Genomic Selection in Plant Breeding: Methods, Models, and Perspectives
Crossa, José, Pérez-Rodríguez, Paulino, Cuevas, Jaime, Montesinos-López, Osval, Jarquín, Diego, de los Campos, Gustavo, Burgueño, Juan, González-Camacho, Juan M., Pérez-Elizalde, Sergio, Beyene, Yoseph, Dreisigacker, Susanne, Singh, Ravi, Zhang, Xuecai, Gowda, Manje, Roorkiwal, Manish, Rutkoski, Jessica, Varshney, Rajeev K.
Published in Trends in plant science (01.11.2017)
Published in Trends in plant science (01.11.2017)
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Journal Article
Applications of Machine Learning Methods to Genomic Selection in Breeding Wheat for Rust Resistance
González‐Camacho, Juan Manuel, Ornella, Leonardo, Pérez‐Rodríguez, Paulino, Gianola, Daniel, Dreisigacker, Susanne, Crossa, José
Published in The plant genome (01.07.2018)
Published in The plant genome (01.07.2018)
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Journal Article
A review of deep learning applications for genomic selection
Montesinos-López, Osval Antonio, Montesinos-López, Abelardo, Pérez-Rodríguez, Paulino, Barrón-López, José Alberto, Martini, Johannes W R, Fajardo-Flores, Silvia Berenice, Gaytan-Lugo, Laura S, Santana-Mancilla, Pedro C, Crossa, José
Published in BMC genomics (06.01.2021)
Published in BMC genomics (06.01.2021)
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Journal Article
META-R: A software to analyze data from multi-environment plant breeding trials
Alvarado, Gregorio, Rodríguez, Francisco M., Pacheco, Angela, Burgueño, Juan, Crossa, José, Vargas, Mateo, Pérez-Rodríguez, Paulino, Lopez-Cruz, Marco A.
Published in The Crop journal (01.10.2020)
Published in The Crop journal (01.10.2020)
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Journal Article
Hybrid Wheat Prediction Using Genomic, Pedigree, and Environmental Covariables Interaction Models
Basnet, Bhoja Raj, Crossa, Jose, Dreisigacker, Susanne, Pérez‐Rodríguez, Paulino, Manes, Yann, Singh, Ravi P., Rosyara, Umesh R., Camarillo‐Castillo, Fatima, Murua, Mercedes
Published in The plant genome (01.03.2019)
Published in The plant genome (01.03.2019)
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Journal Article
Maize responsiveness to Azospirillum brasilense: Insights into genetic control, heterosis and genomic prediction
Vidotti, Miriam Suzane, Matias, Filipe Inácio, Alves, Filipe Couto, Pérez-Rodríguez, Paulino, Beltran, Gregório Alvarado, Burgueño, Juan, Crossa, José, Fritsche-Neto, Roberto
Published in PloS one (07.06.2019)
Published in PloS one (07.06.2019)
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Journal Article
Genomic prediction across years in a maize doubled haploid breeding program to accelerate early-stage testcross testing
Wang, Nan, Wang, Hui, Zhang, Ao, Liu, Yubo, Yu, Diansi, Hao, Zhuanfang, Ilut, Dan, Glaubitz, Jeffrey C., Gao, Yanxin, Jones, Elizabeth, Olsen, Michael, Li, Xinhai, San Vicente, Felix, Prasanna, Boddupalli M., Crossa, Jose, Pérez-Rodríguez, Paulino, Zhang, Xuecai
Published in Theoretical and applied genetics (01.10.2020)
Published in Theoretical and applied genetics (01.10.2020)
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Journal Article
Genomic Prediction of Genotype × Environment Interaction Kernel Regression Models
Cuevas, Jaime, Crossa, José, Soberanis, Víctor, Pérez‐Elizalde, Sergio, Pérez‐Rodríguez, Paulino, Campos, Gustavo de los, Montesinos‐López, O. A., Burgueño, Juan
Published in The plant genome (01.11.2016)
Published in The plant genome (01.11.2016)
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Journal Article
Prospects and Challenges of Applied Genomic Selection—A New Paradigm in Breeding for Grain Yield in Bread Wheat
Juliana, Philomin, Singh, Ravi P., Poland, Jesse, Mondal, Suchismita, Crossa, José, Montesinos‐López, Osval A., Dreisigacker, Susanne, Pérez‐Rodríguez, Paulino, Huerta‐Espino, Julio, Crespo‐Herrera, Leonardo, Govindan, Velu
Published in The plant genome (01.11.2018)
Published in The plant genome (01.11.2018)
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Journal Article
