Progress in Ion Torrent semiconductor chip based sequencing
Merriman, Barry, R&D Team, Ion Torrent, Rothberg, Jonathan M.
Published in Electrophoresis (01.12.2012)
Published in Electrophoresis (01.12.2012)
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Journal Article
Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology
Mellmann, Alexander, Harmsen, Dag, Cummings, Craig A, Zentz, Emily B, Leopold, Shana R, Rico, Alain, Prior, Karola, Szczepanowski, Rafael, Ji, Yongmei, Zhang, Wenlan, McLaughlin, Stephen F, Henkhaus, John K, Leopold, Benjamin, Bielaszewska, Martina, Prager, Rita, Brzoska, Pius M, Moore, Richard L, Guenther, Simone, Rothberg, Jonathan M, Karch, Helge
Published in PloS one (20.07.2011)
Published in PloS one (20.07.2011)
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Journal Article
Droplet microfluidic technology for single-cell high-throughput screening
Brouzes, Eric, Medkova, Martina, Savenelli, Neal, Marran, Dave, Twardowski, Mariusz, Hutchison, J. Brian, Rothberg, Jonathan M, Link, Darren R, Perrimon, Norbert, Samuels, Michael L
Published in Proceedings of the National Academy of Sciences - PNAS (25.08.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (25.08.2009)
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Journal Article
Impaired Mitochondrial Dynamics and Mitophagy in Neuronal Models of Tuberous Sclerosis Complex
Ebrahimi-Fakhari, Darius, Saffari, Afshin, Wahlster, Lara, Di Nardo, Alessia, Turner, Daria, Lewis, Tommy L., Conrad, Christopher, Rothberg, Jonathan M., Lipton, Jonathan O., Kölker, Stefan, Hoffmann, Georg F., Han, Min-Joon, Polleux, Franck, Sahin, Mustafa
Published in Cell reports (Cambridge) (18.10.2016)
Published in Cell reports (Cambridge) (18.10.2016)
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Journal Article
Ultrasound-on-chip platform for medical imaging, analysis, and collective intelligence
Rothberg, Jonathan M., Ralston, Tyler S., Rothberg, Alex G., Martin, John, Zahorian, Jaime S., Alie, Susan A., Sanchez, Nevada J., Chen, Kailiang, Chen, Chao, Thiele, Karl, Grosjean, David, Yang, Jungwook, Bao, Liewei, Schneider, Rob, Schaetz, Sebastian, Meyer, Christophe, Neben, Abraham, Ryan, Bob, Petrus, J. R., Lutsky, Joe, McMahill, Dan, Corteville, Gregory, Hageman, Matthew R., Miller, Larry, Fife, Keith G.
Published in Proceedings of the National Academy of Sciences - PNAS (06.07.2021)
Published in Proceedings of the National Academy of Sciences - PNAS (06.07.2021)
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Journal Article
The complete genome of an individual by massively parallel DNA sequencing
Lupski, James R, Rothberg, Jonathan M, Shen, Yufeng, Chen, Yi-Ju, Turcotte, Cynthia L, Tartaro, Karrie, Irzyk, Gerard P, Wheeler, David A, Gomes, Xavier, Yuan, Ye, Qin, Xiang, Chinault, Craig, Weinstock, George M, Song, Xing-zhi, Chen, Lei, Srinivasan, Maithreyan, He, Wen, Liu, Yue, Muzny, Donna M, Gibbs, Richard A, Niazi, Faheem, Margulies, Marcel, Roth, G. Thomas, Makhijani, Vinod, Nazareth, Lynne, McGuire, Amy, Egholm, Michael
Published in Nature (17.04.2008)
Published in Nature (17.04.2008)
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Journal Article
Low-Abundance Drug-Resistant Viral Variants in Chronically HIV-Infected, Antiretroviral Treatment–Naive Patients Significantly Impact Treatment Outcomes
