Conversion of the Amazon rainforest to agriculture results in biotic homogenization of soil bacterial communities
Rodrigues, Jorge L. M., Pellizari, Vivian H., Mueller, Rebecca, Baek, Kyunghwa, da C. Jesus, Ederson, Paula, Fabiana S., Mirza, Babur, Hamaoui, George S., Tsai, Siu Mui, Feigl, Brigitte, Tiedje, James M., Bohannan, Brendan J. M., Nüsslein, Klaus
Published in Proceedings of the National Academy of Sciences - PNAS (15.01.2013)
Published in Proceedings of the National Academy of Sciences - PNAS (15.01.2013)
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Journal Article
Land use change alters functional gene diversity, composition and abundance in Amazon forest soil microbial communities
Paula, Fabiana S, Rodrigues, Jorge L. M, Zhou, Jizhong, Wu, Liyou, Mueller, Rebecca C, Mirza, Babur S, Bohannan, Brendan J. M, Nüsslein, Klaus, Deng, Ye, Tiedje, James M, Pellizari, Vivian H
Published in Molecular ecology (01.06.2014)
Published in Molecular ecology (01.06.2014)
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Journal Article
Genomic and Physiological Characterization of the Verrucomicrobia Isolate Diplosphaera colitermitum gen. nov., sp. nov., Reveals Microaerophily and Nitrogen Fixation Genes
WERTZ, John T, KIM, Eunji, BREZNAK, John A, SCHMIDT, Thomas M, RODRIGUES, Jorge L. M
Published in Applied and Environmental Microbiology (01.03.2012)
Published in Applied and Environmental Microbiology (01.03.2012)
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Journal Article
Distinct Biogeographic Patterns for Archaea, Bacteria, and Fungi along the Vegetation Gradient at the Continental Scale in Eastern China
Ma, Bin, Dai, Zhongmin, Wang, Haizhen, Dsouza, Melissa, Liu, Xingmei, He, Yan, Wu, Jianjun, Rodrigues, Jorge L M, Gilbert, Jack A, Brookes, Philip C, Xu, Jianming
Published in mSystems (01.01.2017)
Published in mSystems (01.01.2017)
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Journal Article
DNA-Stable Isotope Probing Integrated with Metagenomics for Retrieval of Biphenyl Dioxygenase Genes from Polychlorinated Biphenyl-Contaminated River Sediment
Sul, Woo Jun, Park, Joonhong, Quensen, John F. III, Rodrigues, Jorge L.M, Seliger, Laurie, Tsoi, Tamara V, Zylstra, Gerben J, Tiedje, James M
Published in Applied and Environmental Microbiology (01.09.2009)
Published in Applied and Environmental Microbiology (01.09.2009)
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Journal Article
Comparative Systems Biology across an Evolutionary Gradient within the Shewanella Genus
Konstantinidis, Konstantinos T., Serres, Margrethe H., Romine, Margaret F., Rodrigues, Jorge L M., Auchtung, Jennifer, McCue, Lee-Ann, Lipton, Mary S., Obraztsova, Anna, Giometti, Carol S., Nealson, Kenneth H., Fredrickson, James K., Tiedje, James M., Gordon, Jeffrey I.
Published in Proceedings of the National Academy of Sciences - PNAS (15.09.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (15.09.2009)
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Journal Article
Stability, genotypic and phenotypic diversity of Shewanella baltica in the redox transition zone of the Baltic Sea
Deng, Jie, Brettar, Ingrid, Luo, Chengwei, Auchtung, Jennifer, Konstantinidis, Konstantinos T, Rodrigues, Jorge L. M, Höfle, Manfred, Tiedje, James M
Published in Environmental microbiology (01.06.2014)
Published in Environmental microbiology (01.06.2014)
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Journal Article
Large-Scale Comparative Phenotypic and Genomic Analyses Reveal Ecological Preferences of Shewanella Species and Identify Metabolic Pathways Conserved at the Genus Level
RODRIGUES, Jorge L. M, SERRES, Margrethe H, TIEDJE, James M
Published in Applied and Environmental Microbiology (01.08.2011)
Published in Applied and Environmental Microbiology (01.08.2011)
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Journal Article
Degradation of Aroclor 1242 Dechlorination Products in Sediments by Burkholderia xenovorans LB400(ohb) and Rhodococcus sp. Strain RHA1(fcb)
Rodrigues, Jorge L. M, Kachel, C. Alan, Aiello, Michael R, Quensen, John F, Maltseva, Olga V, Tsoi, Tamara V, Tiedje, James M
Published in Applied and Environmental Microbiology (01.04.2006)
Published in Applied and Environmental Microbiology (01.04.2006)
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Journal Article
Burkholderia pseudomallei-absent soil bacterial community results in secondary metabolites that kill this pathogen
Potisap, Chotima, Khan, Md Abdul Wadud, Boonmee, Atcha, Rodrigues, Jorge L. M., Wongratanacheewin, Surasakdi, Sermswan, Rasana W.
