Plant host and soil origin influence fungal and bacterial assemblages in the roots of woody plants
Bonito, Gregory, Reynolds, Hannah, Robeson, Michael S., II, Nelson, Jessica, Hodkinson, Brendan P, Tuskan, Gerald, Schadt, Christopher W, Vilgalys, Rytas
Published in Molecular ecology (01.07.2014)
Published in Molecular ecology (01.07.2014)
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Journal Article
Seasonal Shifts in Diet and Gut Microbiota of the American Bison (Bison bison)
Bergmann, Gaddy T, Craine, Joseph M, Robeson, 2nd, Michael S, Fierer, Noah
Published in PloS one (12.11.2015)
Published in PloS one (12.11.2015)
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Journal Article
Bioinformatics challenges for profiling the microbiome in cancer: pitfalls and opportunities
Bokulich, Nicholas A., Robeson, Michael S.
Published in Trends in microbiology (Regular ed.) (12.09.2024)
Published in Trends in microbiology (Regular ed.) (12.09.2024)
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Journal Article
Mixed ancestry from wild and domestic lineages contributes to the rapid expansion of invasive feral swine
Smyser, Timothy J., Tabak, Michael A., Slootmaker, Chris, Robeson, Michael S., Miller, Ryan S., Bosse, Mirte, Megens, Hendrik‐Jan, Groenen, Martien A. M., Paiva, Samuel Rezende, Faria, Danielle Assis, Blackburn, Harvey D., Schmit, Brandon S., Piaggio, Antoinette J.
Published in Molecular ecology (01.03.2020)
Published in Molecular ecology (01.03.2020)
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Journal Article
Contrasting taxonomic stratification of microbial communities in two hypersaline meromictic lakes
Andrei, Adrian-Ştefan, Robeson, Michael S, Baricz, Andreea, Coman, Cristian, Muntean, Vasile, Ionescu, Artur, Etiope, Giuseppe, Alexe, Mircea, Sicora, Cosmin Ionel, Podar, Mircea, Banciu, Horia Leonard
Published in The ISME Journal (01.12.2015)
Published in The ISME Journal (01.12.2015)
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Journal Article
Enrichment of Root Endophytic Bacteria from Populus deltoides and Single-Cell-Genomics Analysis
Utturkar, Sagar M, Cude, W Nathan, Robeson, Jr, Michael S, Yang, Zamin K, Klingeman, Dawn M, Land, Miriam L, Allman, Steve L, Lu, Tse-Yuan S, Brown, Steven D, Schadt, Christopher W, Podar, Mircea, Doktycz, Mitchel J, Pelletier, Dale A
Published in Applied and environmental microbiology (15.09.2016)
Published in Applied and environmental microbiology (15.09.2016)
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Journal Article
Evaluation of DNA extraction protocols from liquid-based cytology specimens for studying cervical microbiota
Shibata, Takeo, Nakagawa, Mayumi, Coleman, Hannah N, Owens, Sarah M, Greenfield, William W, Sasagawa, Toshiyuki, Robeson, 2nd, Michael S
Published in PloS one (30.08.2021)
Published in PloS one (30.08.2021)
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Journal Article
Physiological and cognitive changes after treatments of cyclophosphamide, methotrexate, and fluorouracil: implications of the gut microbiome and depressive-like behavior
Corley, Christa, McElroy, Taylor, Sridharan, Bhavana, Trujillo, Madison, Simmons, Pilar, Kandel, Sangam, Sykes, Delawrence J, Robeson, 2nd, Michael S, Allen, Antiño R
Published in Frontiers in neuroscience (06.10.2023)
Published in Frontiers in neuroscience (06.10.2023)
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Journal Article
Global distribution of Polaromonas phylotypes--evidence for a highly successful dispersal capacity
Darcy, John L, Lynch, Ryan C, King, Andrew J, Robeson, Michael S, Schmidt, Steven K
Published in PloS one (29.08.2011)
Published in PloS one (29.08.2011)
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Journal Article
Microbial community composition and diversity in Caspian Sea sediments
Mahmoudi, Nagissa, Robeson, Michael S., Castro, Hector F., Fortney, Julian L., Techtmann, Stephen M., Joyner, Dominique C., Paradis, Charles J., Pfiffner, Susan M., Hazen, Terry C.
