Defining the core Arabidopsis thaliana root microbiome
Lundberg, Derek S., Lebeis, Sarah L., Paredes, Sur Herrera, Yourstone, Scott, Gehring, Jase, Malfatti, Stephanie, Tremblay, Julien, Engelbrektson, Anna, Kunin, Victor, Rio, Tijana Glavina del, Edgar, Robert C., Eickhorst, Thilo, Ley, Ruth E., Hugenholtz, Philip, Tringe, Susannah Green, Dangl, Jeffery L.
Published in Nature (London) (02.08.2012)
Published in Nature (London) (02.08.2012)
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Journal Article
Ecophysiology of Freshwater Verrucomicrobia Inferred from Metagenome-Assembled Genomes
He, Shaomei, Stevens, Sarah L R, Chan, Leong-Keat, Bertilsson, Stefan, Glavina Del Rio, Tijana, Tringe, Susannah G, Malmstrom, Rex R, McMahon, Katherine D
Published in mSphere (01.09.2017)
Published in mSphere (01.09.2017)
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Journal Article
Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa
Lebeis, Sarah L., Paredes, Sur Herrera, Lundberg, Derek S., Breakfield, Natalie, Gehring, Jase, McDonald, Meredith, Malfatti, Stephanie, del Rio, Tijana Glavina, Jones, Corbin D., Tringe, Susannah G., Dangl, Jeffery L.
Published in Science (American Association for the Advancement of Science) (21.08.2015)
Published in Science (American Association for the Advancement of Science) (21.08.2015)
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Journal Article
Large-scale replicated field study of maize rhizosphere identifies heritable microbes
Walters, William A., Jin, Zhao, Youngblut, Nicholas, Wallace, Jason G., Sutter, Jessica, Zhang, Wei, González-Peña, Antonio, Peiffer, Jason, Koren, Omry, Shi, Qiaojuan, Knight, Rob, del Rio, Tijana Glavina, Tringe, Susannah G., Buckler, Edward S., Dangl, Jeffery L., Ley, Ruth E.
Published in Proceedings of the National Academy of Sciences - PNAS (10.07.2018)
Published in Proceedings of the National Academy of Sciences - PNAS (10.07.2018)
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Journal Article
In marine Bacteroidetes the bulk of glycan degradation during algae blooms is mediated by few clades using a restricted set of genes
Krüger, Karen, Chafee, Meghan, Ben Francis, T., Glavina del Rio, Tijana, Becher, Dörte, Schweder, Thomas, Amann, Rudolf I., Teeling, Hanno
Published in The ISME Journal (01.11.2019)
Published in The ISME Journal (01.11.2019)
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Journal Article
Taxonomic distribution of metabolic functions in bacteria associated with Trichodesmium consortia
Koedooder, Coco, Zhang, Futing, Wang, Siyuan, Basu, Subhajit, Haley, Sheean T, Tolic, Nikola, Nicora, Carrie D, Glavina Del Rio, Tijana, Dyhrman, Sonya T, Gledhill, Martha, Boiteau, Rene M, Rubin-Blum, Maxim, Shaked, Yeala
Published in mSystems (21.12.2023)
Published in mSystems (21.12.2023)
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Journal Article
Phage-specific metabolic reprogramming of virocells
Howard-Varona, Cristina, Lindback, Morgan M., Bastien, G. Eric, Solonenko, Natalie, Zayed, Ahmed A., Jang, HoBin, Andreopoulos, Bill, Brewer, Heather M., Glavina del Rio, Tijana, Adkins, Joshua N., Paul, Subhadeep, Sullivan, Matthew B., Duhaime, Melissa B.
Published in The ISME Journal (01.04.2020)
Published in The ISME Journal (01.04.2020)
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Journal Article
Peatland Acidobacteria with a dissimilatory sulfur metabolism
Hausmann, Bela, Pelikan, Claus, Herbold, Craig W., Köstlbacher, Stephan, Albertsen, Mads, Eichorst, Stephanie A., Glavina del Rio, Tijana, Huemer, Martin, Nielsen, Per H., Rattei, Thomas, Stingl, Ulrich, Tringe, Susannah G., Trojan, Daniela, Wentrup, Cecilia, Woebken, Dagmar, Pester, Michael, Loy, Alexander
Published in The ISME Journal (01.07.2018)
Published in The ISME Journal (01.07.2018)
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Journal Article
Consortia of low-abundance bacteria drive sulfate reduction-dependent degradation of fermentation products in peat soil microcosms
Hausmann, Bela, Knorr, Klaus-Holger, Schreck, Katharina, Tringe, Susannah G, Glavina del Rio, Tijana, Loy, Alexander, Pester, Michael
Published in The ISME Journal (01.10.2016)
Published in The ISME Journal (01.10.2016)
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Journal Article
Metagenomic Profiling Reveals Lignocellulose Degrading System in a Microbial Community Associated with a Wood-Feeding Beetle
Scully, Erin D, Geib, Scott M, Hoover, Kelli, Tien, Ming, Tringe, Susannah G, Barry, Kerrie W, Glavina del Rio, Tijana, Chovatia, Mansi, Herr, Joshua R, Carlson, John E, Oliveira, Pedro Lagerblad
Published in PloS one (04.09.2013)