Published in AMB Express (24.08.2018)
Published in AMB Express (24.08.2018)
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Journal Article
High-Quality Draft Genome Sequence of the Opitutaceae Bacterium Strain TAV1, a Symbiont of the Wood-Feeding Termite Reticulitermes flavipes
Isanapong, Jantiya, Goodwin, Lynne, Bruce, David, Chen, Amy, Detter, Chris, Han, James, Han, Cliff S, Held, Brittany, Huntemann, Marcel, Ivanova, Natalia, Land, Miriam L, Mavromatis, Konstantinos, Nolan, Matt, Pati, Amrita, Pennacchio, Len, Pitluck, Sam, Szeto, Ernest, Tapia, Roxanne, Woyke, Tanja, Rodrigues, Jorge L. M
Published in Journal of Bacteriology (01.05.2012)
Published in Journal of Bacteriology (01.05.2012)
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Journal Article
Bacterial Communities in the Rhizosphere of Biofuel Crops Grown on Marginal Lands as Evaluated by 16S rRNA Gene Pyrosequences
da C. Jesus, Ederson, Susilawati, Endang, Smith, Stephanie L, Wang, Qiong, Chai, Benli, Farris, Ryan, Rodrigues, Jorge L. M, Thelen, Kurt D, Tiedje, James M
Published in Bioenergy research (01.03.2010)
Published in Bioenergy research (01.03.2010)
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Journal Article
Cloning, expression, and characterization of a peptidoglycan hydrolase from the Burkholderia pseudomallei phage ST79
Khakhum, Nittaya, Yordpratum, Umaporn, Boonmee, Atcha, Tattawasart, Unchalee, Rodrigues, Jorge L. M., Sermswan, Rasana W.
Published in AMB Express (15.09.2016)
Published in AMB Express (15.09.2016)
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Journal Article
Phylogenetic Characterization and Prevalence of "Spirobacillus cienkowskii," a Red-Pigmented, Spiral-Shaped Bacterial Pathogen of Freshwater Daphnia Species
Rodrigues, Jorge L.M, Duffy, Meghan A, Tessier, Alan J, Ebert, Dieter, Mouton, Laurence, Schmidt, Thomas M
Published in Applied and Environmental Microbiology (01.03.2008)
Published in Applied and Environmental Microbiology (01.03.2008)
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Journal Article
New Biological Insights Into How Deforestation in Amazonia Affects Soil Microbial Communities Using Metagenomics and Metagenome-Assembled Genomes
Kroeger, Marie E, Delmont, Tom O, Eren, A M, Meyer, Kyle M, Guo, Jiarong, Khan, Kiran, Rodrigues, Jorge L M, Bohannan, Brendan J M, Tringe, Susannah G, Borges, Clovis D, Tiedje, James M, Tsai, Siu M, Nüsslein, Klaus
Published in Frontiers in microbiology (23.07.2018)
Published in Frontiers in microbiology (23.07.2018)
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Journal Article
Conversion of Amazon rainforest to agriculture alters community traits of methane‐cycling organisms
Meyer, Kyle M., Klein, Ann M., Rodrigues, Jorge L. M., Nüsslein, Klaus, Tringe, Susannah G., Mirza, Babur S., Tiedje, James M., Bohannan, Brendan J. M.
Published in Molecular ecology (01.03.2017)
Published in Molecular ecology (01.03.2017)
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Journal Article