Phase-type distributions in mathematical population genetics: An emerging framework
Hobolth, Asger, Rivas-González, Iker, Bladt, Mogens, Futschik, Andreas
Published in Theoretical population biology (01.06.2024)
Published in Theoretical population biology (01.06.2024)
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Pervasive incomplete lineage sorting illuminates speciation and selection in primates
Rivas-González, Iker, Rousselle, Marjolaine, Li, Fang, Zhou, Long, Dutheil, Julien Y, Munch, Kasper, Shao, Yong, Wu, Dongdong, Schierup, Mikkel H, Zhang, Guojie
Published in Science (American Association for the Advancement of Science) (02.06.2023)
Published in Science (American Association for the Advancement of Science) (02.06.2023)
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Incomplete lineage sorting and phenotypic evolution in marsupials
Feng, Shaohong, Bai, Ming, Rivas-González, Iker, Li, Cai, Liu, Shiping, Tong, Yijie, Yang, Haidong, Chen, Guangji, Xie, Duo, Sears, Karen E., Franco, Lida M., Gaitan-Espitia, Juan Diego, Nespolo, Roberto F., Johnson, Warren E., Yang, Huanming, Brandies, Parice A., Hogg, Carolyn J., Belov, Katherine, Renfree, Marilyn B., Helgen, Kristofer M., Boomsma, Jacobus J., Schierup, Mikkel Heide, Zhang, Guojie
Published in Cell (12.05.2022)
Published in Cell (12.05.2022)
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A region of suppressed recombination misleads neoavian phylogenomics
Mirarab, Siavash, Rivas-González, Iker, Feng, Shaohong, Stiller, Josefin, Fang, Qi, Mai, Uyen, Hickey, Glenn, Chen, Guangji, Brajuka, Nadolina, Fedrigo, Olivier, Formenti, Giulio, Wolf, Jochen B W, Howe, Kerstin, Antunes, Agostinho, Schierup, Mikkel H, Paten, Benedict, Jarvis, Erich D, Zhang, Guojie, Braun, Edward L
Published in Proceedings of the National Academy of Sciences - PNAS (09.04.2024)
Published in Proceedings of the National Academy of Sciences - PNAS (09.04.2024)
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PhaseTypeR: an R package for phase-type distributions in population genetics
Rivas-González, Iker, Andersen, Lars Nørvang, Hobolth, Asger
Published in Journal of open source software (21.02.2023)
Published in Journal of open source software (21.02.2023)
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Phylogenomic analyses provide insights into primate evolution
Shao, Yong, Zhou, Long, Li, Fang, Zhao, Lan, Zhang, Bao-Lin, Shao, Feng, Chen, Jia-Wei, Chen, Chun-Yan, Bi, Xupeng, Zhuang, Xiao-Lin, Zhu, Hong-Liang, Hu, Jiang, Sun, Zongyi, Li, Xin, Wang, Depeng, Rivas-González, Iker, Wang, Sheng, Wang, Yun-Mei, Chen, Wu, Li, Gang, Lu, Hui-Meng, Liu, Yang, Kuderna, Lukas F K, Farh, Kyle Kai-How, Fan, Peng-Fei, Yu, Li, Li, Ming, Liu, Zhi-Jin, Tiley, George P, Yoder, Anne D, Roos, Christian, Hayakawa, Takashi, Marques-Bonet, Tomas, Rogers, Jeffrey, Stenson, Peter D, Cooper, David N, Schierup, Mikkel Heide, Yao, Yong-Gang, Zhang, Ya-Ping, Wang, Wen, Qi, Xiao-Guang, Zhang, Guojie, Wu, Dong-Dong
Published in Science (American Association for the Advancement of Science) (02.06.2023)
Published in Science (American Association for the Advancement of Science) (02.06.2023)
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Journal Article
Complexity of avian evolution revealed by family-level genomes