Published in FEMS microbiology ecology (01.01.2015)
Published in FEMS microbiology ecology (01.01.2015)
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Journal Article
Gut Microbes Are Associated with the Vascular Beneficial Effects of Dietary Strawberry on Metabolic Syndrome‐Induced Vascular Inflammation
Miller, James Coleman, Satheesh Babu, Adhini Kuppuswamy, Petersen, Chrissa, Wankhade, Umesh D., Robeson, Michael S., Putich, Madison Nicole, Mueller, Jennifer Ellen, O'Farrell, Aubrey Sarah, Cho, Jae Min, Chintapalli, Sree V., Jalili, Thunder, Symons, John David, Anandh Babu, Pon Velayutham
Published in Molecular nutrition & food research (01.11.2022)
Published in Molecular nutrition & food research (01.11.2022)
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Journal Article
Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups
Abram, Kaleb, Udaondo, Zulema, Bleker, Carissa, Wanchai, Visanu, Wassenaar, Trudy M., Robeson, Michael S., Ussery, David W.
Published in Communications biology (26.01.2021)
Published in Communications biology (26.01.2021)
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Journal Article
Characterizing microbial communities through space and time
Gonzalez, Antonio, King, Andrew, Robeson II, Michael S, Song, Sejin, Shade, Ashley, Metcalf, Jessica L, Knight, Rob
Published in Current opinion in biotechnology (01.06.2012)
Published in Current opinion in biotechnology (01.06.2012)
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Journal Article
Dispersal, niche breadth and population extinction: colonization ratios predict range size in North American dragonflies
McCauley, Shannon J, Davis, Christopher J, Werner, Earl E, Robeson, Michael S., II, Johansson, Frank
Published in The Journal of animal ecology (01.07.2014)
Published in The Journal of animal ecology (01.07.2014)
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Journal Article
Assessing the utility of metabarcoding for diet analyses of the omnivorous wild pig (Sus scrofa)
Robeson, Michael S., Khanipov, Kamil, Golovko, George, Wisely, Samantha M., White, Michael D., Bodenchuck, Michael, Smyser, Timothy J., Fofanov, Yuriy, Fierer, Noah, Piaggio, Antoinette J.
Published in Ecology and evolution (01.01.2018)
Published in Ecology and evolution (01.01.2018)
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Journal Article
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Bolyen, Evan, Dillon, Matthew R., Bokulich, Nicholas A., Abnet, Christian C., Al-Ghalith, Gabriel A., Alexander, Harriet, Alm, Eric J., Arumugam, Manimozhiyan, Asnicar, Francesco, Bai, Yang, Bisanz, Jordan E., Bittinger, Kyle, Brejnrod, Asker, Brislawn, Colin J., Brown, C. Titus, Callahan, Benjamin J., Caraballo-Rodríguez, Andrés Mauricio, Chase, John, Cope, Emily K., Da Silva, Ricardo, Diener, Christian, Dorrestein, Pieter C., Douglas, Gavin M., Durall, Daniel M., Duvallet, Claire, Edwardson, Christian F., Ernst, Madeleine, Estaki, Mehrbod, Fouquier, Jennifer, Gauglitz, Julia M., Gibbons, Sean M., Gibson, Deanna L., Gonzalez, Antonio, Gorlick, Kestrel, Guo, Jiarong, Hillmann, Benjamin, Holmes, Susan, Holste, Hannes, Huttenhower, Curtis, Huttley, Gavin A., Janssen, Stefan, Jarmusch, Alan K., Jiang, Lingjing, Kaehler, Benjamin D., Kang, Kyo Bin, Keefe, Christopher R., Keim, Paul, Kelley, Scott T., Knights, Dan, Kosciolek, Tomasz, Kreps, Jorden, Lee, Joslynn, Ley, Ruth, Liu, Yong-Xin, Loftfield, Erikka, Lozupone, Catherine, Maher, Massoud, Marotz, Clarisse, Martin, Bryan D., McDonald, Daniel, McIver, Lauren J., Melnik, Alexey V., Metcalf, Jessica L., Morgan, Sydney C., Naimey, Ahmad Turan, Navas-Molina, Jose A., Nothias, Louis Felix, Peoples, Samuel L., Petras, Daniel, Rasmussen, Lasse Buur, Rivers, Adam, Robeson, Michael S., Segata, Nicola, Shaffer, Michael, Shiffer, Arron, Sinha, Rashmi, Song, Se Jin, Spear, John R., Swafford, Austin D., Thompson, Luke R., Torres, Pedro J., Trinh, Pauline, Tripathi, Anupriya, Turnbaugh, Peter J., Ul-Hasan, Sabah, van der Hooft, Justin J. J., Vargas, Fernando, von Hippel, Max, Walters, William, Wan, Yunhu, Wang, Mingxun, Warren, Jonathan, Weber, Kyle C., Williamson, Charles H. D., Willis, Amy D., Zaneveld, Jesse R., Zhang, Yilong, Zhu, Qiyun, Knight, Rob, Caporaso, J. Gregory
Published in Nature biotechnology (01.08.2019)
Published in Nature biotechnology (01.08.2019)
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Journal Article