Genome-wide analysis of local chromatin packing in Arabidopsis thaliana
Wang, Congmao, Liu, Chang, Roqueiro, Damian, Grimm, Dominik, Schwab, Rebecca, Becker, Claude, Lanz, Christa, Weigel, Detlef
Published in Genome research (01.02.2015)
Published in Genome research (01.02.2015)
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Journal Article
easyGWAS: A Cloud-Based Platform for Comparing the Results of Genome-Wide Association Studies
Grimm, Dominik G., Roqueiro, Damian, Salomé, Patrice A., Kleeberger, Stefan, Greshake, Bastian, Zhu, Wangsheng, Liu, Chang, Lippert, Christoph, Stegle, Oliver, Schölkopf, Bernhard, Weigel, Detlef, Borgwardt, Karsten M.
Published in The Plant cell (01.01.2017)
Published in The Plant cell (01.01.2017)
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Journal Article
Ensemble learning and ground-truth validation of synaptic connectivity inferred from spike trains
Donner, Christian, Bartram, Julian, Hornauer, Philipp, Kim, Taehoon, Roqueiro, Damian, Hierlemann, Andreas, Obozinski, Guillaume, Schröter, Manuel
Published in PLoS computational biology (01.04.2024)
Published in PLoS computational biology (01.04.2024)
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Journal Article
Genome-wide DNA methylation analysis predicts an epigenetic switch for GATA factor expression in endometriosis
Dyson, Matthew T, Roqueiro, Damian, Monsivais, Diana, Ercan, C Mutlu, Pavone, Mary Ellen, Brooks, David C, Kakinuma, Toshiyuki, Ono, Masanori, Jafari, Nadereh, Dai, Yang, Bulun, Serdar E
Published in PLoS genetics (01.03.2014)
Published in PLoS genetics (01.03.2014)
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Journal Article
CASMAP: detection of statistically significant combinations of SNPs in association mapping
Llinares-López, Felipe, Papaxanthos, Laetitia, Roqueiro, Damian, Bodenham, Dean, Borgwardt, Karsten
Published in Bioinformatics (01.08.2019)
Published in Bioinformatics (01.08.2019)
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Journal Article
Genetic and epigenetic changes in the eutopic endometrium of women with endometriosis: association with decreased endometrial αvβ3 integrin expression
Joshi, Niraj R, Kohan-Ghadr, Hamid-Reza, Roqueiro, Damian S, Yoo, Jung Yoon, Fru, Karenne, Hestermann, Eli, Yuan, Lingwen, Ho, Shuk-Mei, Jeong, Jae-Wook, Young, Steven L, Lessey, Bruce A, Fazleabas, Asgerally T
Published in Molecular human reproduction (29.05.2021)
Published in Molecular human reproduction (29.05.2021)
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Journal Article
Kernel conditional clustering and kernel conditional semi-supervised learning
He, Xiao, Gumbsch, Thomas, Roqueiro, Damian, Borgwardt, Karsten
Published in Knowledge and information systems (01.03.2020)
Published in Knowledge and information systems (01.03.2020)
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Journal Article
Notch1 mediates uterine stromal differentiation and is critical for complete decidualization in the mouse
Afshar, Yalda, Jeong, Jae-Wook, Roqueiro, Damian, DeMayo, Franco, Lydon, John, Radtke, Freddy, Radnor, Rachel, Miele, Lucio, Fazleabas, Asgerally
Published in The FASEB journal (01.01.2012)
Published in The FASEB journal (01.01.2012)
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Journal Article
Predicting in vitro single-neuron firing rates upon pharmacological perturbation using Graph Neural Networks
Kim, Taehoon, Chen, Dexiong, Hornauer, Philipp, Emmenegger, Vishalini, Bartram, Julian, Ronchi, Silvia, Hierlemann, Andreas, Schröter, Manuel, Roqueiro, Damian
Published in Frontiers in neuroinformatics (11.01.2023)
Published in Frontiers in neuroinformatics (11.01.2023)