Stiller, Josefin, Feng, Shaohong, Chowdhury, Al-Aabid, Rivas-González, Iker, Duchêne, David A, Fang, Qi, Deng, Yuan, Kozlov, Alexey, Stamatakis, Alexandros, Claramunt, Santiago, Nguyen, Jacqueline M T, Ho, Simon Y W, Faircloth, Brant C, Haag, Julia, Houde, Peter, Cracraft, Joel, Balaban, Metin, Mai, Uyen, Chen, Guangji, Gao, Rongsheng, Zhou, Chengran, Xie, Yulong, Huang, Zijian, Cao, Zhen, Yan, Zhi, Ogilvie, Huw A, Nakhleh, Luay, Lindow, Bent, Morel, Benoit, Fjeldså, Jon, Hosner, Peter A, da Fonseca, Rute R, Petersen, Bent, Tobias, Joseph A, Székely, Tamás, Kennedy, Jonathan David, Reeve, Andrew Hart, Liker, Andras, Stervander, Martin, Antunes, Agostinho, Tietze, Dieter Thomas, Bertelsen, Mads F, Lei, Fumin, Rahbek, Carsten, Graves, Gary R, Schierup, Mikkel H, Warnow, Tandy, Braun, Edward L, Gilbert, M Thomas P, Jarvis, Erich D, Mirarab, Siavash, Zhang, Guojie
Published in Nature (London) (23.05.2024)
Published in Nature (London) (23.05.2024)
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Journal Article
Complexity of avian evolution revealed by family-level genomes
Stiller, Josefin, Feng, Shaohong, Chowdhury, Al-aabid, Rivas-González, Iker, Duchêne, David A, Fang, Qi, Deng, Yuan, Kozlov, Alexey, Stamatakis, Alexandros, Claramunt, Santiago, Nguyen, Jacqueline M T, Ho, Simon Y W, Faircloth, Brant C, Haag, Julia, Houde, Peter, Cracraft, Joel, Balaban, Metin, Mai, Uyen, Chen, Guangji, Gao, Rongsheng, Zhou, Chengran, Xie, Yulong, Huang, Zijian, Cao, Zhen, Yan, Zhi, Ogilvie, Huw A, Nakhleh, Luay, Lindow, Bent, Morel, Benoit, Fjeldså, Jon, Hosner, Peter A, da Fonseca, Rute R, Petersen, Bent, Tobias, Joseph A, Székely, Tamás, Kennedy, Jonathan David, Reeve, Andrew Hart, Liker, Andras, Stervander, Martin, Antunes, Agostinho, Tietze, Dieter Thomas, Bertelsen, Mads F, Lei, Fumín, Rahbek, Carsten, Graves, Gary R, Schierup, Mikkel H, Warnow, Tandy, Braun, Edward L, Gilbert, M Thomas P, Jarvis, Erich D, Mirarab, Siavash, Zhang, Guojie
Published in Nature (London) (23.05.2024)
Published in Nature (London) (23.05.2024)
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Journal Article
Complete sequencing of ape genomes
Yoo, DongAhn, Rhie, Arang, Hebbar, Prajna, Logsdon, Glennis A, Solar, Steven J, Antipov, Dmitry, Pickett, Brandon D, Safonova, Yana, Luo, Yanting, Malukiewicz, Joanna, Storer, Jessica M, Lin, Jiadong, Mangan, Riley J, Anez, Graciela Monfort, Balachandran, Parithi, Bankevich, Anton, Beck, Christine R, Biddanda, Arjun, Borchers, Matthew, Bouffard, Gerard G, Brannan, Emry, Brooks, Shelise Y, Crawford, Juyun, Diekhans, Mark, Engelbrecht, Eric, Feschotte, Cedric, menti, Giulio, de Gennaro, Luciana, Gilbert, David, Green, Richard E, Guarracino, Andrea, Gupta, Ishaan, Haddad, Diana, Han, Junmin, Harris, Robert S, Hartley, Gabrielle A, Harvey, William T, Hiller, Michael, Hoekzema, Kendra, Houck, Marlys L, Kamali, Kaivan, Lee, Youngho, Lees, William, Li, Qiuhui, Loh, Yong Hwee Eddie, Loucks, Hailey, Ma, Jian, Mao, Yafei, Martinez, Juan F I, Masterson, Patrick, McGrath, Barbara, McKinney, Sean, Meyer, Britta S, Miga, Karen H, Mohanty, Saswat K, Munson, Katherine M, Pal, Karol, Pennell, Matt, Pevzner, Pavel A, Potapova, Tamara, Ringeling, Francisca R, Rocha, Joana L, Ryder, Oliver A, Sacco, Samuel, Saha, Swati, Sasaki, Takayo, Schatz, Michael C, Schork, Nicholas J, Shanks, Cole, Son, Dongmin R, Steiner, Cynthia, Sweeten, Alexander P, Tassia, Michael G, Thibaud-Nissen, Françoise, Torres-González, Edmundo, Trivedi, Mihir, Wertz, Julie, Yang, Muyu, Zhang, Panpan, Zhang, Shilong, Zhang, Yang, Zhao, Sarah A, Jarvis, Erich D, Rivas-González, Iker, Paten, Benedict, Szpiech, Zachary A, Huber, Christian D, Lenz, Tobias L, Konkel, Miriam K, Yi, Soojin V, Canzar, Stefan, Sudmant, Peter H, Molloy, Erin, Garrison, Erik, Lowe, Craig B, Ventura, Mario, O'Neill, Rachel J, Koren, Sergey, Makova, Kateryna D, Phillippy, Adam M
Published in bioRxiv (31.07.2024)
Published in bioRxiv (31.07.2024)
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