An integrative ENCODE resource for cancer genomics
Zhang, Jing, Lee, Donghoon, Dhiman, Vineet, Jiang, Peng, Xu, Jie, McGillivray, Patrick, Yang, Hongbo, Liu, Jason, Meyerson, William, Clarke, Declan, Gu, Mengting, Li, Shantao, Lou, Shaoke, Xu, Jinrui, Lochovsky, Lucas, Ung, Matthew, Ma, Lijia, Yu, Shan, Cao, Qin, Harmanci, Arif, Yan, Koon-Kiu, Sethi, Anurag, Gürsoy, Gamze, Schoenberg, Michael Rutenberg, Rozowsky, Joel, Warrell, Jonathan, Emani, Prashant, Yang, Yucheng T., Galeev, Timur, Kong, Xiangmeng, Liu, Shuang, Li, Xiaotong, Krishnan, Jayanth, Feng, Yanlin, Rivera-Mulia, Juan Carlos, Adrian, Jessica, Broach, James R, Bolt, Michael, Moran, Jennifer, Fitzgerald, Dominic, Dileep, Vishnu, Liu, Tingting, Mei, Shenglin, Sasaki, Takayo, Trevilla-Garcia, Claudia, Wang, Su, Wang, Yanli, Zang, Chongzhi, Wang, Daifeng, Klein, Robert J., Snyder, Michael, Gilbert, David M., Yip, Kevin, Cheng, Chao, Yue, Feng, Liu, X. Shirley, White, Kevin P., Gerstein, Mark
Published in Nature communications (29.07.2020)
Published in Nature communications (29.07.2020)
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Disentangling the Effects of Colocalizing Genomic Annotations to Functionally Prioritize Non-coding Variants within Complex-Trait Loci
Trynka, Gosia, Westra, Harm-Jan, Slowikowski, Kamil, Hu, Xinli, Xu, Han, Stranger, Barbara E., Klein, Robert J., Han, Buhm, Raychaudhuri, Soumya
Published in American journal of human genetics (02.07.2015)
Published in American journal of human genetics (02.07.2015)
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MiXcan: a framework for cell-type-aware transcriptome-wide association studies with an application to breast cancer
Song, Xiaoyu, Ji, Jiayi, Rothstein, Joseph H., Alexeeff, Stacey E., Sakoda, Lori C., Sistig, Adriana, Achacoso, Ninah, Jorgenson, Eric, Whittemore, Alice S., Klein, Robert J., Habel, Laurel A., Wang, Pei, Sieh, Weiva
Published in Nature communications (23.01.2023)
Published in Nature communications (23.01.2023)
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Identification of 31 loci for mammographic density phenotypes and their associations with breast cancer risk
Sieh, Weiva, Rothstein, Joseph H., Klein, Robert J., Alexeeff, Stacey E., Sakoda, Lori C., Jorgenson, Eric, McBride, Russell B., Graff, Rebecca E., McGuire, Valerie, Achacoso, Ninah, Acton, Luana, Liang, Rhea Y., Lipson, Jafi A., Rubin, Daniel L., Yaffe, Martin J., Easton, Douglas F., Schaefer, Catherine, Risch, Neil, Whittemore, Alice S., Habel, Laurel A.