Published in PloS one (04.09.2013)
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Journal Article
Comparative genomics of two ‘Candidatus Accumulibacter’ clades performing biological phosphorus removal
Flowers, Jason J, He, Shaomei, Malfatti, Stephanie, del Rio, Tijana Glavina, Tringe, Susannah G, Hugenholtz, Philip, McMahon, Katherine D
Published in The ISME Journal (01.12.2013)
Published in The ISME Journal (01.12.2013)
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Journal Article
Patterns in wetland microbial community composition and functional gene repertoire associated with methane emissions
He, Shaomei, Malfatti, Stephanie A, McFarland, Jack W, Anderson, Frank E, Pati, Amrita, Huntemann, Marcel, Tremblay, Julien, Glavina del Rio, Tijana, Waldrop, Mark P, Windham-Myers, Lisamarie, Tringe, Susannah G
Published in mBio (19.05.2015)
Published in mBio (19.05.2015)
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Journal Article
Convergent bacterial microbiotas in the fungal agricultural systems of insects
Aylward, Frank O, Suen, Garret, Biedermann, Peter H W, Adams, Aaron S, Scott, Jarrod J, Malfatti, Stephanie A, Glavina del Rio, Tijana, Tringe, Susannah G, Poulsen, Michael, Raffa, Kenneth F, Klepzig, Kier D, Currie, Cameron R
Published in mBio (18.11.2014)
Published in mBio (18.11.2014)
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Journal Article
Major changes in microbial diversity and community composition across gut sections of a juvenile Panchlora cockroach
Gontang, Erin A, Aylward, Frank O, Carlos, Camila, Glavina Del Rio, Tijana, Chovatia, Mansi, Fern, Alison, Lo, Chien-Chi, Malfatti, Stephanie A, Tringe, Susannah G, Currie, Cameron R, Kolter, Roberto
Published in PloS one (18.05.2017)
Published in PloS one (18.05.2017)
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Journal Article
Trichodesmium genome maintains abundant, widespread noncoding DNA in situ, despite oligotrophic lifestyle
Walworth, Nathan, Pfreundt, Ulrike, Nelson, William C, Mincer, Tracy, Heidelberg, John F, Fu, Feixue, Waterbury, John B, Glavina del Rio, Tijana, Goodwin, Lynne, Kyrpides, Nikos C, Land, Miriam L, Woyke, Tanja, Hutchins, David A, Hess, Wolfgang R, Webb, Eric A
Published in Proceedings of the National Academy of Sciences - PNAS (07.04.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (07.04.2015)
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Journal Article
A metagenomic insight into freshwater methane-utilizing communities and evidence for cooperation between the Methylococcaceae and the Methylophilaceae
Beck, David A C, Kalyuzhnaya, Marina G, Malfatti, Stephanie, Tringe, Susannah G, Glavina Del Rio, Tijana, Ivanova, Natalia, Lidstrom, Mary E, Chistoserdova, Ludmila
Published in PeerJ (San Francisco, CA) (19.02.2013)
Published in PeerJ (San Francisco, CA) (19.02.2013)
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Journal Article
Sodalis ligni Strain 159R Isolated from an Anaerobic Lignin-Degrading Consortium
Chaput, Gina, Ford, Jacob, DeDiego, Lani, Narayanan, Achala, Tam, Wing Yin, Whalen, Meghan, Huntemann, Marcel, Clum, Alicia, Spunde, Alex, Pillay, Manoj, Palaniappan, Krishnaveni, Varghese, Neha, Mikhailova, Natalia, Chen, I-Min, Stamatis, Dimitrios, Reddy, T B K, O'Malley, Ronan, Daum, Chris, Shapiro, Nicole, Ivanova, Natalia, Kyrpides, Nikos C, Woyke, Tanja, Glavina Del Rio, Tijana, DeAngelis, Kristen M
Published in Microbiology spectrum (29.06.2022)
Published in Microbiology spectrum (29.06.2022)
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Journal Article
Genomes of Three Methylotrophs from a Single Niche Reveal the Genetic and Metabolic Divergence of the Methylophilaceae
LAPIDUS, Alla, CLUM, Alicia, LUCAS, Susan, LIDSTROM, Mary E, IVANOVA, Natalia, CHISTOSERDOVA, Ludmila, LABUTTI, Kurt, KALUZHNAYA, Marina G, LIM, Sujung, BECK, David A. C, GLAVINA DEL RIO, Tijana, NOLAN, Matt, MAVROMATIS, Konstantinos, HUNTEMANN, Marcel
Published in Journal of Bacteriology (01.08.2011)
Published in Journal of Bacteriology (01.08.2011)
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Journal Article
Genome Sequence of Chthoniobacter flavus Ellin428, an Aerobic Heterotrophic Soil Bacterium
KANT, Ravi, VAN PASSEL, Mark W. J, PITLUCK, Sam, LARIMER, Frank W, LAND, Miriam L, HAUSER, Loren, SANGWAN, Parveen, DE VOS, Willem M, JANSSEN, Peter H, SMIDT, Hauke, PALVA, Airi, LUCAS, Susan, LAPIDUS, Alia, DEL RIO, Tijana Glavina, DALIN, Eileen, TICE, Hope, BRUCE, David, GOODWIN, Lynne
Published in Journal of Bacteriology (01.06.2011)
Published in Journal of Bacteriology (01.06.2011)
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Journal Article