Genetic manipulation of lignin reduces recalcitrance and improves ethanol production from switchgrass
Fu, Chunxiang, Mielenz, Jonathan R, Xiao, Xirong, Ge, Yaxin, Hamilton, Choo Y, Rodriguez, Miguel Jr, Chen, Fang, Foston, Marcus, Ragauskas, Arthur, Bouton, Joseph, Dixon, Richard A, Wang, Zeng-Yu
Published in Proceedings of the National Academy of Sciences - PNAS (01.03.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (01.03.2011)
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Journal Article
Mutant alcohol dehydrogenase leads to improved ethanol tolerance in Clostridium thermocellum
Brown, Steven D., Guss, Adam M., Karpinets, Tatiana V., Parks, Jerry M., Smolin, Nikolai, Yang, Shihui, Land, Miriam L., Klingeman, Dawn M., Bhandiwad, Ashwini, Rodriguez, Miguel, Raman, Babu, Shao, Xiongjun, Mielenz, Jonathan R., Smith, Jeremy C., Keller, Martin, Lynd, Lee R.
Published in Proceedings of the National Academy of Sciences - PNAS (16.08.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (16.08.2011)
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Journal Article
Specialized activities and expression differences for Clostridium thermocellum biofilm and planktonic cells
Dumitrache, Alexandru, Klingeman, Dawn M., Natzke, Jace, Rodriguez Jr, Miguel, Giannone, Richard J., Hettich, Robert L., Davison, Brian H., Brown, Steven D.
Published in Scientific reports (27.02.2017)
Published in Scientific reports (27.02.2017)
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Journal Article
Use of Label-Free Quantitative Proteomics To Distinguish the Secreted Cellulolytic Systems of Caldicellulosiruptor bescii and Caldicellulosiruptor obsidiansis
LOCHNER, Adriane, GIANNONE, Richard J, RODRIGUEZ, Miguel, SHAH, Manesh B, MIELENZ, Jonathan R, KELLER, Martin, ANTRANIKIAN, Garabed, GRAHAM, David E, HETTICH, Robert L
Published in Applied and Environmental Microbiology (01.06.2011)
Published in Applied and Environmental Microbiology (01.06.2011)
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Journal Article
Biomass formation and sugar release efficiency of Populus modified by altered expression of a NAC transcription factor
Payyavula, Raja S., Badmi, Raghuram, Jawdy, Sara S., Rodriguez, Miguel, Gunter, Lee, Sykes, Robert W., Winkeler, Kimberly A., Collins, Cassandra M., Rottmann, William H., Chen, Jin‐Gui, Yang, Xiaohan, Tuskan, Gerald A, Kalluri, Udaya C.
Published in Plant direct (01.08.2022)
Published in Plant direct (01.08.2022)
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Journal Article
Hemicellulose–Cellulose Composites Reveal Differences in Cellulose Organization after Dilute Acid Pretreatment
Shah, Riddhi, Huang, Shixin, Pingali, Sai Venkatesh, Sawada, Daisuke, Pu, Yunqiao, Rodriguez, Miguel, Ragauskas, Arthur J, Kim, Seong H, Evans, Barbara R, Davison, Brian H, O’Neill, Hugh
Published in Biomacromolecules (11.02.2019)
Published in Biomacromolecules (11.02.2019)
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Journal Article
Combined inactivation of the Clostridium cellulolyticum lactate and malate dehydrogenase genes substantially increases ethanol yield from cellulose and switchgrass fermentations
Li, Yongchao, Tschaplinski, Timothy J, Engle, Nancy L, Hamilton, Choo Y, Rodriguez, Miguel Jr, Liao, James C, Schadt, Christopher W, Guss, Adam M, Yang, Yunfeng, Graham, David E
Published in Biotechnology for biofuels (04.01.2012)
Published in Biotechnology for biofuels (04.01.2012)
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Journal Article
Contribution of Microorganisms with the Clade II Nitrous Oxide Reductase to Suppression of Surface Emissions of Nitrous Oxide
Hunt, Kristopher A., Carr, Alex V., Otwell, Anne E., Valenzuela, Jacob J., Walker, Kathleen S., Dixon, Emma R., Lui, Lauren M., Nielsen, Torben N., Bowman, Samuel, von Netzer, Frederick, Moon, Ji-Won, Schadt, Christopher W., Rodriguez Jr, Miguel, Lowe, Kenneth, Joyner, Dominique, Davis, Katherine J., Wu, Xiaoqin, Chakraborty, Romy, Fields, Matthew W., Zhou, Jizhong, Hazen, Terry C., Arkin, Adam P., Wankel, Scott D., Baliga, Nitin S., Stahl, David A.