Published in Nature communications (09.10.2020)
Published in Nature communications (09.10.2020)
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Modeling electrode polarization in dielectric spectroscopy: Ion mobility and mobile ion concentration of single-ion polymer electrolytes
Klein, Robert J, Zhang, Shihai, Dou, Shichen, Jones, Brad H, Colby, Ralph H, Runt, James
Published in The Journal of chemical physics (14.04.2006)
Published in The Journal of chemical physics (14.04.2006)
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Complement Factor H Polymorphism in Age-Related Macular Degeneration
Klein, Robert J, Zeiss, Caroline, Chew, Emily Y, Tsai, Jen-Yue, Sackler, Richard S, Haynes, Chad, Henning, Alice K, SanGiovanni, John Paul, Mane, Shrikant M, Mayne, Susan T, Bracken, Michael B, Ferris, Frederick L, Ott, Jurg, Barnstable, Colin, Hoh, Josephine
Published in Science (American Association for the Advancement of Science) (15.04.2005)
Published in Science (American Association for the Advancement of Science) (15.04.2005)
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Germline BRCA Mutations Denote a Clinicopathologic Subset of Prostate Cancer
GALLAGHER, David J, GAUDET, Mia M, ZELEFSKY, Michael, MORRIS, Michael J, SCHER, Howard I, KLEIN, Robert J, NORTON, Larry, EASTHAM, James A, SCARDINO, Peter T, ROBSON, Mark E, OFFIT, Kenneth, PAL, Prodipto, KIRCHHOFF, Tomas, BALISTRERI, Lisa, VORA, Kinjal, BHATIA, Jasmine, STADLER, Zsofia, FINE, Samson W, REUTER, Victor
Published in Clinical cancer research (01.04.2010)
Published in Clinical cancer research (01.04.2010)
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Novel ultra-rare exonic variants identified in a founder population implicate cadherins in schizophrenia
Lencz, Todd, Yu, Jin, Khan, Raiyan Rashid, Flaherty, Erin, Carmi, Shai, Lam, Max, Ben-Avraham, Danny, Barzilai, Nir, Bressman, Susan, Darvasi, Ariel, Cho, Judy H., Clark, Lorraine N., Gümüş, Zeynep H., Vijai, Joseph, Klein, Robert J., Lipkin, Steven, Offit, Kenneth, Ostrer, Harry, Ozelius, Laurie J., Peter, Inga, Malhotra, Anil K., Maniatis, Tom, Atzmon, Gil, Pe’er, Itsik
Published in Neuron (Cambridge, Mass.) (05.05.2021)
Published in Neuron (Cambridge, Mass.) (05.05.2021)
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Genome-Wide Association Studies of Cancer
STADLER, Zsofia K, THOM, Peter, ROBSON, Mark E, WEITZEL, Jeffrey N, KAUFF, Noah D, HURLEY, Karen E, DEVLIN, Vincent, GOLD, Bert, KLEIN, Robert J, OFFIT, Kenneth
Published in Journal of clinical oncology (20.09.2010)
Published in Journal of clinical oncology (20.09.2010)
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Genome-wide association study provides evidence for a breast cancer risk locus at 6q22.33
Gold, Bert, Kirchhoff, Tomas, Stefanov, Stefan, Lautenberger, James, Viale, Agnes, Garber, Judy, Friedman, Eitan, Narod, Steven, Olshen, Adam B, Gregersen, Peter, Kosarin, Kristi, Olsh, Adam, Bergeron, Julie, Ellis, Nathan A, Klein, Robert J, Clark, Andrew G, Norton, Larry, Dean, Michael, Boyd, Jeff, Offit, Kenneth
Published in Proceedings of the National Academy of Sciences - PNAS (18.03.2008)
Published in Proceedings of the National Academy of Sciences - PNAS (18.03.2008)
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A PSA SNP associates with cellular function and clinical outcome in men with prostate cancer