Simen, Birgitte B., Simons, Jan Fredrik, Hullsiek, Katherine Huppler, Novak, Richard M., MacArthur, Rodger D., Baxter, John D., Huang, Chunli, Lubeski, Christine, Turenchalk, Gregory S., Braverman, Michael S., Desany, Brian, Rothberg, Jonathan M., Egholm, Michael
Published in The Journal of infectious diseases (01.03.2009)
Published in The Journal of infectious diseases (01.03.2009)
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Journal Article
Analysis of one million base pairs of Neanderthal DNA
Ronan, Michael T, Egholm, Michael, Paunovic, Maja, Pääbo, Svante, Green, Richard E, Ptak, Susan E, Rothberg, Jonathan M, Briggs, Adrian W, Simons, Jan F, Krause, Johannes, Du, Lei
Published in Nature (16.11.2006)
Published in Nature (16.11.2006)
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Journal Article
A Complete Neandertal Mitochondrial Genome Sequence Determined by High-Throughput Sequencing
Green, Richard E., Malaspinas, Anna-Sapfo, Krause, Johannes, Briggs, Adrian W., Johnson, Philip L.F., Uhler, Caroline, Meyer, Matthias, Good, Jeffrey M., Maricic, Tomislav, Stenzel, Udo, Prüfer, Kay, Siebauer, Michael, Burbano, Hernán A., Ronan, Michael, Rothberg, Jonathan M., Egholm, Michael, Rudan, Pavao, Brajković, Dejana, Kućan, Željko, Gušić, Ivan, Wikström, Mårten, Laakkonen, Liisa, Kelso, Janet, Slatkin, Montgomery, Pääbo, Svante
Published in Cell (08.08.2008)
Published in Cell (08.08.2008)
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Journal Article
Assessment of whole genome amplification-induced bias through high-throughput, massively parallel whole genome sequencing
Pinard, Robert, de Winter, Alex, Sarkis, Gary J, Gerstein, Mark B, Tartaro, Karrie R, Plant, Ramona N, Egholm, Michael, Rothberg, Jonathan M, Leamon, John H
Published in BMC genomics (23.08.2006)
Published in BMC genomics (23.08.2006)
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Journal Article
Gaining confidence in high-throughput protein interaction networks
Bader, Joel S, Chaudhuri, Amitabha, Rothberg, Jonathan M, Chant, John
Published in Nature biotechnology (01.01.2004)
Published in Nature biotechnology (01.01.2004)
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Journal Article
A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae
Fields, Stanley, Uetz, Peter, Giot, Loic, Cagney, Gerard, Mansfield, Traci A, Judson, Richard S, Knight, James R, Lockshon, Daniel, Narayan, Vaibhav, Srinivasan, Maithreyan, Pochart, Pascale, Qureshi-Emili, Alia, Li, Ying, Godwin, Brian, Conover, Diana, Kalbfleisch, Theodore, Vijayadamodar, Govindan, Yang, Meijia, Johnston, Mark, Rothberg, Jonathan M
Published in Nature (London) (10.02.2000)
Published in Nature (London) (10.02.2000)
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Journal Article
Impaired Mitochondrial Dynamics And Mitophagy In Neuronal Models Of Tuberous Sclerosis Complex
Ebrahimi-Fakhari, Darius, Saffari, Afshin, Wahlster, Lara, DiNardo, Alessia, Turner, Daria, Lewis, Tommy L., Conrad, Christopher, Rothberg, Jonathan M., Lipton, Jonathan O., Kölker, Stefan, Hoffmann, Georg F., Han, Min-Joon, Polleux, Franck, Sahin, Mustafa
Published in Cell reports (Cambridge) (15.11.2016)
Published in Cell reports (Cambridge) (15.11.2016)
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Journal Article
Overview: methods and applications for droplet compartmentalization of biology
Leamon, John H, Link, Darren R, Egholm, Michael, Rothberg, Jonathan M