Published in Environmental science & technology (23.04.2024)
Published in Environmental science & technology (23.04.2024)
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Journal Article
Impact of Pretreated Switchgrass and Biomass Carbohydrates on Clostridium thermocellum ATCC 27405 Cellulosome Composition: A Quantitative Proteomic Analysis
Raman, Babu, Pan, Chongle, Hurst, Gregory B, Rodriguez, Miguel Jr, McKeown, Catherine K, Lankford, Patricia K, Samatova, Nagiza F, Mielenz, Jonathan R
Published in PloS one (22.04.2009)
Published in PloS one (22.04.2009)
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Journal Article
Two‐year field analysis of reduced recalcitrance transgenic switchgrass
Baxter, Holly L, Mazarei, Mitra, Labbe, Nicole, Kline, Lindsey M, Cheng, Qunkang, Windham, Mark T, Mann, David G. J, Fu, Chunxiang, Ziebell, Angela, Sykes, Robert W, Rodriguez, Miguel, Jr, Davis, Mark F, Mielenz, Jonathan R, Dixon, Richard A, Wang, Zeng‐Yu, Stewart, C. Neal, Jr
Published in Plant biotechnology journal (01.09.2014)
Published in Plant biotechnology journal (01.09.2014)
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Journal Article
Simultaneous saccharification and fermentation and a consolidated bioprocessing for Hinoki cypress and Eucalyptus after fibrillation by steam and subsequent wet-disk milling
Kumagai, Akio, Kawamura, Shunsuke, Lee, Seung-Hwan, Endo, Takashi, Rodriguez, Miguel, Mielenz, Jonathan R.
Published in Bioresource technology (01.06.2014)
Published in Bioresource technology (01.06.2014)
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Journal Article
Transcriptomic analysis of Clostridium thermocellum ATCC 27405 cellulose fermentation
Raman, Babu, McKeown, Catherine K, Rodriguez, Jr, Miguel, Brown, Steven D, Mielenz, Jonathan R
Published in BMC microbiology (14.06.2011)
Published in BMC microbiology (14.06.2011)
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Journal Article
Consolidated bioprocessing of transgenic switchgrass by an engineered and evolved Clostridium thermocellum strain
Yee, Kelsey L, Rodriguez Jr, Miguel, Thompson, Olivia A, Fu, Chunxiang, Wang, Zeng-Yu, Davison, Brian H, Mielenz, Jonathan R
Published in Biotechnology for biofuels (2014)
Published in Biotechnology for biofuels (2014)
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Journal Article
Global transcriptome analysis of Clostridium thermocellum ATCC 27405 during growth on dilute acid pretreated Populus and switchgrass
Wilson, Charlotte M, Rodriguez, Miguel Jr, Johnson, Courtney M, Martin, Stanton L, Chu, Tzu Ming, Wolfinger, Russ D, Hauser, Loren J, Land, Miriam L, Klingeman, Dawn M, Syed, Mustafa H, Ragauskas, Arthur J, Tschaplinski, Timothy J, Mielenz, Jonathan R, Brown, Steven D
Published in Biotechnology for biofuels (02.12.2013)
Published in Biotechnology for biofuels (02.12.2013)
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Journal Article
A New Calmodulin-Binding Protein Expresses in the Context of Secondary Cell Wall Biosynthesis and Impacts Biomass Properties in Populus
Badmi, Raghuram, Payyavula, Raja S, Bali, Garima, Guo, Hao-Bo, Jawdy, Sara S, Gunter, Lee E, Yang, Xiaohan, Winkeler, Kimberly A, Collins, Cassandra, Rottmann, William H, Yee, Kelsey, Rodriguez, Jr, Miguel, Sykes, Robert W, Decker, Stephen R, Davis, Mark F, Ragauskas, Arthur J, Tuskan, Gerald A, Kalluri, Udaya C
Published in Frontiers in plant science (05.12.2018)
Published in Frontiers in plant science (05.12.2018)
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Journal Article
Anaerobic microplate assay for direct microbial conversion of switchgrass and Avicel using Clostridium thermocellum
Oguntimein, Gbekeloluwa B., Rodriguez, Miguel, Dumitrache, Alexandru, Shollenberger, Todd, Decker, Stephen R., Davison, Brian H., Brown, Steven D.
Published in Biotechnology letters (01.02.2018)
Published in Biotechnology letters (01.02.2018)
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Journal Article
Evaluation of the bioconversion of genetically modified switchgrass using simultaneous saccharification and fermentation and a consolidated bioprocessing approach
Yee, Kelsey L, Rodriguez Jr, Miguel, Tschaplinski, Timothy J, Engle, Nancy L, Martin, Madhavi Z, Fu, Chunxiang, Wang, Zeng-Yu, Hamilton-Brehm, Scott D, Mielenz, Jonathan R
Published in Biotechnology for biofuels (12.11.2012)
Published in Biotechnology for biofuels (12.11.2012)
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Journal Article
Fungal elemental profiling unleashed through rapid laser-induced breakdown spectroscopy (LIBS)
Rush, Tomás A, Wymore, Ann M, Rodríguez, Jr, Miguel, Jawdy, Sara, Vilgalys, Rytas J, Martin, Madhavi Z, Andrews, Hunter B
Published in mSystems (17.09.2024)
Published in mSystems (17.09.2024)
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Journal Article
Clostridium thermocellum transcriptomic profiles after exposure to furfural or heat stress
Wilson, Charlotte M, Yang, Shihui, Rodriguez, Miguel Jr, Ma, Qin, Johnson, Courtney M, Dice, Lezlee, Xu, Ying, Brown, Steven D
Published in Biotechnology for biofuels (12.09.2013)
Published in Biotechnology for biofuels (12.09.2013)
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Journal Article