Srinivasan, Srilakshmi, Kryza, Thomas, Bock, Nathalie, Tse, Brian W. C., Sokolowski, Kamil A., Janaththani, Panchadsaram, Fernando, Achala, Moya, Leire, Stephens, Carson, Dong, Ying, Röhl, Joan, Alinezhad, Saeid, Vela, Ian, Perry-Keene, Joanna L., Buzacott, Katie, Nica, Robert, Gago-Dominguez, Manuela, Schleutker, Johanna, Maier, Christiane, Muir, Kenneth, Tangen, Catherine M., Gronberg, Henrik, Pashayan, Nora, Albanes, Demetrius, Wolk, Alicja, Stanford, Janet L., Berndt, Sonja I., Mucci, Lorelei A., Koutros, Stella, Cussenot, Olivier, Sorensen, Karina Dalsgaard, Grindedal, Eli Marie, Travis, Ruth C., Haiman, Christopher A., MacInnis, Robert J., Vega, Ana, Wiklund, Fredrik, Neal, David E., Kogevinas, Manolis, Penney, Kathryn L., Nordestgaard, Børge G., Brenner, Hermann, John, Esther M., Gamulin, Marija, Claessens, Frank, Melander, Olle, Dahlin, Anders, Stattin, Pär, Hallmans, Göran, Häggström, Christel, Johansson, Robert, Thysell, Elin, Rönn, Ann-Charlotte, Li, Weiqiang, Brown, Nigel, Dimeski, Goce, Shepherd, Benjamin, Dadaev, Tokhir, Brook, Mark N., Spurdle, Amanda B., Stenman, Ulf-Håkan, Koistinen, Hannu, Kote-Jarai, Zsofia, Klein, Robert J., Lilja, Hans, Ecker, Rupert C., Eeles, Rosalind, Clements, Judith, Batra, Jyotsna
Published in Nature communications (06.11.2024)
Published in Nature communications (06.11.2024)
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Examination of fully automated mammographic density measures using LIBRA and breast cancer risk in a cohort of 21,000 non-Hispanic white women
Habel, Laurel A, Alexeeff, Stacey E, Achacoso, Ninah, Arasu, Vignesh A, Gastounioti, Aimilia, Gerstley, Lawrence, Klein, Robert J, Liang, Rhea Y, Lipson, Jafi A, Mankowski, Walter, Margolies, Laurie R, Rothstein, Joseph H, Rubin, Daniel L, Shen, Li, Sistig, Adriana, Song, Xiaoyu, Villaseñor, Marvella A, Westley, Mark, Whittemore, Alice S, Yaffe, Martin J, Wang, Pei, Kontos, Despina, Sieh, Weiva
Published in Breast cancer research : BCR (06.08.2023)
Published in Breast cancer research : BCR (06.08.2023)
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Investigating the effects of indoor lighting on measures of brain health in older adults: protocol for a cross-over randomized controlled trial
Mazurek, Kevin A, Li, Linhao, Klein, Robert J, Rong, Shengliang, Mullan, Aidan F, Jones, David T, St Louis, Erik K, Worrell, Gregory A, Chen, Christina Y
Published in BMC geriatrics (11.10.2024)
Published in BMC geriatrics (11.10.2024)
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Genome-wide association study of prostate-specific antigen levels identifies novel loci independent of prostate cancer
Hoffmann, Thomas J., Passarelli, Michael N., Graff, Rebecca E., Emami, Nima C., Sakoda, Lori C., Jorgenson, Eric, Habel, Laurel A., Shan, Jun, Ranatunga, Dilrini K., Quesenberry, Charles P., Chao, Chun R., Ghai, Nirupa R., Aaronson, David, Presti, Joseph, Nordström, Tobias, Wang, Zhaoming, Berndt, Sonja I., Chanock, Stephen J., Mosley, Jonathan D., Klein, Robert J., Middha, Mridu, Lilja, Hans, Melander, Olle, Kvale, Mark N., Kwok, Pui-Yan, Schaefer, Catherine, Risch, Neil, Van Den Eeden, Stephen K., Witte, John S.
Published in Nature communications (31.01.2017)
Published in Nature communications (31.01.2017)
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Novel pedigree analysis implicates DNA repair and chromatin remodeling in multiple myeloma risk
Waller, Rosalie G, Darlington, Todd M, Wei, Xiaomu, Madsen, Michael J, Thomas, Alun, Curtin, Karen, Coon, Hilary, Rajamanickam, Venkatesh, Musinsky, Justin, Jayabalan, David, Atanackovic, Djordje, Rajkumar, S Vincent, Kumar, Shaji, Slager, Susan, Middha, Mridu, Galia, Perrine, Demangel, Delphine, Salama, Mohamed, Joseph, Vijai, McKay, James, Offit, Kenneth, Klein, Robert J, Lipkin, Steven M, Dumontet, Charles, Vachon, Celine M, Camp, Nicola J
Published in PLoS genetics (01.02.2018)
Published in PLoS genetics (01.02.2018)
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ImmuneRegulation: a web-based tool for identifying human immune regulatory elements
Kalayci, Selim, Selvan, Myvizhi Esai, Ramos, Irene, Cotsapas, Chris, Harris, Eva, Kim, Eun-Young, Montgomery, Ruth R, Poland, Gregory, Pulendran, Bali, Tsang, John S, Klein, Robert J, Gümüş, Zeynep H
Published in Nucleic acids research (02.07.2019)
Published in Nucleic acids research (02.07.2019)
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