Published in Nature methods (01.07.2006)
Published in Nature methods (01.07.2006)
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Journal Article
PDGF-D, a new protease-activated growth factor
LaRochelle, William J, Jeffers, Michael, McDonald, William F, Chillakuru, Rajeev A, Giese, Neill A, Lokker, Nathalie A, Sullivan, Carol, Boldog, Ferenc L, Yang, Meijia, Vernet, Corine, Burgess, Catherine E, Fernandes, Elma, Deegler, Lisa L, Rittman, Beth, Shimkets, Juliette, Shimkets, Richard A, Rothberg, Jonathan M, Lichenstein, Henri S
Published in Nature cell biology (01.05.2001)
Published in Nature cell biology (01.05.2001)
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Journal Article
An integrated semiconductor device enabling non―optical genome sequencing
ROTHBERG, Jonathan M, HINZ, Wolfgang, HOON, Jeremy, SIMONS, Jan F, MARRAN, David, MYERS, Jason W, DAVIDSON, John F, BRANTING, Annika, NOBILE, John R, PUC, Bernard P, LIGHT, David, CLARK, Travis A, REARICK, Todd M, HUBER, Martin, BRANCIFORTE, Jeffrey T, STONER, Isaac B, CAWLEY, Simon E, LYONS, Michael, YUTAO FU, HOMER, Nils, SEDOVA, Marina, XIN MIAO, REED, Brian, SCHULTZ, Jonathan, SABINA, Jeffrey, FEIERSTEIN, Erika, SCHORN, Michelle, ALANJARY, Mohammad, DIMALANTA, Eileen, DRESSMAN, Devin, KASINSKAS, Rachel, SOKOLSKY, Tanya, FIDANZA, Jacqueline A, NAMSARAEV, Eugeni, MILESKI, William, MCKERNAN, Kevin J, WILLIAMS, Alan, ROTH, G. Thomas, BUSTILLO, James, DAVEY, Mel, LEAMON, John H, JOHNSON, Kim, MILGREW, Mark J, EDWARDS, Matthew
Published in Nature (London) (21.07.2011)
Published in Nature (London) (21.07.2011)
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Journal Article
Massively parallel ("next-generation") DNA sequencing
Gould Rothberg, Bonnie E, Rothberg, Jonathan M
Published in Clinical chemistry (Baltimore, Md.) (01.07.2015)
Published in Clinical chemistry (Baltimore, Md.) (01.07.2015)
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Journal Article
Sensitive mutation detection in heterogeneous cancer specimens by massively parallel picoliter reactor sequencing
Meyerson, Matthew, Thomas, Roman K, Nickerson, Elizabeth, Simons, Jan F, Jänne, Pasi A, Tengs, Torstein, Yuza, Yuki, Garraway, Levi A, LaFramboise, Thomas, Lee, Jeffrey C, Shah, Kinjal, O'Neill, Keith, Sasaki, Hidefumi, Lindeman, Neal, Wong, Kwok-Kin, Borras, Ana M, Gutmann, Edward J, Dragnev, Konstantin H, DeBiasi, Ralph, Chen, Tzu-Hsiu, Glatt, Karen A, Greulich, Heidi, Desany, Brian, Lubeski, Christine K, Brockman, William, Alvarez, Pablo, Hutchison, Stephen K, Leamon, J H, Ronan, Michael T, Turenchalk, Gregory S, Egholm, Michael, Sellers, William R, Rothberg, Jonathan M
Published in Nature medicine (01.07.2006)
Published in Nature medicine (01.07.2006)
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Journal Article
34.1 An 8960-Element Ultrasound-on-Chip for Point-of-Care Ultrasound
Sanchez, Nevada, Chen, Kailiang, Chen, Chao, McMahill, Dan, Hwang, Sewook, Lutsky, Joseph, Yang, Jungwook, Bao, Liewei, Chiu, Leung Kin, Peyton, Graham, Soleimani, Hamid, Ryan, Bob, Petrus, J. R., Kook, Youn-Jae, Ralston, Tyler S., Fife, Keith G., Rothberg, Jonathan M.
Published in 2021 IEEE International Solid- State Circuits Conference (ISSCC) (13.02.2021)
Published in 2021 IEEE International Solid- State Circuits Conference (ISSCC) (13.02.2021)
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