell differentiation and neoplastic transformation
Vilarrasa-Blasi, Roser, Soler-Vila, Paula, Verdaguer-Dot, Nuria, Russinol, Nuria, Marco Di Stefano, Chapaprieta, Vicente, Clot, Guillem, Farabella, Irene, Cusco, Pol, Agirre, Xabier, Prosper, Felipe, Beekman, Renee, Bea, Silvia, Colomer, Dolors, Gut, Ivo G, Stunnenberg, Hendrik G, Campo, Elias, Marti-Renom, Marc A, Martin-Subero, Jose Ignacio
Published in bioRxiv (12.09.2019)
Published in bioRxiv (12.09.2019)
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Paper
Chromatin activation as a unifying principle underlying pathogenic mechanisms in multiple myeloma
Ordonez, Raquel, Kulis, Marta, Russinol, Nuria, Chapaprieta, Vicente, Beekman, Renee, Meydan, Cem, Duran-Ferrer, Marti, Verdaguer-Dot, Nuria, Clot, Guillem, Vilarrasa-Blasi, Roser, Garate, Leire, Miranda, Estibaliz, Carrasco, Arantxa, Ezponda, Teresa, Vilas-Zornoza, Amaia, Lara-Astiaso, David, Dupere-Richer, Daphne, Joost Ha Martens, Torrents, David, El-Omri, Halima, Taha, Ruba Y, Calasanz, Maria J, Paiva, Bruno, Jesus San Miguel, Flicek, Paul, Gut, Ivo, Melnick, Ari, Mitsiades, Constantine S, Licht, Jonathan D, Campo, Elias, Stunnenberg, Hendrik G, Agirre, Xabier, Prosper, Felipe, Martin-Subero, Jose Ignacio
Published in bioRxiv (20.08.2019)
Published in bioRxiv (20.08.2019)
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