Bastion6: a bioinformatics approach for accurate prediction of type VI secreted effectors
Wang, Jiawei, Yang, Bingjiao, Leier, André, Marquez-Lago, Tatiana T, Hayashida, Morihiro, Rocker, Andrea, Zhang, Yanju, Akutsu, Tatsuya, Chou, Kuo-Chen, Strugnell, Richard A, Song, Jiangning, Lithgow, Trevor
Published in Bioinformatics (01.08.2018)
Published in Bioinformatics (01.08.2018)
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Journal Article
The expression of virulence genes increases membrane permeability and sensitivity to envelope stress in Salmonella Typhimurium
Sobota, Malgorzata, Rodilla Ramirez, Pilar Natalia, Cambré, Alexander, Rocker, Andrea, Mortier, Julien, Gervais, Théo, Haas, Tiphaine, Cornillet, Delphine, Chauvin, Dany, Hug, Isabelle, Julou, Thomas, Aertsen, Abram, Diard, Médéric
Published in PLoS biology (07.04.2022)
Published in PLoS biology (07.04.2022)
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Journal Article
Impact of horizontal gene transfer on emergence and stability of cooperative virulence in Salmonella Typhimurium
Bakkeren, Erik, Gül, Ersin, Huisman, Jana S., Steiger, Yves, Rocker, Andrea, Hardt, Wolf-Dietrich, Diard, Médéric
Published in Nature communications (11.04.2022)
Published in Nature communications (11.04.2022)
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Journal Article
Global Trends in Proteome Remodeling of the Outer Membrane Modulate Antimicrobial Permeability in Klebsiella pneumoniae
Rocker, Andrea, Lacey, Jake A, Belousoff, Matthew J, Wilksch, Jonathan J, Strugnell, Richard A, Davies, Mark R, Lithgow, Trevor
Published in mBio (14.04.2020)
Published in mBio (14.04.2020)
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Journal Article
Nucleosome accessibility governed by the dimer/tetramer interface
Böhm, Vera, Hieb, Aaron R, Andrews, Andrew J, Gansen, Alexander, Rocker, Andrea, Tóth, Katalin, Luger, Karolin, Langowski, Jörg
Published in Nucleic acids research (01.04.2011)
Published in Nucleic acids research (01.04.2011)
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Journal Article
An Outbreak of Carbapenem-Resistant and Hypervirulent Klebsiella pneumoniae in an Intensive Care Unit of a Major Teaching Hospital in Wenzhou, China
Zhao, Yajie, Zhang, Xiucai, Torres, Von Vergel L., Liu, Haiyang, Rocker, Andrea, Zhang, Yizhi, Wang, Jiawei, Chen, Lijiang, Bi, Wenzi, Lin, Jie, Strugnell, Richard A., Zhang, Siqin, Lithgow, Trevor, Zhou, Tieli, Cao, Jianming
Published in Frontiers in public health (19.08.2019)
Published in Frontiers in public health (19.08.2019)
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Journal Article
The evolutionary mechanism of non-carbapenemase carbapenem-resistant phenotypes in Klebsiella spp
Rosas, Natalia C, Wilksch, Jonathan, Barber, Jake, Li, Jiahui, Wang, Yanan, Sun, Zhewei, Rocker, Andrea, Webb, Chaille T, Perlaza-Jiménez, Laura, Stubenrauch, Christopher J, Dhanasekaran, Vijaykrishna, Song, Jiangning, Taiaroa, George, Davies, Mark, Strugnell, Richard A, Bao, Qiyu, Zhou, Tieli, McDonald, Michael J, Lithgow, Trevor
Published in eLife (06.07.2023)
Published in eLife (06.07.2023)
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Journal Article
Component Parts of Bacteriophage Virions Accurately Defined by a Machine-Learning Approach Built on Evolutionary Features
Thung, Tze Y, White, Murray E, Dai, Wei, Wilksch, Jonathan J, Bamert, Rebecca S, Rocker, Andrea, Stubenrauch, Christopher J, Williams, Daniel, Huang, Cheng, Schittelhelm, Ralf, Barr, Jeremy J, Jameson, Eleanor, McGowan, Sheena, Zhang, Yanju, Wang, Jiawei, Dunstan, Rhys A, Lithgow, Trevor
Published in mSystems (01.06.2021)
Published in mSystems (01.06.2021)
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Journal Article
Type II toxin: antitoxin systems. More than small selfish entities?
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Journal Article
Book Review
Forensic genomics of a novel Klebsiella quasipneumoniae type from a neonatal intensive care unit in China reveals patterns of colonization, evolution and epidemiology
Perlaza-Jiménez, Laura, Wu, Qing, Torres, Von Vergel L, Zhang, Xiaoxiao, Li, Jiahui, Rocker, Andrea, Lithgow, Trevor, Zhou, Tieli, Vijaykrishna, Dhanasekaran
Published in Microbial genomics (01.10.2020)
Published in Microbial genomics (01.10.2020)
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Journal Article
Dynamic Epidemiology and Virulence Characteristics of Carbapenem-Resistant Klebsiella pneumoniae in Wenzhou, China from 2003 to 2016
Zhao, Yajie, Zhang, Siqin, Fang, Renchi, Wu, Qing, Li, Jiahui, Zhang, Yizhi, Rocker, Andrea, Cao, Jianming, Lithgow, Trevor, Zhou, Tieli
Published in Infection and drug resistance (01.01.2020)
Published in Infection and drug resistance (01.01.2020)
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Journal Article
A rationally designed oral vaccine induces immunoglobulin A in the murine gut that directs the evolution of attenuated Salmonella variants
Diard, Médéric, Bakkeren, Erik, Lentsch, Verena, Rocker, Andrea, Bekele, Nahimi Amare, Hoces, Daniel, Aslani, Selma, Arnoldini, Markus, Böhi, Flurina, Schumann-Moor, Kathrin, Adamcik, Jozef, Piccoli, Luca, Lanzavecchia, Antonio, Stadtmueller, Beth M., Donohue, Nicholas, van der Woude, Marjan W., Hockenberry, Alyson, Viollier, Patrick H., Falquet, Laurent, Wüthrich, Daniel, Bonfiglio, Ferdinando, Loverdo, Claude, Egli, Adrian, Zandomeneghi, Giorgia, Mezzenga, Raffaele, Holst, Otto, Meier, Beat H., Hardt, Wolf-Dietrich, Slack, Emma
Published in Nature microbiology (01.07.2021)
Published in Nature microbiology (01.07.2021)
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Journal Article
Nucleosome Dynamics Studied by Single Molecule FRET
Böhm, Vera, Hieb, Aaron, Andrews, Andrew, Gansen, Alexander, Rocker, Andrea, Tóth, Katalin, Luger, Karolin, Langowski, Jörg
Published in Biophysical journal (01.02.2011)
Published in Biophysical journal (01.02.2011)
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Journal Article
Phenotypic heterogeneity drives phage-bacteria coevolution in the intestinal tract
Wenner, Nicolas, Bertola, Anouk, Larsson, Louise, Rocker, Andrea, Nahimi Amare Bekele, Sauerbeck, Chris, Lemos Rocha, Leonardo F, Druelle, Valentin, Harms, Alexander, Diard, Mederic
Published in bioRxiv (09.11.2023)
Published in bioRxiv (09.11.2023)
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