Single-base resolution methylomes of somatic embryogenesis in Theobroma cacao L. reveal epigenome modifications associated with somatic embryo abnormalities
Garcia, Claudia, Furtado de Almeida, Alex-Alan, Costa, Marcio, Britto, Dahyana, Correa, Fabio, Mangabeira, Pedro, Silva, Lidiane, Silva, Jose, Royaert, Stefan, Marelli, Jean-Philippe
Published in Scientific reports (05.09.2022)
Published in Scientific reports (05.09.2022)
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Journal Article
SNP markers associated with resistance to frosty pod and black pod rot diseases in an F1 population of Theobroma cacao L
Gutiérrez, Osman A., Puig, Alina S., Phillips-Mora, Wilbert, Bailey, Bryan A., Ali, Shahin S., Mockaitis, Keithanne, Schnell, Raymond J., Livingstone, Donald, Mustiga, Guiliana, Royaert, Stefan, Motamayor, Juan Carlos
Published in Tree genetics & genomes (01.06.2021)
Published in Tree genetics & genomes (01.06.2021)
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Journal Article
Identification of Climate and Genetic Factors That Control Fat Content and Fatty Acid Composition of Theobroma cacao L. Beans
Mustiga, Guiliana M., Morrissey, Joe, Stack, Joseph Conrad, DuVal, Ashley, Royaert, Stefan, Jansen, Johannes, Bizzotto, Carolina, Villela-Dias, Cristiano, Mei, Linkai, Cahoon, Edgar B., Seguine, Ed, Marelli, Jean Philippe, Motamayor, Juan Carlos
Published in Frontiers in plant science (14.10.2019)
Published in Frontiers in plant science (14.10.2019)
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Journal Article
Genetic Parameters and the Impact of Off-Types for Theobroma cacao L. in a Breeding Program in Brazil
DuVal, Ashley, Gezan, Salvador A, Mustiga, Guiliana, Stack, Conrad, Marelli, Jean-Philippe, Chaparro, José, Livingstone, 3rd, Donald, Royaert, Stefan, Motamayor, Juan C
Published in Frontiers in plant science (01.12.2017)
Published in Frontiers in plant science (01.12.2017)
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Journal Article
Population genomic analyses of the chocolate tree, Theobroma cacao L., provide insights into its domestication process
Cornejo, Omar E, Yee, Muh-Ching, Dominguez, Victor, Andrews, Mary, Sockell, Alexandra, Strandberg, Erika, Livingstone, 3rd, Donald, Stack, Conrad, Romero, Alberto, Umaharan, Pathmanathan, Royaert, Stefan, Tawari, Nilesh R, Ng, Pauline, Gutierrez, Osman, Phillips, Wilbert, Mockaitis, Keithanne, Bustamante, Carlos D, Motamayor, Juan C
Published in Communications biology (01.01.2018)
Published in Communications biology (01.01.2018)
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Journal Article
Mapping of a Major QTL for Ceratocystis Wilt Disease in an F1 Population of Theobroma cacao
Fernandes, Luciel Dos Santos, Royaert, Stefan, Corrêa, Fábio M, Mustiga, Guiliana M, Marelli, Jean-Philippe, Corrêa, Ronan X, Motamayor, Juan C
Published in Frontiers in plant science (14.02.2018)
Published in Frontiers in plant science (14.02.2018)
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Journal Article
Making a chocolate chip: development and evaluation of a 6K SNP array for Theobroma cacao
Livingstone, Donald, Royaert, Stefan, Stack, Conrad, Mockaitis, Keithanne, May, Greg, Farmer, Andrew, Saski, Christopher, Schnell, Ray, Kuhn, David, Motamayor, Juan Carlos
Published in DNA research (01.08.2015)
Published in DNA research (01.08.2015)
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Journal Article
Identification of candidate genes involved in Witches' broom disease resistance in a segregating mapping population of Theobroma cacao L. in Brazil
Royaert, Stefan, Jansen, Johannes, da Silva, Daniela Viana, de Jesus Branco, Samuel Martins, Livingstone, 3rd, Donald S, Mustiga, Guiliana, Marelli, Jean-Philippe, Araújo, Ioná Santos, Corrêa, Ronan Xavier, Motamayor, Juan Carlos
Published in BMC genomics (11.02.2016)
Published in BMC genomics (11.02.2016)
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Journal Article
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color
Motamayor, Juan C, Mockaitis, Keithanne, Schmutz, Jeremy, Haiminen, Niina, Livingstone, 3rd, Donald, Cornejo, Omar, Findley, Seth D, Zheng, Ping, Utro, Filippo, Royaert, Stefan, Saski, Christopher, Jenkins, Jerry, Podicheti, Ram, Zhao, Meixia, Scheffler, Brian E, Stack, Joseph C, Feltus, Frank A, Mustiga, Guiliana M, Amores, Freddy, Phillips, Wilbert, Marelli, Jean Philippe, May, Gregory D, Shapiro, Howard, Ma, Jianxin, Bustamante, Carlos D, Schnell, Raymond J, Main, Dorrie, Gilbert, Don, Parida, Laxmi, Kuhn, David N
Published in Genome biology (07.10.2013)
Published in Genome biology (07.10.2013)
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Journal Article
Assessing microsatellite linkage disequilibrium in wild, cultivated, and mapping populations of Theobroma cacao L. and its impact on association mapping
Stack, J. Conrad, Royaert, Stefan, Gutiérrez, Osman, Nagai, Chifumi, Holanda, Ioná Santos Araújo, Schnell, Raymond, Motamayor, Juan-Carlos
Published in Tree genetics & genomes (01.04.2015)
Published in Tree genetics & genomes (01.04.2015)
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Journal Article
Optimization of a SNP assay for genotyping Theobroma cacao under field conditions
Livingstone, Donald S. III, Freeman, Barbie, Motamayor, Juan Carlos, Schnell, Raymond J, Royaert, Stefan, Takrama, Jemmy, Meerow, Alan W, Kuhn, David N
Published in Molecular breeding (01.06.2012)
Published in Molecular breeding (01.06.2012)
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Journal Article
Identification of marker-trait associations for self-compatibility in a segregating mapping population of Theobroma cacao L
Royaert, Stefan, Phillips-Mora, Wilbert, Arciniegas Leal, Adriana M, Cariaga, Kathleen, Brown, James Steven, Kuhn, David N, Schnell, Raymond J, Motamayor, Juan Carlos
Published in Tree genetics & genomes (01.12.2011)
Published in Tree genetics & genomes (01.12.2011)
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