Empirical Comparison of Tropical Maize Hybrids Selected Through Genomic and Phenotypic Selections
Beyene, Yoseph, Gowda, Manje, Olsen, Michael, Robbins, Kelly R, Pérez-Rodríguez, Paulino, Alvarado, Gregorio, Dreher, Kate, Gao, Star Yanxin, Mugo, Stephen, Prasanna, Boddupalli M, Crossa, Jose
Published in Frontiers in plant science (22.11.2019)
Published in Frontiers in plant science (22.11.2019)
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Journal Article
Target Population of Environments for Wheat Breeding in India: Definition, Prediction and Genetic Gains
Crespo-Herrera, Leonardo Abdiel, Crossa, Jose, Huerta-Espino, Julio, Mondal, Suchismita, Velu, Govindan, Juliana, Philomin, Vargas, Mateo, Pérez-Rodríguez, Paulino, Joshi, Arun Kumar, Braun, Hans Joachim, Singh, Ravi Prakash
Published in Frontiers in plant science (24.05.2021)
Published in Frontiers in plant science (24.05.2021)
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Journal Article
Deep Kernel and Deep Learning for Genome-Based Prediction of Single Traits in Multienvironment Breeding Trials
Crossa, José, Martini, Johannes W R, Gianola, Daniel, Pérez-Rodríguez, Paulino, Jarquin, Diego, Juliana, Philomin, Montesinos-López, Osval, Cuevas, Jaime
Published in Frontiers in genetics (09.12.2019)
Published in Frontiers in genetics (09.12.2019)
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Journal Article
Application of Genomic Selection at the Early Stage of Breeding Pipeline in Tropical Maize
Beyene, Yoseph, Gowda, Manje, Pérez-Rodríguez, Paulino, Olsen, Michael, Robbins, Kelly R, Burgueño, Juan, Prasanna, Boddupalli M, Crossa, Jose
Published in Frontiers in plant science (28.06.2021)
Published in Frontiers in plant science (28.06.2021)
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Journal Article
Comparison between linear and non-parametric regression models for genome-enabled prediction in wheat
Pérez-Rodríguez, Paulino, Gianola, Daniel, González-Camacho, Juan Manuel, Crossa, José, Manès, Yann, Dreisigacker, Susanne
Published in G3 : genes - genomes - genetics (01.12.2012)
Published in G3 : genes - genomes - genetics (01.12.2012)
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Journal Article
Partial least squares enhance multi-trait genomic prediction of potato cultivars in new environments
Ortiz, Rodomiro, Reslow, Fredrik, Montesinos-López, Abelardo, Huicho, José, Pérez-Rodríguez, Paulino, Montesinos-López, Osval A., Crossa, José
Published in Scientific reports (19.06.2023)
Published in Scientific reports (19.06.2023)
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Journal Article
Rapid Cycling Genomic Selection in a Multiparental Tropical Maize Population
Zhang, Xuecai, Pérez-Rodríguez, Paulino, Burgueño, Juan, Olsen, Michael, Buckler, Edward, Atlin, Gary, Prasanna, Boddupalli M, Vargas, Mateo, San Vicente, Félix, Crossa, José
Published in G3 : genes - genomes - genetics (01.07.2017)
Published in G3 : genes - genomes - genetics (01.07.2017)
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Journal Article
Genomic Prediction of Gene Bank Wheat Landraces
Crossa, José, Jarquín, Diego, Franco, Jorge, Pérez-Rodríguez, Paulino, Burgueño, Juan, Saint-Pierre, Carolina, Vikram, Prashant, Sansaloni, Carolina, Petroli, Cesar, Akdemir, Deniz, Sneller, Clay, Reynolds, Matthew, Tattaris, Maria, Payne, Thomas, Guzman, Carlos, Peña, Roberto J, Wenzl, Peter, Singh, Sukhwinder
Published in G3 : genes - genomes - genetics (01.07.2016)
Published in G3 : genes - genomes - genetics (01.07.2016)
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Journal Article
Deep Kernel for Genomic and Near Infrared Predictions in Multi-environment Breeding Trials
Cuevas, Jaime, Montesinos-López, Osval, Juliana, Philomin, Guzmán, Carlos, Pérez-Rodríguez, Paulino, González-Bucio, José, Burgueño, Juan, Montesinos-López, Abelardo, Crossa, José
Published in G3 : genes - genomes - genetics (01.09.2019)
Published in G3 : genes - genomes - genetics (01.09.2019)
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Journal Article