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Journal Article
Genome-wide progesterone receptor binding: cell type-specific and shared mechanisms in T47D breast cancer cells and primary leiomyoma cells
Yin, Ping, Roqueiro, Damian, Huang, Lei, Owen, Jonas K, Xie, Anna, Navarro, Antonia, Monsivais, Diana, Coon, 5th, John S, Kim, J Julie, Dai, Yang, Bulun, Serdar E
Published in PloS one (17.01.2012)
Published in PloS one (17.01.2012)
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Journal Article
Association mapping in biomedical time series via statistically significant shapelet mining
Bock, Christian, Gumbsch, Thomas, Moor, Michael, Rieck, Bastian, Roqueiro, Damian, Borgwardt, Karsten
Published in Bioinformatics (01.07.2018)
Published in Bioinformatics (01.07.2018)
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Journal Article
Spatial and single-cell transcriptomics provide insights into the complex inflammatory cell network in atopic dermatitis
Mitamura, Yasutaka, Reiger, Matthias, Kim, Juno, Xiao, Yi, Zhakparov, Damir, Bärenfaller, Katja, Brunner, Patrick M., Roqueiro, Damian, Traidl-Hoffmannn, Claudia, Akdis, Cezmi
Published in Journal of allergy and clinical immunology (01.02.2023)
Published in Journal of allergy and clinical immunology (01.02.2023)
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Journal Article
Genome-wide genetic heterogeneity discovery with categorical covariates
Llinares-López, Felipe, Papaxanthos, Laetitia, Bodenham, Dean, Roqueiro, Damian, Borgwardt, Karsten
Published in Bioinformatics (Oxford, England) (15.06.2017)
Published in Bioinformatics (Oxford, England) (15.06.2017)
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Journal Article
Spatial transcriptomics combined with single‐cell RNA‐sequencing unravels the complex inflammatory cell network in atopic dermatitis
Mitamura, Yasutaka, Reiger, Matthias, Kim, Juno, Xiao, Yi, Zhakparov, Damir, Tan, Ge, Rückert, Beate, Rinaldi, Arturo O., Baerenfaller, Katja, Akdis, Mübeccel, Brüggen, Marie‐Charlotte, Nadeau, Kari C., Brunner, Patrick M., Roqueiro, Damian, Traidl‐Hoffmann, Claudia, Akdis, Cezmi A.
Published in Allergy (Copenhagen) (01.08.2023)
Published in Allergy (Copenhagen) (01.08.2023)
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Journal Article
SigMod: an exact and efficient method to identify a strongly interconnected disease-associated module in a gene network
Liu, Yuanlong, Brossard, Myriam, Roqueiro, Damian, Margaritte-Jeannin, Patricia, Sarnowski, Chloé, Bouzigon, Emmanuelle, Demenais, Florence
Published in Bioinformatics (Oxford, England) (15.05.2017)
Published in Bioinformatics (Oxford, England) (15.05.2017)
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Journal Article
Changes in Eutopic Endometrial Gene Expression During the Progression of Experimental Endometriosis in the Baboon, Papio Anubis
AFSHAR, Yalda, HASTINGS, Julie, ROQUEIRO, Damian, JEONG, Jae-Wook, GIUDICE, Linda C, FAZLEABAS, Asgerally T
Published in Biology of reproduction (01.02.2013)
Published in Biology of reproduction (01.02.2013)
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Journal Article
DeePhys: A machine learning–assisted platform for electrophysiological phenotyping of human neuronal networks
Hornauer, Philipp, Prack, Gustavo, Anastasi, Nadia, Ronchi, Silvia, Kim, Taehoon, Donner, Christian, Fiscella, Michele, Borgwardt, Karsten, Taylor, Verdon, Jagasia, Ravi, Roqueiro, Damian, Hierlemann, Andreas, Schröter, Manuel
Published in Stem cell reports (13.02.2024)
Published in Stem cell reports (13.02.2024)
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Journal Article